KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:40:02 2014 Check: 00 .. Name: ENSP00000363318/1-369 Len: 414 Check: 664 Weight: 1.00 Name: ENSBTAP00000010033/1-379 Len: 414 Check: 670 Weight: 1.00 Name: ENSTTRP00000005054/1-364 Len: 414 Check: 6255 Weight: 1.00 Name: bmy_08439T0/1-408 Len: 414 Check: 8163 Weight: 1.00 Name: BACU010341/1-384 Len: 414 Check: 4706 Weight: 1.00 // 1 50 ENSP00000363318/1-369 ---------- ---------- -------MLK PSLPFTSLLF LQLPLLGVGL ENSBTAP00000010033/1-379 ---------- ---------- -------MLK PPLPLRSLLF LQLPLLGVGL ENSTTRP00000005054/1-364 ---------- ---------- -------MLK PPLPLRSLLF LQLPLLGVGL bmy_08439T0/1-408 MCGWGGVVGK GPRLLTQSTP RERRVSAMLK PPLPLRSLLF LQLPLLGVGL BACU010341/1-384 ---------- ---------- -------MLK PPLPLRSLLF LQLLLRGVGL 51 100 ENSP00000363318/1-369 NTTILTPNGN EDTTA----- ---DFFLTTM PTDSLSVSTL PLPEVQCFVF ENSBTAP00000010033/1-379 NPKFLTPSGN EDI--GGKPG TGGDFFLTST PAGTLDVSTL PLPKVQCFVF ENSTTRP00000005054/1-364 NPKVLTPNGN EDITA----- ---DFFLTST PAGTLSVSTL PLPKVQCFVF bmy_08439T0/1-408 NPKALTPNGN EDITAGGKPG TGGDFFLTST PPGTLNVSTL PLPKVQCFVF BACU010341/1-384 NPNVLTPNGN EDITAGGKPG TGGDFFLTST PPGTLNVSTL PLPKVQCFVF 101 150 ENSP00000363318/1-369 NVEYMNCTWN SSSEPQPTNL TLHYWYKN-S DNDKVQKCSH YLFSEEITSG ENSBTAP00000010033/1-379 NVEYMNCTWN SSSEPQPNNL TLHYGYRNFN GDDKLQECGH YLFSEGITSG ENSTTRP00000005054/1-364 NVEYMNCTWN SSSEPQRTNL TLHYGYKNFN DDDKLQECGH YLFSEGITSG bmy_08439T0/1-408 NVEYMNCTWN SSSEPQPTNL TLHYGYKNFN DDDKLQECGH YLFSEGITSG BACU010341/1-384 NVEYMNCTWN SSFEPQPTNL TLHYGYKNFN DDDKLQECGH YLFSEGITSG 151 200 ENSP00000363318/1-369 CQLQKKEIHL YQTFVVQLQD PREPRRQATQ MLKLQNLVIP WAPENLTLHK ENSBTAP00000010033/1-379 CWFGKKEIRL YETFVVQLQD PREHRKQPKQ MLKLQDLVIP WAPENLTLRN ENSTTRP00000005054/1-364 CWFGKKEIHL YQTFVVQLQD PWEHRRQPEQ LLKLQDLVIP WAPENLTLRN bmy_08439T0/1-408 CWFGKKEIHL YQTFVVQLQD PWEHRRQPEQ LLKLQDLVIP WAPENLTLRN BACU010341/1-384 CWFGKKEIHL YQTFVVQLQD PWEHRRQPEQ LLKLQDLVIP WAPENLTLRN 201 250 ENSP00000363318/1-369 LSESQLELNW NNRFLNHCLE HLVQYRTDWD HSWTEQSVDY RHKFSLPSVD ENSBTAP00000010033/1-379 LSEFQLELSW SNRYLDHCLE HLVQYRSDRD RSWTEQSVDH RHSFSLPSVD ENSTTRP00000005054/1-364 LSEFQLELSW SNRHLDHCLE HLVQYRSDRD HSWTEQAVDH RHSFSLPSVD bmy_08439T0/1-408 LSEFQLELSW SNRHLDHCLE HLVQYRSDRD HSWTEQAVDH RHSFSLPSVD BACU010341/1-384 LSEFQLELSW SNRHLDHCLE HLVQYRSDRD HSWTEQAVDH RHSFSLPSVD 251 300 ENSP00000363318/1-369 GQKRYTFRVR SRFNPLCGSA QHWSEWSHPI HWGSNTSKEN ------PFLF ENSBTAP00000010033/1-379 AQKLYTFRVR SRYNPLCGSA QHWSDWSYPI HWGSNTSKEN IENPENPSLF ENSTTRP00000005054/1-364 AQKFYTFRVR SRYNPLCGSA QQWSDWSCPV HWGSNTSKEN ------PSLF bmy_08439T0/1-408 AQKFYTFRVR SRYNPLCGSA QHWSDWSFPV HWGSNTSKEN PENPETPSLF BACU010341/1-384 AQKFYTFRVR SRYNPLCGSA QHWSDWSCPV HWGSNTSKEN PESPETPSLF 301 350 ENSP00000363318/1-369 ALEAVVISVG SMGLIISLLC VYFWLERTMP RIPTLKNLED LVTEYHGNFS ENSBTAP00000010033/1-379 ALEAVLIPLG SMGLIVSLIC VYCWLERTMP RIPTLKNLED LVTEYQGNFS ENSTTRP00000005054/1-364 AWKAVLIPLV SMASIVILIC LYCWLERTMP RIPTLKNLED LVTEYHGNFS bmy_08439T0/1-408 AWKAVLIPLG SMAFIVSLIC LYCWLERTMP RIPTLKNLED LVTEYHGNFS BACU010341/1-384 AWKAVLIPLG SMAFIVSLIC LYCWLERTMP RIPTLKNLED LVTEYHGNFS 351 400 ENSP00000363318/1-369 AWSGVSKGLA ESLQPDYSER LCLVSEIPPK GGALGEGPGA SPCNQHSPYW ENSBTAP00000010033/1-379 AWSGVSKGLA ESLQPDYSER LCHVSEIPPK G---GEGPGG SPCSQHSPYW ENSTTRP00000005054/1-364 AWSGVSKGLA ESLQPDYSER LCHVSEIPPK G---GEGPGG SPCSQHSPYW bmy_08439T0/1-408 AWSGVSKGLA ESLQPDYSER LCHVSEIPPK G---GEGPGG SPCSQHSPYW BACU010341/1-384 AWSGVSKGLA ESLQPDYSER LCHVSEIPPK G---GEGPGG SPCSQHSPYW 401 450 ENSP00000363318/1-369 APPCYTLKPE T--- ENSBTAP00000010033/1-379 APPCYTLKPE P--- ENSTTRP00000005054/1-364 APPCYT---E T--- bmy_08439T0/1-408 APPCYTLKPE P--- BACU010341/1-384 APPCYTPREN PRAL