KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:53 2014 Check: 00 .. Name: bmy_08716T0/1-498 Len: 636 Check: 7345 Weight: 1.00 Name: BACU017037/1-325 Len: 636 Check: 160 Weight: 1.00 Name: ENSP00000295131/1-633 Len: 636 Check: 8944 Weight: 1.00 Name: ENSBTAP00000009973/1-634 Len: 636 Check: 1976 Weight: 1.00 Name: ENSTTRP00000016430/1-550 Len: 636 Check: 4661 Weight: 1.00 // 1 50 bmy_08716T0/1-498 MLRGGCKASE RRRHFSDRLS WQQDQALSSS IYLLREMGPT SFLLREEEPE BACU017037/1-325 MLRGGCKASE RRRRFSDRLS WQQDQALSSS IYLLREMGPT SFLLREEEPE ENSP00000295131/1-633 MLRRGYKASE RRRHLSERLS WHQDQALSSS IYLLREMGPT GFLLREEEPE ENSBTAP00000009973/1-634 MLRGGCKASE RRKHLIDRLS WQQDQALSSS IYLLREMGPT AFLLREEEPE ENSTTRP00000016430/1-550 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_08716T0/1-498 NRDFRVSLGN PHVCNCSIFL KGGELCKHIC WLENRYW--- ---------- BACU017037/1-325 NRDFR----- ---------- ---------- ---------- ---------- ENSP00000295131/1-633 YMDFRVFLGN PHVCNCSTFP KGGELCKHIC WVLLKKFKLP RNHESALQLG ENSBTAP00000009973/1-634 NRDFRVSLGN PHVCNCSTFL KGGELCKHIC WVLLKKFRLP RNHESALQLG ENSTTRP00000016430/1-550 ---------- ---------- ---------- -VLLKKFRLP RNHESALQLG 101 150 bmy_08716T0/1-498 ---------- ---------- ---------- ---------- ---------- BACU017037/1-325 ---------- ---------- ---------- ---------- ---------- ENSP00000295131/1-633 LGEREISDLL RGIHRVQTPQ PGTNDENEHV EEDGYIKQKE IDSEDICSIC ENSBTAP00000009973/1-634 LVEREINGLL QGIHRVQTPQ REMNNENAQT EEDGYIKQKE IGSDDICSIC ENSTTRP00000016430/1-550 LVEREISDLL RGIHRVQTPQ QGRNNENAQI EEDGYIKQKE ISSDDICSIC 151 200 bmy_08716T0/1-498 --LYLGKFIP PNYYITPMCS CIDIN----- ---------- ---------- BACU017037/1-325 ---------- ---------- ---------- ---------- ---------- ENSP00000295131/1-633 QELLLEKKLP VTFCRFGCGN SIHIKCMKIL ANYQST-SNT SMLKCPLCRK ENSBTAP00000009973/1-634 QEVLLEKKLP VTFCRFGCGN SVHIKCMKIL ANYQDVPLNS SMLKCPLCRK ENSTTRP00000016430/1-550 QEVLLEKKVP VTFCRFGCGN SVHIKCMKIL ANYQDKVSHT SMLKCPLCRK 201 250 bmy_08716T0/1-498 ---------- ---------- ---------- ---------- -------RRC BACU017037/1-325 ---------- ---------- ---------- ---------- ---------- ENSP00000295131/1-633 EFAPLKLILE EFKNSSKLVA AAEKERLDKH LGIPCNNCKQ FPIEGKCYKC ENSBTAP00000009973/1-634 DFGPLNLILE EFKNSNKLVT AAEKERLDKH LGIPCNNCQQ FPLEGKCYKC ENSTTRP00000016430/1-550 DFAPLKLILE EFKNSSKLVA TAEKERLDKH LGIPCNNCRQ FPVEGKCYKC 251 300 bmy_08716T0/1-498 TKCIEYHLCQ DCFDSCCHLS HSFTFREKRN QKWRSLEKRS DETVKYIDIK BACU017037/1-325 ---------- ---------- ---------- ---------- ---------- ENSP00000295131/1-633 TECIEYHLCQ ECFDSCCHLS HTFTFREKRN QKWRSLEKRA DEVVKYIDTK ENSBTAP00000009973/1-634 TKCIEYHLCQ DCFDSCCHLS HSFMFREKRN QKWRSLGKRS DKTVKYVDIK ENSTTRP00000016430/1-550 TKCIEYHLCQ NCFDSCCHLS HSFTFREKRN QKWRSLEKRS DETVKYIDIK 301 350 bmy_08716T0/1-498 NEI-EKMPHF QEKQGQVYTP KHVVRSLPLL LITKNSKLLA PGYQCRLCLK BACU017037/1-325 ---------- ---------- ---------- ---------- ---------- ENSP00000295131/1-633 NEIEEKMSHF QEKQGQVYTP KHIVRSLPLQ LITKNSKLLA PGYQCLLCLK ENSBTAP00000009973/1-634 DEIEEKMPHF QEKQDQIYTP KHVVKSLPLF LITKNSKLLA PGYQCRLCLK ENSTTRP00000016430/1-550 DEI-EKMPHF QEKQGQVYTP KHVVRSLPLL LITKNSKLLA PGYQCRLCLK 351 400 bmy_08716T0/1-498 AFHPGQHTRL LPCTHKFHRK CIDSWLLHKC NSCPIDGQVI YNPLIWKDRA BACU017037/1-325 ---------- ------FHRK CIDSWLLHKC NSCPIDGQVI YNPLIWKDRA ENSP00000295131/1-633 AFHLGQHTRL LPCTHKFHRK CIDNWLFHKC NSCPIDGQVI YNPLTWKNSA ENSBTAP00000009973/1-634 AFRRGQHTRQ LPCTHKFHRK CIDSWLLYKC NSCPIDGQVI YNPLIWNDRA ENSTTRP00000016430/1-550 AFCPGQHTRL LPCTHKFHRK CIDSWLLHKC NSCPVDGQVI YNPLIWKDRA 401 450 bmy_08716T0/1-498 VNGHAHQSVS NTNITHLSKQ EEPELFIPGT GLVLKQNGLG ILPIIPQXNS BACU017037/1-325 VNGHAHQSVS NTNITHLSKQ EEPELFIPGT GLVLKQNGLG ILPIIPQRNS ENSP00000295131/1-633 VNGQAHQSVS NRDIIHLSKQ KEPDLFIPGT GLVLKQNRLG ILPSIPQCNF ENSBTAP00000009973/1-634 VNGHVHHSVS NTDVTHLPKQ EESELFIPGT GLVLKQNKPG ILPILPQRNS ENSTTRP00000016430/1-550 VNGHAHQSVS NTNIIHLSKQ EEPELFIPGT GLVLKQNGLG ILPIIPQRNS 451 500 bmy_08716T0/1-498 EKLNTPQSPI DTYQNITIDD LYSVKVDDSN SRKSIYEYKI SQHFPSCLQD BACU017037/1-325 EKLNTPQSPI DTYQNITIDD LYSVKVDDSN SRKSIYEYKI SQHFPSYLQD ENSP00000295131/1-633 DELNTPQSPK DAYENTTIDN LCSIKLDNSN SKKLTYDYKI SQHFPRYLQD ENSBTAP00000009973/1-634 EKLNTPQSPN DTYQNITIDN LYSIKLDDSN SRKSIYECKS NQHFPSYLQD ENSTTRP00000016430/1-550 EKLNAPQSPI DTYQNITIDD LYSVKVDDSN SRKSIYEYKI SQHFPSYLQD 501 550 bmy_08716T0/1-498 LPTGSFGKIS PQTFFPSIDH KNIIYPTGVE NPCISKKHHA GQSQKINKDC BACU017037/1-325 LPTGSFEKIS SQTFFPSIDH KSIIYPTGVE NPCISKKHHA GQSQKINKDC ENSP00000295131/1-633 LPTVSFGKIP SQTLLPPIVH KNIVCPTAME SPCISGKFHT SLS-RMTKGC ENSBTAP00000009973/1-634 LPTGSFGKTS SQTLFPSIDH KNIIHLTERK NPCINKKHHT NQSQKMNKSC ENSTTRP00000016430/1-550 LPTGSFGKIS SQTFFPSIDH K-IIYPTGAE -PCIS-KHHA SQS-QXXXXX 551 600 bmy_08716T0/1-498 KRVNHNSKKT LGNKIREDNT RPNTLLPEDL NLIVNRXTTK LSLSKRYNNC BACU017037/1-325 KRVNHNSKKT LGNKIREDNT RPNTLLPEDL NLIVNRGTTK LSLSKRYNNC ENSP00000295131/1-633 KCNNHNLKKT PATKIREDNK R-STLLPEDF NLIVNWSTAK LSLSKRYSNC ENSBTAP00000009973/1-634 KGTNHKSKKI LGNKVREDNT RSNTLLP-DL SLIVSWGTTK LSLSKRY-NC ENSTTRP00000016430/1-550 XXXXXXXXXT LGNKVREDNT RPNTLLPEDL NLIVNWGTAK LSLSKRYNKC 601 650 bmy_08716T0/1-498 MGKIRPKCSH LSRRPISHPL STKSTELSLI LEGVQL BACU017037/1-325 TGKIRPKCSH LSRRPISHPL STKSTELSLI LEGVQL ENSP00000295131/1-633 MGEITRKCSH LSRQPVSHSV NTKSTELSLI IEGVQL ENSBTAP00000009973/1-634 MGKIRPKCSH LSRRPVSHPL NTKSPELSLI LEGVHL ENSTTRP00000016430/1-550 MGKIRPKCND LSRRPISHPL STKSTELSLI LEGVQL