KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:53 2014 Check: 00 .. Name: ENSP00000304501/1-332 Len: 531 Check: 2374 Weight: 1.00 Name: ENSTTRP00000001895/1-315 Len: 531 Check: 25 Weight: 1.00 Name: ENSBTAP00000009974/1-332 Len: 531 Check: 3478 Weight: 1.00 Name: BACU005241/1-382 Len: 531 Check: 9863 Weight: 1.00 Name: bmy_10705T0/1-373 Len: 531 Check: 8795 Weight: 1.00 // 1 50 ENSP00000304501/1-332 ---------- ---MLLE-TQ DALYVALELV IAALSVAGNV LVCAAVGTAN ENSTTRP00000001895/1-315 ---------- ---MPLELTQ AALYVVLELA LAALAVAGNV LVCAAVGASS ENSBTAP00000009974/1-332 ---------- ---MPLE-AQ DAVYVALELA LAALSVTGNV LVCAAVGTSS BACU005241/1-382 ---------- ---------- ---------- ---------- ---------- bmy_10705T0/1-373 MGEESGAHHP PVRCQRPRGS CPQPPARHGD TGLLSPASLA VSHPCPGPGS 51 100 ENSP00000304501/1-332 TLQTPTNYFL VSLAAADVAV GLFAIPFAIT ISLGFCTDFY GCLFLACFVL ENSTTRP00000001895/1-315 ALQTPTNYFL VSLAAADVAV GLFAIPFAVT ISLGFCTDFH SCLFLACFVL ENSBTAP00000009974/1-332 ALQTPTNYFL VSLAAADVAV GLFAIPFAVT ISLGFCTDFH SCLFLACFVL BACU005241/1-382 ---------- ---------- ---------M SSLG------ ---------- bmy_10705T0/1-373 ISQTRTVLPS WGCSSSAKSA SAFGAHVLLW VWLCPPTEAS RCRLLRTACR 101 150 ENSP00000304501/1-332 VLTQSSIFSL LAVAVDRYLA ICVPLR---- ---------- ---------- ENSTTRP00000001895/1-315 VVTQSSIFSL LAVAVDRYLA VRVPLR---- ---------- ---------- ENSBTAP00000009974/1-332 VLTQSSIFSL LAVAVDRYLA VRVPLR---- ---------- ---------- BACU005241/1-382 ---------- ---------- ----GR---- ---------- ---------- bmy_10705T0/1-373 AGSRG--LCR FPRGWPRSWG RRIPGTAGSF GQGRGQQIQG WGSGQLGALH 151 200 ENSP00000304501/1-332 -----YKSLV TGTRARGVIA VLWVLAFGIG LTPFLGWNSK DSATNNCTEP ENSTTRP00000001895/1-315 -----YRSLV TGARARGVIA VLWILALGIG LTPFLGWNSK DRAA-NCTEP ENSBTAP00000009974/1-332 -----YKSLV TGARARGVIA ALWVLAFGIG LTPFLGWNDR KIAT-NCTEP BACU005241/1-382 -----YKGLV TGARARRVIA VLWVLAFGIG LTPFLGWNRK DSAT-NCTEP bmy_10705T0/1-373 NLRGLYKGLV TGARARGVIA VLWVLAFGIG LTPFLGWNSK DSAT-NCTEP 201 250 ENSP00000304501/1-332 WDGTTNESCC LVKCLFENVV PMSYMVYFNF FGCVLPPLLI MLVIYIKIFL ENSTTRP00000001895/1-315 WDGTTNASCC LVKCLFENVV PMSYMVYFNF FGCVLPPLLI MLVIYVKIFL ENSBTAP00000009974/1-332 GDAATNVSCC LIRCLFENVV PMSYMVYFNF FGCVLPPLLI MLVIYVKIFL BACU005241/1-382 WDGATNASCC LGRCLSENVV PMSYTVRSSP FGCVLPPLLG MLVLYLKIFL bmy_10705T0/1-373 WDGTTNASCC LVKCLFENVV PMSYMVYFNF FGCVLPPLLI MLVIYVKIFL 251 300 ENSP00000304501/1-332 VACRQLQRTE LMDHSRTTLQ REIHAAKSLA MIVGIFALCW LPVHAVNCVT ENSTTRP00000001895/1-315 VACRQLRRME LVGHSRTVLQ REVHAAKSLA MIVGIFALCW LPVHAINCAS ENSBTAP00000009974/1-332 VACRQLQRTE LMDHSRTVLQ REIHAAKSLA LIVGIFALCW LPVHTINCAS BACU005241/1-382 VACRQLQRVE LMDHSRTVLQ RGVHAAKSLA VIVGIFALCW LPVHAINCAT bmy_10705T0/1-373 VACRQLQRME LMDHSRTILQ REIHAAKSLA VIVGIFALCW LPVHAINCVT 301 350 ENSP00000304501/1-332 LFQPAQGKNK PKWAMNMAIL LSHANSVVNP IVYAYRNRDF RYTFHKIIS- ENSTTRP00000001895/1-315 LFQPGWAKEK PKWAMNTAIL LSHANSVVNP IVYAYRNQDF RYTFHKIIS- ENSBTAP00000009974/1-332 LFQPTWAKVK PKWAINTAIL LSHANSAVNP IVYAYRNRDF RYTFHKIIS- BACU005241/1-382 LFQPAWAKEK PKWAMNTAIL LSHANSVVNP IVYAYRNRDF RYAFHQVISR bmy_10705T0/1-373 LFQPAWAKEK PKWAMNTAIL LSHANSVVNP IVYAYRNRDF RYTFHQIIS- 351 400 ENSP00000304501/1-332 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001895/1-315 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009974/1-332 ---------- ---------- ---------- ---------- ---------- BACU005241/1-382 QELALAGYEF CISTLEEKIE REKELSEDTL SVEEKANTHL LLGMCLDTYA bmy_10705T0/1-373 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000304501/1-332 RYLL------ ---------- ---------- ---------- ---------- ENSTTRP00000001895/1-315 RYVL------ ---------- ---------- ---------- ---------- ENSBTAP00000009974/1-332 RYIL------ ---------- ---------- ---------- ---------- BACU005241/1-382 RYLLFSKQPS QAQRMYEKAL QISEEILGER HPQTIVLLSD LAASLDVQGR bmy_10705T0/1-373 RYVL------ ---------- ---------- ---------- ---------- 451 500 ENSP00000304501/1-332 ----CQADV- KSGNGQAGVQ PALGVGL--- ---------- ---------- ENSTTRP00000001895/1-315 ----CRTDV- ---------- ---------- ---------- ---------- ENSBTAP00000009974/1-332 ----CRTHIL KSGEGQVGSQ PTLQLGL--- ---------- ---------- BACU005241/1-382 SDEACVHAQR ASDLARQGEH PELHVLLRNL AAVLTHGERY AQAEEVYQEA bmy_10705T0/1-373 ----CRTDVR KSGDGQAGAQ PALQVGL--- ---------- ---------- 501 550 ENSP00000304501/1-332 ---------- ---------- ---------- - ENSTTRP00000001895/1-315 ---------- ---------- ---------- - ENSBTAP00000009974/1-332 ---------- ---------- ---------- - BACU005241/1-382 LKRAKLKRDE VSVQHIREEL AELSRKSRPV S bmy_10705T0/1-373 ---------- ---------- ---------- -