KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:40:00 2014 Check: 00 .. Name: BACU018145/1-396 Len: 546 Check: 9764 Weight: 1.00 Name: ENSP00000474453/1-500 Len: 546 Check: 8337 Weight: 1.00 Name: ENSBTAP00000010016/1-544 Len: 546 Check: 8446 Weight: 1.00 Name: bmy_05316T0/1-539 Len: 546 Check: 4924 Weight: 1.00 Name: ENSTTRP00000009497/1-500 Len: 546 Check: 1165 Weight: 1.00 // 1 50 BACU018145/1-396 ---------- ---------- ---------- ---------- ---------- ENSP00000474453/1-500 ---------- ---------- ---------- ---------- --MAGGGGSS ENSBTAP00000010016/1-544 MAAGAGTAGS ASGPGVVRDP AASQSRKRPG REGGEGARRS DAMAGGGGSS bmy_05316T0/1-539 MAAGAGTAGS ASGPGVVRDP AASQSKKRPG R---EGAQRS DAMAGGGGSS ENSTTRP00000009497/1-500 ---------- ---------- ---------- ---------- --MAGGGGSS 51 100 BACU018145/1-396 -MSSFPAG-- ---------- ---------- ---------- ---------- ENSP00000474453/1-500 DGSGRAAGRR ASRSSGRARR GRHEPGLGGP AERGAGEARL EEAVNRWVLK ENSBTAP00000010016/1-544 DSSGRAAGRR ASRSGGRARR GRHAPGLGGA AERGAGEVRL EEAVNRWVLK bmy_05316T0/1-539 DSSGRAAGRR ASRSGGRARR GRHAPGLGGA AERGAGEARL EEAVNRWVLK ENSTTRP00000009497/1-500 DSSGRAAGRR ASRSGGRARR GRHAPRLGGS AERGAGEARL EEAVNRWVLK 101 150 BACU018145/1-396 ---------- ---------- --------LV RPLGKEHTVS RLLRVMQCLS ENSP00000474453/1-500 FYFHEALRAF RGSRYGDFRQ IRDIMQALLV RPLGKEHTVS RLLRVMQCLS ENSBTAP00000010016/1-544 FYFHEALRAF RGSRYGDFRQ IRDIMQALLV RPLGKEHTVS RLLRVMQCLS bmy_05316T0/1-539 FYFHEALRAF RSSRYGDFRQ IRDIMQALLV RPLGKEHTVS RLLRVMQCLS ENSTTRP00000009497/1-500 FYFHEALRAF RGSRYGDFRQ IRDIMQALLV RPLGKEHTVS RLLRVMQCLS 151 200 BACU018145/1-396 RIEEGENLDC SFDMEAELTP LESAINVLEM IKTEFTLTEA VVESSRKLVK ENSP00000474453/1-500 RIEEGENLDC SFDMEAELTP LESAINVLEM IKTEFTLTEA VVESSRKLVK ENSBTAP00000010016/1-544 RIEEGENLDC SFDMEAELTP LESAINVLEM IKTEFTLTEA VIESSRKLVK bmy_05316T0/1-539 RIEEGENLDC SFDMEAELTP LESAINVLEM IKTEFTLTEA VVESSRKLVK ENSTTRP00000009497/1-500 RIEEGENLDC SFDMEAELTP LESAINVLEM IKTEFTLTEA VVESSRKLVK 201 250 BACU018145/1-396 EAAVIICIKN KEFEKASKIL KKHMSKDPTT QKLRNDLLNI IREKNLAHPV ENSP00000474453/1-500 EAAVIICIKN KEFEKASKIL KKHMSKDPTT QKLRNDLLNI IREKNLAHPV ENSBTAP00000010016/1-544 EAAVIICIKN KEFEKASKIL KKHMSKDPTT QKLRNDLLNI IREKNLAHPV bmy_05316T0/1-539 EAAVIICIKN KEFEKASKIL KKHMSKDPTT QKLRNDLLNI IREKNLAHPV ENSTTRP00000009497/1-500 EAAVIICIKN KEFEKASKIL KKHMSKDPTT QKLRNDLLNI IREKNLAHPV 251 300 BACU018145/1-396 IQNFSYETFQ QKMLRFLESH LDDAEPYLLT MAKKALKSES STSTTVKEGK ENSP00000474453/1-500 IQNFSYETFQ QKMLRFLESH LDDAEPYLLT MAKKALKSES AASSTGKEDK ENSBTAP00000010016/1-544 IQNFSYETFQ QKMLRFLESH LDDAEPYLLT SLPKALKSES SASATVKEPQ bmy_05316T0/1-539 IQNFSYETFQ QKMLRFLESH LDDAEPYLLT MAKKALKSES STSTTVKEDK ENSTTRP00000009497/1-500 IQNFSYETFQ QKMLRFLESH LDDAEPYLLT MAKKALKCES STSPTVKEDK 301 350 BACU018145/1-396 -QPAPEPVEK PLREPA-RQL QNTPTTIGIM ALKAAFKTLS SAQDSEAAFS ENSP00000474453/1-500 -QPAPGPVEK PPREPA-RQL RNPPTTIGMM TLKAAFKTLS GAQDSEAAFA ENSBTAP00000010016/1-544 PQPAPEPVEK PLREPASRQL QSTPTTIGIR TLKAAFKTLS SAQDSEAAFS bmy_05316T0/1-539 -QPAPEPVEK PLREPA-RQL QNTPTTIGIM ALKAAFKTLS SAQDSEAAFS ENSTTRP00000009497/1-500 -QPAPEPVEK PLREPA-RQL QNTPTTIGIT ALKAAFKTLS SAQDSEAVFS 351 400 BACU018145/1-396 KLDQKDMVFP NKVCPPSPAL KNKRPRKDEN ESSAPAEDKS NT---PNQK- ENSP00000474453/1-500 KLDQKDLVLP TQALPASPAL KNKRPRKDEN ESSAPADGEG GSELQPKNKR ENSBTAP00000010016/1-544 KLDQKDMVFP NKVCPPSPAL KNKRTRKDDN ESSAPTEGEG GSELQPKTKR bmy_05316T0/1-539 KLDQKDMVFP NKVCPPSPAL KNKRPRKDEN ESSAHAEGEG GSELQPKNKR ENSTTRP00000009497/1-500 KLDQKDMVFP NKVCPPSPAL KNKRPRKDEN ESSAPAEGEG GSELQPKNKR 401 450 BACU018145/1-396 ---------- ---------- ---ASEQTPL RAFEQTLRER RRGGWLETAA ENSP00000474453/1-500 MTISRLVLEE DSQSTEPSAG LNSSQEAASA PPSKPTVLNQ PLPG--EKNP ENSBTAP00000010016/1-544 MTISRLVLEE DSQSTEPSSG LDSSQEVTPA SPSKPTVLNQ PLPG--EKNP bmy_05316T0/1-539 MTISRLVLEE DSQSTEPSAG LDSSQEVIPA SPSKPTILNQ PLPG--EKNP ENSTTRP00000009497/1-500 MTISRLVLEE DSQSTEPSAG LDSSQEVIPA SPSKPTILNQ PLPG--EKNP 451 500 BACU018145/1-396 RVPKGKWNNS NGVEEKETWV EEDELFQVQA APDEESTTNI TRKQKWTVEE ENSP00000474453/1-500 KVPKGKWNSS NGVEEKETWV EEDELFQVQA APDEDSTTNI TKKQKWTVEE ENSBTAP00000010016/1-544 KVTKGKWNSS NGVEEKETWV EEDELFQVQA APDEESATNT TKKQKWTVEE bmy_05316T0/1-539 KVPKGKWNNS NGVEEKETWV EEDELFQVQA APDEQSTTNI TRKQKWTVEE ENSTTRP00000009497/1-500 KVPKGKWNNS NGVEEKETWV EEDELFQVQA APDEESTTNI TRKQKWTVEE 501 550 BACU018145/1-396 SEWVKAGVQK YGEGNWAAIS KNYPFVNRTA VMIKDRWRTM KRLGMN ENSP00000474453/1-500 SEWVKAGVQK YGEGNWAAIS KNYPFVNRTA VMIKDRWRTM KRLGMN ENSBTAP00000010016/1-544 SEWVKAGVQK YGEGNWAAIS KNYPFVNRTA VMIKDRWRTM KRLGMN bmy_05316T0/1-539 SEWVKAGVQK YGEGNWAAIS KNYPFVNRTA VMIKDRWRTM KRLGMN ENSTTRP00000009497/1-500 SEWVKAGVQK YGEGNWAAIS KNYPFVNRTA VMIKDRWRTM KRLGMN