KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:59 2014 Check: 00 .. Name: ENSP00000228799/1-447 Len: 459 Check: 4385 Weight: 1.00 Name: ENSTTRP00000005070/1-444 Len: 459 Check: 1918 Weight: 1.00 Name: ENSBTAP00000010004/1-447 Len: 459 Check: 1911 Weight: 1.00 Name: bmy_06796T0/1-253 Len: 459 Check: 5774 Weight: 1.00 Name: BACU003117/1-444 Len: 459 Check: 1365 Weight: 1.00 // 1 50 ENSP00000228799/1-447 MRSVSYVQRV ALEFSGSLFP HAICLGDVDN DT-------- -LNELVVGDT ENSTTRP00000005070/1-444 MRSVSYVQRV ALEFSGSLFP HAICLGDVDN DT-------- -XXXXXXXXX ENSBTAP00000010004/1-447 MRSVSYVQRV ALEFSGSLFP HAICLGDVDN DT-------- -LNELVVGDT bmy_06796T0/1-253 MRSVSYVQRV ALEFSGSLFP HAICLGDVDN DTGLAYRVHC LLNELVVGDT BACU003117/1-444 MRSVSYVQRV ALEFSGSLFP HAICLGDVDN DT-------- -LNELVVGDT 51 100 ENSP00000228799/1-447 SGKVSVYKND DSRPWLTCSC QGMLTCVGVG DVCNKGKNLL VAVSAEGWFH ENSTTRP00000005070/1-444 XXXXXXXXXX XXXXXXXXXX XXXLTCVGVG DVCNKGKNLV VAVSAEGWFH ENSBTAP00000010004/1-447 SGKLSVYKND DSRPWLTCSC QGMLTCVGVG DVCNKGKNLV VAVSAEGWFH bmy_06796T0/1-253 SGKLSVYKND DSRPWLTCSC QGMLTCVGVG DVCNKGKNLV VAVSAEGWFH BACU003117/1-444 SGKLSVYKND DSRPWLTCSC QGMLTCVGVG DVCNKGKNLV VAVSAEGWFH 101 150 ENSP00000228799/1-447 LFDLTPAKVL DASGHHETLI GEEQRPVFKQ HIPANTKVML ISDI---DGD ENSTTRP00000005070/1-444 LCDLTPTKAP DASGHHETLG GEEQRPVFKQ HIPANTKVML ISDI---DGD ENSBTAP00000010004/1-447 LCDLTPAKSL DGSGHHETLG GEEQRPVFKQ HIPANTKVML ISDIGCADGD bmy_06796T0/1-253 LCDLTPTKAP DASGHHETLG GEEQRPVFKQ HIPANTK--- ---------- BACU003117/1-444 LCDLTPTKAP DASGHHETLG GEEQRPVFKQ HIPANTKVML ISDI---DGD 151 200 ENSP00000228799/1-447 GCRELVVGYT DRVVRAFRWE ELGEGPEHLT GQLVSLKKWM LEGQVDSLSV ENSTTRP00000005070/1-444 GCCELVVGYT DRVVRAFRWE DLGDGTEHLT GQLVSLKKWM LEGQVDSLSV ENSBTAP00000010004/1-447 GRCELVVGYT DRVVRAFRWE DLGEGAEHPM GQLVLLKKWM LEGQVDSLSV bmy_06796T0/1-253 ---------- ---------- ---------- ---------- ---------- BACU003117/1-444 GCCELVVGYT DRVVRAFRWE DLGDGTEHLT GQLVLLKKWM LEGQVDSLSV 201 250 ENSP00000228799/1-447 TLGPLGLPEL MVSQPGCAYA ILLCTWKKDT GSPPASEGPT DGSRETPAAR ENSTTRP00000005070/1-444 TPGRMGLPEL MVSQPGCAYA ILLCTWNTDP GPPPTSEGPE EGTRETPAAR ENSBTAP00000010004/1-447 TPGPLGVPEL MVSQPGCAYA ILLCTWNKDP GATPTSEGPM EGTREPLAAR bmy_06796T0/1-253 ---------- ---------- ---------- ---------- ---------- BACU003117/1-444 TPGPLGVPEL MVSQPGCAYA ILLCTWNTDP GPPPTSEGPE EGTRETPAAR 251 300 ENSP00000228799/1-447 DVVLHQTSGR IHNKNVSTHL IGNIKQGHGT ESSGSGLFAL CTLDGTLKLM ENSTTRP00000005070/1-444 DVVLHQTSGR IHNKNVSTHL IGNIKRGRSP KSGASGLFAL CTLDGTLKL- ENSBTAP00000010004/1-447 DVVLHQTSGR IHNKNVSTHL IGNIKRGHSP DSSASGLFAL CTLDGTLKL- bmy_06796T0/1-253 ---------- ---------- ---------- ---------- ---------- BACU003117/1-444 DVVLHQTSGR IHNKNVSTHL IGNIKRGRSP KSGASGLFAL CTLDGTLKL- 301 350 ENSP00000228799/1-447 EEMEEADKLL WSVQVDHQLF ALEKLDVTGN GHEEVVACAW DGQTYIIDHN ENSTTRP00000005070/1-444 --TEEADKLL WSVQEDHQLF ALEKLDVTGN GHEEVVACAW DGQTYIIDHN ENSBTAP00000010004/1-447 --MEEADRLL WSVQVDHQLF ALEKLDVTGN GHEEVVACAW DGQTYIIDHN bmy_06796T0/1-253 ---------- ---------- ---------- ---------- ---TYIIDHN BACU003117/1-444 --TEEADKLL WSVQVDHQLF ALEKLDVTGN GHEEVVACAW DGQTYIIDHN 351 400 ENSP00000228799/1-447 RTVVRFQVDE NIRAFCAGLY ACKEGRNSPC LVYVTFNQKI YVYWEVQLER ENSTTRP00000005070/1-444 RTVVRFQVDE NVRAFCAGLY ACKGGCNSPC LVYVTFNQKI YVYWEVQLER ENSBTAP00000010004/1-447 RTVVRFQVDE NIRAFCAGLY ACKDSRNSPC LVYVTFNQKI YVYWEVQLER bmy_06796T0/1-253 RTVVRFQVDE NVRAFCAGLY ACKGGCNSPC LVYVTFNQKI YVYWEVQLER BACU003117/1-444 RTVVRFQVDE NVRAFCAGLY ACKGGCNSPC LVYVTFNQKI YVYWEVQLER 401 450 ENSP00000228799/1-447 MESTNLVKLL ETKPEYHSLL QELGVDPDDL PVTRALLHQT LYHPDQPPQC ENSTTRP00000005070/1-444 MESTNLLKVL EAEPEFCGLL RELGVDPDDL PAARALLHQT LYHPDGPPQR ENSBTAP00000010004/1-447 MESTNLLKVL EAQPEFRELL GELGVDPDEL PAARALLHQT LYHPNQPPQC bmy_06796T0/1-253 MESTNLLKVL EAEPEFRGLL RELGVDPDDL PAARALLHQT LYHPDRPPQC BACU003117/1-444 MESTNLLKVL EAEPEFRGLL RELGVDPDDL PAARALLHQT LYRPDRPPQC 451 500 ENSP00000228799/1-447 APSSLQDPT ENSTTRP00000005070/1-444 APPGLRDAS ENSBTAP00000010004/1-447 SPAGPQDPT bmy_06796T0/1-253 ASTGLQDPS BACU003117/1-444 ASAGLQDPS