KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:39:59 2014  Check: 00 ..

 Name: BACU018144/1-179          Len:    241  Check:  3231  Weight:  1.00
 Name: ENSBTAP00000010015/1-240  Len:    241  Check:  2939  Weight:  1.00
 Name: bmy_05317T0/1-241         Len:    241  Check:  4261  Weight:  1.00
 Name: ENSTTRP00000009495/1-240  Len:    241  Check:  7369  Weight:  1.00

//


                          1                                                   50
BACU018144/1-179          MFPLLFGAGL VVLNLVSSAR SQKTEPLSGS GDQPLFRGAD RYDFAIMIPI 
ENSBTAP00000010015/1-240  MFPLLFVAGL VVLNLVSSAR SQKTEPLSGT GDQSLFRGAD QHDFAIVIPP 
bmy_05317T0/1-241         MFPLLFGAGL VVLNLVSSAR SQKTEPLSGS GDQPLFRGAD RYDFAIMIPP 
ENSTTRP00000009495/1-240  MFPLLFGAGL VVLNLVSSAR SQKTEPLSGS GDQPLFRGAD RYDFAIVIPP 


                          51                                                 100
BACU018144/1-179          GGTECFWQFA HQTGYFYFSY EVQRTLGMSH DRHVAATAHT PQGFLIDTSK 
ENSBTAP00000010015/1-240  GGTECFWQFA HQTGYFYFSY EVQRTIGMSH DRHVAATAHT PQGFLIETSK 
bmy_05317T0/1-241         GGTECFWQFA HQTGYFYFSY EVQRTLGMSH DRHVAATAHT PQGFLIDTSK 
ENSTTRP00000009495/1-240  GGTECFWQFA HQTGYFYFSY EVQRTLGMSH DRHVAATAHT PQGFLIDTTK 


                          101                                                150
BACU018144/1-179          NVRGQINFST QETD------ -------GEI -VRKRFSLQH QKPDF----- 
ENSBTAP00000010015/1-240  NVRGQINFST HETGFYQLCL ANQQNRFASV QVYLNFGVFY EGPEMDHKE- 
bmy_05317T0/1-241         NVRGQINFST QETGFYQLCL TNQQNRFGSV QVYLNFGVFY EGPEMDHKEK 
ENSTTRP00000009495/1-240  NVRGQINFST QETGFYQLCL KNQQNHFGSV QVYLNFGVFY DGPEMDHKE- 


                          151                                                200
BACU018144/1-179          ---------- --LETANGQG HSSAVH-WQF ---------- -----GSGLQ 
ENSBTAP00000010015/1-240  NERKQLNDTL DAIEESTRKV HYNIFHMWRH YNFARMRKTA DFFLLQSNYN 
bmy_05317T0/1-241         NERKQLNDTL DAIEKSTRKV QNNIFHMWRY YNFARMRKMA DFFLLQSNYN 
ENSTTRP00000009495/1-240  KKRKQLNDTX XXXXKSTRKL QNNIFHMWRY YNFARMRKMA DFFLLQSNYN 


                          201                                                250
BACU018144/1-179          VTNYYN---- -----SRVQK LDF---ILSS PTNQIIGK-- - 
ENSBTAP00000010015/1-240  YVNWWSTAQS LVIVLSGILQ LYFLKRLFNT PMTTETQKPR C 
bmy_05317T0/1-241         YVNWWSTAQS LVIILSGILQ LYFLKRLFNI PTTTDTKKSR C 
ENSTTRP00000009495/1-240  YVNWWSTAQS LVIILSGILQ LYFLKRLFNI PTTTDTKKPR C