KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:40:01 2014 Check: 00 .. Name: ENSTTRP00000010354/1-937 Len: 1035 Check: 1749 Weight: 1.00 Name: ENSP00000381549/1-1034 Len: 1035 Check: 402 Weight: 1.00 Name: ENSBTAP00000010028/1-987 Len: 1035 Check: 5730 Weight: 1.00 Name: bmy_01239T0/1-723 Len: 1035 Check: 9731 Weight: 1.00 Name: BACU015114/1-986 Len: 1035 Check: 1261 Weight: 1.00 // 1 50 ENSTTRP00000010354/1-937 ---------- ---------- ---------- ---------- ---------- ENSP00000381549/1-1034 MASVFMCGVE DLLFSGSRFV WNLTVSTLRR WYTERLRACH QVLRTWCGLQ ENSBTAP00000010028/1-987 ---------- ---------- ---------- ---------- --------LS bmy_01239T0/1-723 ---------- ---------- ---------- ---------- ---------- BACU015114/1-986 ---------- ---------- ---------- MVNQVEGYAC QPQPDATLAV 51 100 ENSTTRP00000010354/1-937 ----MTEGRH CQVHLLDDRR LELLVQPKLL SRELLDLVAS HFSLKEKEYF ENSP00000381549/1-1034 DVYQMTEGRH CQVHLLDDRR LELLVQPKLL ARELLDLVAS HFNLKEKEYF ENSBTAP00000010028/1-987 HGLSMTEGRH CQVCLLDDRR LELLVQPKLL SRELLDLVAS HFNLKEKEYF bmy_01239T0/1-723 ---------- ---------- ---------- ---------- ---------- BACU015114/1-986 LSPQMTEGRH CQVHLLDDRR LELLVQPKLL SRELLDLVAS HFNLKEKEYF 101 150 ENSTTRP00000010354/1-937 GITFTDDTGQ QNWLQLDHRV LDHDLPKKPG PTVLYFSVRF YIESISFLKD ENSP00000381549/1-1034 GITFIDDTGQ QNWLQLDHRV LDHDLPKKPG PTILHFAVRF YIESISFLKD ENSBTAP00000010028/1-987 GITFTDDTGQ QNWLQLDHRV LDHDLPKKPG PTLLYFSVRF YIESISFLKD bmy_01239T0/1-723 ---------- ---------- ---------- ---------- ---------- BACU015114/1-986 GITFTDDTGQ QNWLQLDHRV LDHDLPKKPG PTVLHFSVRF YIESISFLKD 151 200 ENSTTRP00000010354/1-937 KTTVELFFLN AKACVHKGQI EVDSETIFRL AALILQWLR- ---HDENARK ENSP00000381549/1-1034 KTTVELFFLN AKACVHKGQI EVESETIFKL AAFILQEAKG DYTSDENARK ENSBTAP00000010028/1-987 KTTVELFFLN AKSCVHKGQI EVDSETIFRL AALILQEAKG DYTSDENARK bmy_01239T0/1-723 ---------- ---------- ---------- ---------- ---------- BACU015114/1-986 KTTVELFFLN AKACVHKGQI EVDSETIFRL AALILQEAKG DYTSDENARK 201 250 ENSTTRP00000010354/1-937 DLKTLPAFPT KTLQEHPSLA YCEDRVIEHY LKIKGLTRGQ AVVQYMKIVE ENSP00000381549/1-1034 DLKTLPAFPT KTLQEHPSLA YCEDRVIEHY LKIKGLTRGQ AVVQYMKIVE ENSBTAP00000010028/1-987 DLKTLPAFPT KTLQEHPSLA YCEDRVIEHY LKIKGLTRGQ AVVQYMKIVE bmy_01239T0/1-723 -------MPT AS-------- ---------- ---------- ---------- BACU015114/1-986 DLKTLPAFPT KTLQEHPSLA YCEDRVIEHY LKIKGLTRGQ AVVQYMKIVE 251 300 ENSTTRP00000010354/1-937 ALPTYGVHYY AVKDKQGLPW WLGISYKGIG QYDLQDKVKP RKXXXXXXXX ENSP00000381549/1-1034 ALPTYGVHYY AVKDKQGLPW WLGISYKGIG QYDIQDKVKP RKLFQWKQLE ENSBTAP00000010028/1-987 ALPTYGVHYY AVKDKQGLPW WLGISYKGIG QYDLQDKVKP RKLFQWKQLE bmy_01239T0/1-723 ---------- ---------- ---------- ---------- ---------- BACU015114/1-986 ALPTYGVHYY AVKDKQGLPW WLGISYKGIG QYDLQDKVKP RKLFQWKQLE 301 350 ENSTTRP00000010354/1-937 XXXXXXXXXX XXXXXXXXIS VSRRTFGQSG LFVQTWYANS SLIKSIWVMA ENSP00000381549/1-1034 NLYFREKKFA VEVHDPRRIS VSRRTFGQSG LFVQTWYANS SLIKSIWVMA ENSBTAP00000010028/1-987 NLYFREKKFA VEVHDPRRIS VSRRTFGQSG LFVQTWYANS SLIKSIWVMA bmy_01239T0/1-723 ---------- -------KIS VSRRTFGQSG LFVQTWYANS SLIKSIWVMA BACU015114/1-986 NLYFREKKFA VEVHDPRRIS VSRRTFGQSG LFVQTWYANS SLIKSIWVMA 351 400 ENSTTRP00000010354/1-937 ISQHQFYLDR KQSKAKIPSA RSLDDIAMDL TETGTPRVSK MVTLEAKSQF ENSP00000381549/1-1034 ISQHQFYLDR KQSKAKIPSA RSLDEIAMDL TETGTQRASK LVTLETKSQF ENSBTAP00000010028/1-987 ISQHQFYLDR KQSKAKIPSA RSLDDIAMDL TETGAPRVSK PVTLEAKSQF bmy_01239T0/1-723 ISQHQFYLDR KQSKAKIPSA RSLDDIAMDL TETGTPRVSK MVTLEAKSQF BACU015114/1-986 ISQHQFYLDR KQSKAKIPSA RSLDDIAMDL TETGTPRVSK MVTLEAKSQF 401 450 ENSTTRP00000010354/1-937 IMASNGSLIS SGSQDSEVSE EQKREKILEL KKKEKLLQEK LLKKVEELKK ENSP00000381549/1-1034 IMASNGSLIS SGSQDSEVSE EQKREKILEL KKKEKLLQEK LLKKVEELKK ENSBTAP00000010028/1-987 IMASNGSLIS SGSQDSEVSE EQKREKILEL KKKEKLLQEK LLKKVEELKK bmy_01239T0/1-723 IMASNGSLIS SGSQDSEVSE EQKREKILEL KKKEKLLQEK LLKKVEELKK BACU015114/1-986 IMASNGSLIS SGSQDSEVSE EQKREKILEL KKKEKLLQEK LLKKVEELKK 451 500 ENSTTRP00000010354/1-937 ICLREAELTG KMPKEYPLNI GEKPPHVRRR VGTAFKLDDN LLPSEEDPAL ENSP00000381549/1-1034 ICLREAELTG KMPKEYPLNI GEKPPQVRRR VGTAFKLDDN LLPSEEDPAL ENSBTAP00000010028/1-987 ICLREAELTG KMPKEYPLNV GEKPPQVRRR IGTAFKLDDN LLPSEEDPAL bmy_01239T0/1-723 ICLREAELTG KMPKEYPLNV GEKAPHVRRR VGTTFKLDDN LLPSEEDPAL BACU015114/1-986 ICLREAELTG KMPKEYPLNV GEKAPHVRRR VGTAFKLDDN LLPSEEDPAL 501 550 ENSTTRP00000010354/1-937 QELESNFLIQ QKLVEAAKKL ASEPDLCKTV KKKRKQDYTD AVKKLQEIEN ENSP00000381549/1-1034 QELESNFLIQ QKLVEAAKKL ANEPDLCKTV KKKRKQDYTD AMKKLQEIEN ENSBTAP00000010028/1-987 QELESNFLIQ QKLVEAAKKL ANEPDLCKTV KKKRKQDYTD AVKKLQEIEN bmy_01239T0/1-723 QELESNFLIQ QKLVEAAKKL ANEPDLCKTV KKKRKQDYTD AVKKLQEIEN BACU015114/1-986 QELESNFLIQ QKLVEAAKKL ANEPDLCKTV KKKRKQDYTD AVKKLQEIEN 551 600 ENSTTRP00000010354/1-937 AINEYRIRCG KKPSQKASVI LPEDIIPSEG SSLSDTTTYD DXXXXXXXXX ENSP00000381549/1-1034 AINEYRIRCG KKPSQKATV- LPEDIIPSES SSLSDTTTYD DPSDAFTFPG ENSBTAP00000010028/1-987 AINEYRIRCG KKPSQKATVI LPEDIIPSES SSLSDTTTYD DPNDTFTLAG bmy_01239T0/1-723 AINEYRIRCG KKPSQKATVI VPEDIIPSES SSLSDTTTYD DPNDTCTLAG BACU015114/1-986 AINEYRIRCG KKPSQKATVI VP-------- ---------- -ASDTCTLAG 601 650 ENSTTRP00000010354/1-937 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XEMLSTHSSP ENSP00000381549/1-1034 QRSSSVPHSP RILPPKSLGI ERIHFRKSSI NEQFVDTRQS REMLSTHSSP ENSBTAP00000010028/1-987 QRSSSVPHSP RILPPKSLGI ERIHFRKSSI NEQFVDTRQS REMLSTHSSP bmy_01239T0/1-723 QQSSSVPHSP RILPPKSLGI ERIHFRKSSI NEQFVDTRQC REMLSTHSSP BACU015114/1-986 QQSSSVPHSP RILPPKSLGI ERIHFRKSSI NEQFVDTRQC REMLSTHSSP 651 700 ENSTTRP00000010354/1-937 YRTLERRPQG GRSVPTTPVL TRNAYSSSHL QPESSSQHCR QRSGSLESQS ENSP00000381549/1-1034 YKTLERRPQG GRSMPTTPVL TRNAYSSSHL EPESSSQHCR QRSGSLESQS ENSBTAP00000010028/1-987 YKTLERRPQG GRSMPTTPVL TRNAYSSSHL EPEPSSQHCR QRSGSLESQS bmy_01239T0/1-723 YKTLERRPQG GRSVPTTPVL TRNAYSSSHL QPESSSQHCR QRSGSLESQS BACU015114/1-986 YKTLERRPQG GRSVPTTPVL TRNAYSSSHL QPESSSQHCR QRSGSLESQS 701 750 ENSTTRP00000010354/1-937 HLLSEMDHDK PFLSLSKSQR SSSTEILDDG SSYTSQSSTE YYCVTPVAGS ENSP00000381549/1-1034 HLLSEMDSDK PFFSLSKSQR SSSTEILDDG SSYTSQSSTE YYCVTPVTGP ENSBTAP00000010028/1-987 HLLSEMDHEK PFFSLSKSQR SSSTEVLDDG SSYTSQSSTE YYCTTPVAGP bmy_01239T0/1-723 HLLSEMDHDK PFPSLSKSQR SSSTEILDDG SSYTSQSSTE YYCVTPVAGP BACU015114/1-986 HLLSEMDHDK PFPSLSKSQR SSSTEILDDG SSYTSQSSTE YYCVTPVAGP 751 800 ENSTTRP00000010354/1-937 CYTTQTLDTR SRGRRRSKKQ NVSTSNSGSM PNLAQKDSLK NGVYSKSQEQ ENSP00000381549/1-1034 YYTTQTLDTR TRGRRRSKKQ NVSTSNSGSM PNLAQKDSLR NGVYSKSQEP ENSBTAP00000010028/1-987 YYTTQTLDTR SRGRRRSKKQ NASTSNSGSM PNLAHKDSLR NGVYPKSQEQ bmy_01239T0/1-723 CYTTQTLDTR SRGRRRSKKQ NVSTSNSGSM PNLAQKDSGR NGVYSKSQEQ BACU015114/1-986 CYTTQTLDTR SRGRRRSKKQ NVSTSNSGSM PNLAQKDSVR NGVYSKSQEQ 801 850 ENSTTRP00000010354/1-937 PSSSYYTAGY TPYAECDLYY SGGYVYENDT EGQYSVNPSY RSSAHYGYDH ENSP00000381549/1-1034 PSSSYYIAGY TPYAECDFYY SGGYVYENDT EGQYSVNPSY RSSAHYGYER ENSBTAP00000010028/1-987 PSSSCHIAGY TPYAECDLYY AGGYVYENDT EGQYSVNPSY RSSAHYGYDR bmy_01239T0/1-723 PASSYYTAGY TPYAECDLYY SGGYVYENDT EGQYSVNPSY RSSAHYGYDH BACU015114/1-986 PSSNYYTAGY TPHAECDLYY SGGYVYENDT EGQYSVNPSY RSSAHYGYDH 851 900 ENSTTRP00000010354/1-937 PRDYSRSFHE DEVDQVPHNP YATLRLPRKA AAKSEHITKN IHKALVAEHL ENSP00000381549/1-1034 QRDYSRSFHE DEVDRVPHNP YATLRLPRKA AAKSEHITKN IHKALVAEHL ENSBTAP00000010028/1-987 PRDCSRSFHE DEVDRVPHNP YATLRLPRKA AAKSEHITKN IHKALVAEHL bmy_01239T0/1-723 PRDYSRSCHE DEVDRVPHNP YATLRLSRKA AAKSEHITKN IHKALVAEHL BACU015114/1-986 PRDYSRSCHE DEVERVPHNP YATLRLSRKA AAKSEHITKN IHKALVAEHL 901 950 ENSTTRP00000010354/1-937 RGWYQRASGQ KEQGHSTQTS FDSDRGSQRS LGFAGLQVPC SPSSRASSYS ENSP00000381549/1-1034 RGWYQRASGQ KDQGHSPQTS FDSDRGSQRC LGFAGLQVPC SPSSRASSYS ENSBTAP00000010028/1-987 RGWYQRASGQ KEQAHSAQTS FDSDRGSQRS LGFAGLQVPC SPSSRASSYS bmy_01239T0/1-723 RGWYQRASGQ KEQGHSTQTS FDSDRGSQRS LGFAGLQVPC SPSSRASSYS BACU015114/1-986 RGWYQRASGQ KEQGHSTQTS FDSDRGSQRS LGFAGLQVPC SPSSRASSYS 951 1000 ENSTTRP00000010354/1-937 SVSSTNASGN WRTQLTIGLS EYETPAHSSY TSCYGNVYNP LPSPG----- ENSP00000381549/1-1034 SVSSTNASGN WRTQLTIGLS DYETPAHSSY TSCYGNVYNP LPSPSRQYTE ENSBTAP00000010028/1-987 SVSSTNASGN WRTQITLGLS EYEIPAHSSY TSCYSNIYNP LPSPGRPYTE bmy_01239T0/1-723 SVSSTSASGN WRTQITIGLS EYEIPAHSSY TSCYGNIYNP LPSPGRPYTE BACU015114/1-986 SVSSTNASGN WRTQITIGLS EYETPAHSSY TSCYGNIYNP LPSPGRPYTE 1001 1050 ENSTTRP00000010354/1-937 ---------- ---------- ---------- ----- ENSP00000381549/1-1034 ISQLDGTDGN QLEDNLESSE QRLFWHEDSK PGTLV ENSBTAP00000010028/1-987 TGQLDGTDGS RLEDSLGSSE QRLFWHEDSK PGTLV bmy_01239T0/1-723 TGQLDNTDGN RLEDSLENSE QRLFWHEDSK PGTLV BACU015114/1-986 TGQLDNTDGN RLEDSLENSE QRLFWHEDSK PGTLV