KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:40:00 2014 Check: 00 .. Name: ENSP00000236671/1-412 Len: 472 Check: 399 Weight: 1.00 Name: ENSBTAP00000010022/1-412 Len: 472 Check: 55 Weight: 1.00 Name: BACU003604/1-398 Len: 472 Check: 3332 Weight: 1.00 Name: bmy_05016T0/1-451 Len: 472 Check: 5535 Weight: 1.00 Name: ENSTTRP00000014090/1-387 Len: 472 Check: 5083 Weight: 1.00 // 1 50 ENSP00000236671/1-412 ---------- ---------- ---------- -MQPSSLLPL ---------- ENSBTAP00000010022/1-412 ---------- ---------- ---------- -MQTPRLLPL ---------- BACU003604/1-398 MEPLRWLEPD TTGCRVKLLA PPTIHAASCP DPPGASEMPL RKKQVGHSER bmy_05016T0/1-451 ---------- ---------V TSRVQTSRSA DPARLRRHPG YKRATSRAVR ENSTTRP00000014090/1-387 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000236671/1-412 ---------- ---------A LCLLAAPASA LVRIPLHKFT SIRRTMSEVG ENSBTAP00000010022/1-412 ---------- -------LLA LGLLAAPAAA VIRIPLHKFT SIRRTMSEAM BACU003604/1-398 VSS------- ---------- ----QTSASE YHRIPLHKFT SIRRTMSEMG bmy_05016T0/1-451 CDRVAAAMQT PCLLLLLLLA LGLLAAPAAA LVRIPLHKFT SIRRTMSEMG ENSTTRP00000014090/1-387 ---------- ---------- ---------- ---IPLHKFT SIRRTMSEMG 101 150 ENSP00000236671/1-412 GSVEDLIAKG PVSKYSQAVP AVTEGPIPEV LKNYMDAQYY GEIGIGTPPQ ENSBTAP00000010022/1-412 GPVEHLIAKG PISKYATGEP AVRQGPIPEL LKNYMDAQYY GEIGIGTPPQ BACU003604/1-398 GPMEDLIAKG PISKYSQGVP TATQGPIPEI LKNYMDAQYY GEIGIGTPPQ bmy_05016T0/1-451 GPMEDLIAKG PISKYSQGVP TATQGPIPEI LKNYMDAQYY GEIGIGTPPQ ENSTTRP00000014090/1-387 GPMEDLIAKG PISKYSQGVP TVTQGPIPEI LKNYMDAQYY GEIGIGTPPQ 151 200 ENSP00000236671/1-412 CFTVVFDTGS SNLWVPSIHC KLLDIACWIH HKYNSDKSST YVKNGTSFDI ENSBTAP00000010022/1-412 CFTVVFDTGS ANLWVPSIHC KLLDIACWTH RKYNSDKSST YVKNGTTFDI BACU003604/1-398 CFTVVFDTGS SNLWVPSIHC KLLDIACWTH HKYNSGKSST YVKNGTSFDI bmy_05016T0/1-451 CFTVVFDTGS SNLWVPSIHC KLLDIACWTH HKYNSGKSST YVKNGTSFDI ENSTTRP00000014090/1-387 CFTVVFDTGS SNLWVPSIHC KLLDIACWTH HKYNSGKSST YVKNGTSFDI 201 250 ENSP00000236671/1-412 HYGSGSLSGY LSQDTVSVPC QSASSASALG GVKVERQVFG EATKQPGITF ENSBTAP00000010022/1-412 HYGSGSLSGY LSQDTVSVPC N--PSSSSPG GVTVQRQTFG EAIKQPGVVF BACU003604/1-398 HYGSGSLSGY LSQDTVSVPC K--SGLSSVG SIKVERQTFG EATKQPGITF bmy_05016T0/1-451 HYGSGSLSGY LSQDTVSVPC K--SGLLSLG SIKVERQTFG EATKQPGITF ENSTTRP00000014090/1-387 HYGSGSLSGY LSQDTVSVPC K--SGLSSLG SIKVERQTFG EATKQPGITF 251 300 ENSP00000236671/1-412 IAAKFDGILG MAYPRISVNN VLPVFDNLMQ QKLVDQNIFS FYLSRDPDAQ ENSBTAP00000010022/1-412 IAAKFDGILG MAYPRISVNN VLPVFDNLMQ QKLVDKNVFS FFLNRDPKAQ BACU003604/1-398 IAAKFDGILG MAYPRISVNN VVPVFDNLMQ QKLVDKNIFS FYLNRDPNAQ bmy_05016T0/1-451 IAAKFDGILG MAYPRISVNN VVPVFDNLMQ QKLVDKNIFS FYLNRDPNAQ ENSTTRP00000014090/1-387 IAAKFDGILG MAYPRISVNG VVPVFDNLMQ QKLVDKNVFS FYLNRDPNAQ 301 350 ENSP00000236671/1-412 PGGELMLGGT DSKYYKGSLS YLNVTRKAYW QVHLDQVEVA SGLTLCKEGC ENSBTAP00000010022/1-412 PGGELMLGGT DSKYYRGSLM FHNVTRQAYW QIHMDQLDVG SSLTVCKGGC BACU003604/1-398 PGGELMLGGT DPKYYKGSLI YHNVTRMAYW QIHMDQ-SVG DQLGTVGHGA bmy_05016T0/1-451 PGGELMLGGT DPKYYKGSLI YHNVTRMAYW QVHMDQVDVG SSLTVCKGGC ENSTTRP00000014090/1-387 PGGELMLGGT DPKYYKGSLI YHNVTRMAYW QVHMDQVDVG SSLTLCKGGC 351 400 ENSP00000236671/1-412 EAIVDTGTSL MVGPVDEVRE LQKAIGAVPL IQGEYMIPCE KVSTLPAITL ENSBTAP00000010022/1-412 EAIVDTGTSL IVGPVEEVRE LQKAIGAVPL IQGEYMIPCE KVSSLPQVTV BACU003604/1-398 ED--AQGCSL ---------- ---------- -GGDLRWPSQ ---------- bmy_05016T0/1-451 EAIVDTGTSL IVGPVEEVRE LQKAIGALPL IQGEYMIPCE KVSSLPKVIV ENSTTRP00000014090/1-387 EAIVDTGTSL IVGPVEEVRE LQKAIGAVPL IQGEYMIPCE KVSSLPKVTV 401 450 ENSP00000236671/1-412 KLGGKGYKLS PEDYTLKVSQ AGKTLCLSGF MGMDIPPPSG PLWILGDVFI ENSBTAP00000010022/1-412 KLGGKDYALS PEDYALKVSQ AGTTVCLSGF MGMDIPPPGG PLWILGDVFI BACU003604/1-398 ---------- -------VSQ AGKTMCLSGF MGMDIPPPGG PLWILGDVFI bmy_05016T0/1-451 KLGGKGYKLS PEDYTLKVSQ AGKTMCLSGF MGMDIPPPGG PLWILGDVFI ENSTTRP00000014090/1-387 KLGAKDYTLS PEDYTLKVSQ AGRTMCLSGF MGMDIPPPGG PLWILGDVFI 451 500 ENSP00000236671/1-412 GRYYTVFDRD NNRVGFAEAA RL ENSBTAP00000010022/1-412 GRYYTVFDRD QNRVGLAEAA RL BACU003604/1-398 GRYYAVFDRD QNRVGLAEAA RP bmy_05016T0/1-451 GRYYAVFDRD QNRVGLAEAA RP ENSTTRP00000014090/1-387 GRYYAVFDRD QNRVGLAEAA RP