KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:40:00 2014 Check: 00 .. Name: ENSTTRP00000016145/1-599 Len: 616 Check: 8667 Weight: 1.00 Name: ENSP00000445001/1-606 Len: 616 Check: 7613 Weight: 1.00 Name: ENSBTAP00000010020/1-598 Len: 616 Check: 9758 Weight: 1.00 Name: bmy_10025T0/1-341 Len: 616 Check: 3655 Weight: 1.00 Name: BACU001177/1-609 Len: 616 Check: 9395 Weight: 1.00 // 1 50 ENSTTRP00000016145/1-599 MPEIRVTPL- -----XXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXX-- ENSP00000445001/1-606 MCGAGFGHFE WLAGGGAGQD VGRSCILVSI AGKNVMLDCG MHMGFNDD-- ENSBTAP00000010020/1-598 MPEIRVTPL- -----GAGQD VGRSCILVSI AGKNVMLDCG MHMGFSDD-- bmy_10025T0/1-341 ---------- ---------- ---------- ---------- ---------- BACU001177/1-609 MPEIRVTPL- -----GAGQD VGRSCILVSI AGKNVMLDCG MHMGFSDDVS 51 100 ENSTTRP00000016145/1-599 --------RR FPDFSYITRS GRLTDFLDCV IISHFHLDHC GALPYFSEMV ENSP00000445001/1-606 --------RR FPDFSYITQN GRLTDFLDCV IISHFHLDHC GALPYFSEMV ENSBTAP00000010020/1-598 --------RR FPDFSYITRS GRLTDFLDCV IISHFHLDHC GALPYFSEMV bmy_10025T0/1-341 ---------- ---------- ---------- ---------- ---------- BACU001177/1-609 PSGGRLPPSL LPGMTNVDPG LGVSGSDPQR GASHFHLDHC GALPYFSEMV 101 150 ENSTTRP00000016145/1-599 GYDGPIYMTQ PTQAICPILL EDYRKIAVDK KGEANFFTSQ MIKDCMKKVV ENSP00000445001/1-606 GYDGPIYMTH PTQAICPILL EDYRKIAVDK KGEANFFTSQ MIKDCMKKVV ENSBTAP00000010020/1-598 GYDGPIYMTQ PTQAICPILL EDYRKIAVD- KGEANFFTSQ MIKDCMKKVV bmy_10025T0/1-341 ---------- ---------- ---------- ---------- ---------- BACU001177/1-609 GYDGPIYMTQ PTQAICPILL EDYRKIAVDK KGEANFFTSQ MIKDCMKKVV 151 200 ENSTTRP00000016145/1-599 AVHLHQTVQV DDELEIKAYY AGHVLGAAMF QIKVGSESVV YTGDYNMTPD ENSP00000445001/1-606 AVHLHQTVQV DDELEIKAYY AGHVLGAAMF QIKVGSESVV YTGDYNMTPD ENSBTAP00000010020/1-598 AVHLHQTVQV DDELEIKAYY AGHVLGAAMF QIKVGSESVV YTGDYNMTPD bmy_10025T0/1-341 ---------- ---------- ---------- ---------- ---------- BACU001177/1-609 AVHLHQTVQV DDELEIKAYY AGHVLGAAMF QIKVGSESVV YTGDYNMTPD 201 250 ENSTTRP00000016145/1-599 RHLGAAWIDK CRPNLLITES TYATTIRDSK RCRERDFLKK VHETVERGGK ENSP00000445001/1-606 RHLGAAWIDK CRPNLLITES TYATTIRDSK RCRERDFLKK VHETVERGGK ENSBTAP00000010020/1-598 RHLGAAWIDK CRPSLLITES TYATTIRDSK RCRERDFLKK VHETVERGGK bmy_10025T0/1-341 ---------- ---------- ---------- ---------- ---------- BACU001177/1-609 RHLGAAWIDK CRPNLLITES TYATTIRDSK RCRERDFLKK VHETVERGGK 251 300 ENSTTRP00000016145/1-599 VLIPVFALGR AQELCILLET FWERMDLKAP IYFSTGLTEK ANHYYKLFIP ENSP00000445001/1-606 VLIPVFALGR AQELCILLET FWERMNLKVP IYFSTGLTEK ANHYYKLFIP ENSBTAP00000010020/1-598 VLIPVFALGR AQELCILLET FWERMDLKAP IYFSTGLTEK ANHYYKLFIP bmy_10025T0/1-341 ---------- ---------- ----MDLKAP IYFSTGLTEK ANHYYKLFIP BACU001177/1-609 VLIPVFALGR AQELCILLET FWERMDLKAP IYFSTGLTQK ANHYYKLFIP 301 350 ENSTTRP00000016145/1-599 WTNQKIRKTF VQRNMFEFKH VKAFDRAFAD SPGPMVVFAT PGMLHAGQSL ENSP00000445001/1-606 WTNQKIRKTF VQRNMFEFKH IKAFDRAFAD NPGPMVVFAT PGMLHAGQSL ENSBTAP00000010020/1-598 WTNQKIRKTF VQRNMFEFKH IKAFDRAFAD SPGPMVVFAT PGMLHAGQSL bmy_10025T0/1-341 WTNQKIRKTF VQRNMFEFKH IKAFDRAFAD SPGPMVVFAT PGMLHAGQSL BACU001177/1-609 WTNQKIRKTF VQRNMFEFKH IKAFDRAFAD SPGPMVVFAT PGMLHAGQSL 351 400 ENSTTRP00000016145/1-599 QIFRKWAGNE KNMVIMTGYC VQGTLGHKIL SGQRKLGMEG RPGXXXXXXX ENSP00000445001/1-606 QIFRKWAGNE KNMVIMPGYC VQGTVGHKIL SGQRKLEMEG RQVLEVKMQV ENSBTAP00000010020/1-598 QIFRKWAGNE KNMVIMPGYC VQGTVGHKIL SGQRKLEMEG RQVLEVKMQV bmy_10025T0/1-341 QIFRKWAGNE KNMVIMPGYC VQGTVGHKIL SGQRKLEMEG RQVLEVKMQV BACU001177/1-609 QIFRKWAGNE KNMVIMPGYC VQGTVGHKIL SGQRKLEMEG RQVLEVKMQV 401 450 ENSTTRP00000016145/1-599 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XKIEQEFRVS ENSP00000445001/1-606 EYMSFSAHAD AKGIMQLVGQ AEPESVLLVH GEAKKMEFLK QKIEQELRVN ENSBTAP00000010020/1-598 EYMSFSAHAD AKGIMQLVGQ AEPENVLLVH GEAKKMEFLK QKIEQEFRVN bmy_10025T0/1-341 EYMSFSAHAD AKGIMQLVGQ AEPENVLLVH GEAKKMEFLK QKIEQEFRVS BACU001177/1-609 EYMSFSAHAD AKGIMQLVGQ AEPENVLLVH GEAKKMEFLK QKIEQEFRVS 451 500 ENSTTRP00000016145/1-599 CYMPANGETV TLPTSPSIPV GISLGLLKRE LAQGLLPDSK KPRLLHGTLI ENSP00000445001/1-606 CYMPANGETV TLPTSPSIPV GISLGLLKRE MAQGLLPEAK KPRLLHGTLI ENSBTAP00000010020/1-598 CYMPANGETV TLPTSPSIPV GISLGLLKRE MAQGLLPDAK KPRLLHGTLI bmy_10025T0/1-341 CYMPANGETV TLPTSPSIPV GVSLGLLKRE MAQGLLPDAK KPRLLHGTLI BACU001177/1-609 CYMPANGETV TLPTSPSIPV GVSLGLLKRE MAQGLLPDAK KPRLLHGTLI 501 550 ENSTTRP00000016145/1-599 MKDSNFRLVS SEQALKELGL AEHQLRFTCR VHLHDTRKEQ ETAVRVYSHL ENSP00000445001/1-606 MKDSNFRLVS SEQALKELGL AEHQLRFTCR VHLHDTRKEQ ETALRVYSHL ENSBTAP00000010020/1-598 MKDSNFRLVS SEQALKELGL AEHQLRFTCR VHLHDTRKEQ EMAMRVYSHL bmy_10025T0/1-341 MKDSNFRLVS SEQALKELGL AEHQLRFTCR VHLHDTRKEQ ETAVRVYSHL BACU001177/1-609 MKDSNFRLVS SEQALKELGL AEHQLRFTCR VHLHDTRKEQ ETAVRVYSHL 551 600 ENSTTRP00000016145/1-599 KSVLKDHCVQ HLPDGSVTVE SILIQAAAHS EDPGTKVLLV SWTYQDEELG ENSP00000445001/1-606 KSVLKDHCVQ HLPDGSVTVE SVLLQAAAPS EDPGTKVLLV SWTYQDEELG ENSBTAP00000010020/1-598 KSVLKDHCVQ HLPDGSVTVE SILVQAAAHS EDPGTKVLLV SWTYQDEELG bmy_10025T0/1-341 KSVLKDHCVQ HLPDGSVTVE SILIQAAAHS EDPGTKVLLV SWTYQDEELG BACU001177/1-609 KSVLKDHCVQ HLPDGSVTVE SILIQAAAHS EDPGTKVLLV SWTYQDEELG 601 650 ENSTTRP00000016145/1-599 SYLTSLLKKG LPQAS- ENSP00000445001/1-606 SFLTSLLKKG LPQAPS ENSBTAP00000010020/1-598 SYLTSLLKKG LPQAS- bmy_10025T0/1-341 SYLTSLLKKG LPQAS- BACU001177/1-609 SYLTSLLKKG LPQAS-