KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:58 2014 Check: 00 .. Name: ENSTTRP00000011541/1-403 Len: 551 Check: 913 Weight: 1.00 Name: ENSP00000297145/1-405 Len: 551 Check: 4280 Weight: 1.00 Name: ENSBTAP00000010002/1-405 Len: 551 Check: 4997 Weight: 1.00 Name: bmy_02135T0/1-348 Len: 551 Check: 9928 Weight: 1.00 Name: BACU016470/1-551 Len: 551 Check: 7925 Weight: 1.00 // 1 50 ENSTTRP00000011541/1-403 ---------- ---------- ---------- ---------- ---------- ENSP00000297145/1-405 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010002/1-405 ---------- ---------- ---------- ---------- ---------- bmy_02135T0/1-348 ---------- ---------- ---------- ---------- ---------- BACU016470/1-551 MPNLSKLRRA SAWLTARLRG LTTAPAHRIP GAAGRGEEQS GLALLPPQQL 51 100 ENSTTRP00000011541/1-403 ---------- ---------- ---------- ---------- ---------- ENSP00000297145/1-405 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010002/1-405 ---------- ---------- ---------- ---------- ---------- bmy_02135T0/1-348 ---------- ---------- ---------- ---------- ---------- BACU016470/1-551 QLASSASFSC SPSQTSGCVP GALRPLALGL FRFRPALQSP PISLCVWVSG 101 150 ENSTTRP00000011541/1-403 ---------- ---------- ---------- ---------- ------MEPG ENSP00000297145/1-405 ---------- ---------- ---------- ---------- ------MEPG ENSBTAP00000010002/1-405 ---------- ---------- ---------- ---------- ------MEPG bmy_02135T0/1-348 ---------- ---------- ---------- ---------- ------MEPG BACU016470/1-551 HLLGRRSRSS ASSRCCLRCC LLLPHLLRQA GGCGGLRGGG GGGGSDMEPG 151 200 ENSTTRP00000011541/1-403 AGGRSAARGH GARPPSIPPP REQERKLEQE KLSGVVKSVH RRLRKKYRE- ENSP00000297145/1-405 AGGRNTARAQ RAGSPNTPPP REQERKLEQE KLSGVVKSVH RRLRKKYREV ENSBTAP00000010002/1-405 PGGRSAARGH GAGPASTPPP REQERKLEQE KLSGVVKSVH RRLRKKYREV bmy_02135T0/1-348 AGGRSAARGH GARPPSIPPP REQERKLEQE KLSGVVKSVH RRLRKKYREV BACU016470/1-551 AGGRSAARGH GARPPSIPPP REQERKLEQE KLSGVVKSVH RRLRKKYREV 201 250 ENSTTRP00000011541/1-403 GDFDKIWREH CEDXXXXXXX XXXXXXXXXX XXXXXXEGEG R-EWCCSVCR ENSP00000297145/1-405 GDFDKIWREH CEDEETLCEY AVAMKNLADN HWAKTCEGEG RIEWCCSVCR ENSBTAP00000010002/1-405 GDFDKIWREH CEDEETLCEY AVAMKNLADN HWAKTCEGEG RIEWCCSVCR bmy_02135T0/1-348 GDFDKIWREH CEDEETLCEY AVAMKNLADN HWAKTCEGEG RIEWCCR--- BACU016470/1-551 GDFDKIWREH CEDEETLCEY AVAMKNLADN HWAKTCEGEG RIEWCCSICR 251 300 ENSTTRP00000011541/1-403 EYFQNGGKRK ALEKDEKRAV LATKTTPALN THESSKLEGH LTNLSFTNPE ENSP00000297145/1-405 EYFQNGGKRK ALEKDEKRAV LATKTTPALN MHESSQLEGH LTNLSFTNPE ENSBTAP00000010002/1-405 EYFQNGGKRK ALEKDEKRAI LGTKTTPALN THESSKLEGH LTNLSFTNPE bmy_02135T0/1-348 ---------- ---------- ---------- ---------- ---------- BACU016470/1-551 EYFQNGGKRK ALEKDEKRAV LATKTTPALN THESSKLEGH LTNLSFTNPE 301 350 ENSTTRP00000011541/1-403 FITELLQTSG KIRLLDVGSC FNPFLKFEEF LTVGIDIVPA VESVYKCDFL ENSP00000297145/1-405 FITELLQASG KIRLLDVGSC FNPFLKFEEF LTVGIDIVPA VESVYKCDFL ENSBTAP00000010002/1-405 FITELLQTSG KIRLLDVGSC FNPFLKFEEF LTVGIDIVPA VESVYKCDFL bmy_02135T0/1-348 ----LLQTSG KIRLLDVGSC FNPFLKFEEF LTVGIDIVPA VESVYKCDFL BACU016470/1-551 FITELLQTSG KIRLLDVGSC FNPFLKFEEF LTVGIDIVPA VESVYKCDFL 351 400 ENSTTRP00000011541/1-403 NLQLQQPLQL AQDAIDAFLK QLKNPIDSLP GELFHVVVFS LLLSYFPSPY ENSP00000297145/1-405 NLQLQQPLQL AQDAIDAFLK QLKNPIDSLP GELFHVVVFS LLLSYFPSPY ENSBTAP00000010002/1-405 NLQLQQPLQL AQDAIDAFLK QLKNPIDSLP GELFHVVVFS LLLSYFPSPY bmy_02135T0/1-348 NLQLQQPLQL AQDAIDAFLK QLKNPIDSLP GELFHVVVFS LLLSYFPSPY BACU016470/1-551 NLQLQQPLQL AQDAIDAFLK QLKNPIDSLP GELFHVVVFS LLLSYFPSPY 401 450 ENSTTRP00000011541/1-403 QRWICCKKAH ELLVLNGLLL IITPDSSHQN RHAMMMKSWK IAIESLGFKR ENSP00000297145/1-405 QRWICCKKAH ELLVLNGLLL IITPDSSHQN RHAMMMKSWK IAIESLGFKR ENSBTAP00000010002/1-405 QRWICCKKAH ELLVLNGLLL IITPDSSHQN RHAMMMKSWK IAIESLGFKR bmy_02135T0/1-348 QRWICCKKAH ELLVLNGLLL IITPDSSHQN RHAMMMKSWK IAIESLGFKR BACU016470/1-551 QRWICCKKAH ELLVLNGLLL IITPDSSHQN RHAMMMKSWK IAIESLGFKR 451 500 ENSTTRP00000011541/1-403 FKYSKFSHMH LMAFRKTSLK TTSDLVSRNY PGMLYIPQDF NSIEDEEYSN ENSP00000297145/1-405 FKYSKFSHMH LMAFRKISLK TTSDLVSRNY PGMLYIPQDF NSIEDEEYSN ENSBTAP00000010002/1-405 FKYSKFSHMH LMAFRKTSLK TTSDLVSRNY PGMLYIPQDF NSIEDEEYSN bmy_02135T0/1-348 FKYSKFSHMH LMAFRKTSLK TTSDLVSRNY PGMLYIPQDF NSIEDEEYSN BACU016470/1-551 FKYSKFSHMH LMAFRKTSLK TTSDLVSRNY PGMLYIPQDF NSIEDEEYSN 501 550 ENSTTRP00000011541/1-403 PSCYVRSDIE DEQLAYGFTE LPDAPYDSDS GESQSSSIPF YELEDPILLL ENSP00000297145/1-405 PSCYVRSDIE DEQLAYGFTE LPDAPYDSDS GESQASSIPF YELEDPILLL ENSBTAP00000010002/1-405 PSCYVRSDIE DEQLAYGFTE LPDAPYDSDS GESQASSIPF YELEDPILLL bmy_02135T0/1-348 PSCYVRSDIE DEQLAYGFTE LPDAPYDSDS GESQSSSIPF YELEDPILLL BACU016470/1-551 PSCYVRSDIE DEQLAYGFTE LPDAPYDSDS GESQSSSIPF YELEDPILLL 551 600 ENSTTRP00000011541/1-403 S ENSP00000297145/1-405 S ENSBTAP00000010002/1-405 S bmy_02135T0/1-348 S BACU016470/1-551 S