KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:57 2014 Check: 00 .. Name: ENSP00000355140/1-301 Len: 302 Check: 458 Weight: 1.00 Name: ENSBTAP00000009997/1-302 Len: 302 Check: 3181 Weight: 1.00 Name: bmy_09809T0/1-298 Len: 302 Check: 327 Weight: 1.00 Name: BACU006389/1-298 Len: 302 Check: 327 Weight: 1.00 Name: ENSTTRP00000011607/1-298 Len: 302 Check: 1098 Weight: 1.00 // 1 50 ENSP00000355140/1-301 MDYNRMNSFL EYPLCNRGPS AYSAHSAPTS FPPSSAQAVD SYASEGRYGG ENSBTAP00000009997/1-302 MDYNRMNSFL EYPLCNRGPS AYSAHSAPTS FPSSSASAVD SYAGETRYGG bmy_09809T0/1-298 MDYNRMNSFL EYPLCNRAPS AY---SAPTS FPPSSAPSVD SYAGETRYGG BACU006389/1-298 MDYNRMNSFL EYPLCNRAPS AY---SAPTS FPPSSAPSVD SYAGETRYGG ENSTTRP00000011607/1-298 MDYNRMNSFL EYPLCNRAPS AY---SAPTS FPPSSAPSVD SYAGETRYGG 51 100 ENSP00000355140/1-301 GLSSPAFQQN SGYPAQQPPS TLGVPFPSSA PSGYAPAACS PSYGPSQYYP ENSBTAP00000009997/1-302 GLPSSALQQN SGYLAQQPPS ALGVPFPSSA TSGYSPAACS ASYGSSQYYP bmy_09809T0/1-298 GLPSPALQQN SGYPAQHPPS ALGVPFPSSA TSGYAPAACS PSYGPSQYYP BACU006389/1-298 GLPSPALQQN SGYPAQHPPS ALGVPFPSSA TSGYAPAACS PSYGPSQYYP ENSTTRP00000011607/1-298 GLPSPALQQN SGYPAQHPPS ALGVPFPSSG TSGYAPTACS PSYGPSQYYP 101 150 ENSP00000355140/1-301 LGQSEGDGGY FHPSSYGAQL GGL-SDGYGA GGAGPGPYPP QHPPYGNEQT ENSBTAP00000009997/1-302 LGQLEGDGGY FHPSSYGAQL GALSSDGYGT AGVGPGPYPP PQPHYGNEQT bmy_09809T0/1-298 LGQPEGDGGY FHPSSYGAQL GAL-SDGYGT AGTGPGPYPP PQPPYGNEQT BACU006389/1-298 LGQPEGDGGY FHPSSYGAQL GAL-SDGYGT AGTGPGPYPP PQPPYGNEQT ENSTTRP00000011607/1-298 LGQPEGDGGY FHPSSYGAQL GAL-SDGYGT AGTGPGPYPP PQPPYGNEQT 151 200 ENSP00000355140/1-301 ASFAPAYADL LSEDKETPCP SEPNTPTART FDWMKVKRNP PKTAKVSEPG ENSBTAP00000009997/1-302 GSFAPACADL LSEDKESACT SETSTPTAQT FDWMKVKRNP PKTAKVSELG bmy_09809T0/1-298 GNFAPAYAEL LSEAKESPCP SETSLPTART FDWMKVKRNP PKTAKVSELG BACU006389/1-298 GNFAPAYAEL LSEAKESPCP SETSLPTART FDWMKVKRNP PKTAKVSELG ENSTTRP00000011607/1-298 GNFAPAYAEL LSEDKESPCP SETSLPTART FDWMKVKRNP PKTAKVSELG 201 250 ENSP00000355140/1-301 LGSPSGLRTN FTTRQLTELE KEFHFNKYLS RARRVEIAAT LELNETQVKI ENSBTAP00000009997/1-302 LGAPGGLRTN FTTRQLTELE KEFHFNKYLS RARRVEIAAT LELNETQVKI bmy_09809T0/1-298 LGAPGGLRTN FTTRQLTELE KEFHFNKYLS RARRVEIAAT LELNETQVKI BACU006389/1-298 LGAPGGLRTN FTTRQLTELE KEFHFNKYLS RARRVEIAAT LELNETQVKI ENSTTRP00000011607/1-298 LGAPGGLRTN FTTRQLTELE KEFHFNKYLS RARRVEIAAT LELNETQVKI 251 300 ENSP00000355140/1-301 WFQNRRMKQK KREREEGRVP PAPPGCPKEA AGDASDQSTC TSPEASPSSV ENSBTAP00000009997/1-302 WFQNRRMKQK KREREGGRVP PAPPGCPKEA TGDTSDQSTC TSPEASPSSV bmy_09809T0/1-298 WFQNRRMKQK KREREGGRVP PAPSGCPKEA AGDASDQSTC TSPEASPSSV BACU006389/1-298 WFQNRRMKQK KREREGGRVP PAPSGCPKEA AGDASDQSTC TSPEASPSSV ENSTTRP00000011607/1-298 WFQNRRMKQK KREREGGRVP PAPSGCPKEA AGDASDQSTC TSPEASPSSV 301 350 ENSP00000355140/1-301 TS ENSBTAP00000009997/1-302 TS bmy_09809T0/1-298 TS BACU006389/1-298 TS ENSTTRP00000011607/1-298 TS