KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:40:03 2014 Check: 00 .. Name: ENSP00000305699/1-718 Len: 767 Check: 5746 Weight: 1.00 Name: ENSTTRP00000008406/1-710 Len: 767 Check: 9004 Weight: 1.00 Name: ENSBTAP00000010044/1-718 Len: 767 Check: 6628 Weight: 1.00 Name: bmy_21060T0/1-717 Len: 767 Check: 4241 Weight: 1.00 Name: BACU007764/1-678 Len: 767 Check: 5085 Weight: 1.00 // 1 50 ENSP00000305699/1-718 MFSVESLERA ELCESLLTWI QTFNVDAPCQ TVEDLTNGVV MAQVLQKIDP ENSTTRP00000008406/1-710 --------QV ELCESLLTWI QTFNVDAPCQ TXXXXXXXXX XXXXXXXXDP ENSBTAP00000010044/1-718 MFNVETLERA ELCESLLTWI QTFNVDAPCQ TVEDLTNGVV MAQVLQKIDP bmy_21060T0/1-717 ---------- ---------- ---------- ---------- MAQVLQKIDP BACU007764/1-678 ---------- ---------I QTFNVDAPCQ TVEDLTNGVV MAQVLQKIDP 51 100 ENSP00000305699/1-718 AYFDENWLNR IKTEVGDNWR LKISNLKKIL KGILDYNHEI LGQQINDFTL ENSTTRP00000008406/1-710 AYFDENWLNR IKTEVGDNWR LKISNLKKIL KGILDYNHEI LGQQINDFTL ENSBTAP00000010044/1-718 AYFDENWLNR IKTEVGDNWR LKISNLKKIL KGILDYNHEI LGQQINDFTL bmy_21060T0/1-717 AYFDENWLNR IKTEVGDNWR LKISNLKKIL KGILDYNHEI LGQQINDFTL BACU007764/1-678 AYFDENWLNR IKTEVGDNWR LKISNLKKIL KGILDYNHEI LGQQINDFTL 101 150 ENSP00000305699/1-718 PDVNLIGEHS DAAELGRMLQ LILGCAVNCE QKQEYIQAIM MMEESVQHVV ENSTTRP00000008406/1-710 PDVNLIGEHS DAAELGRMLQ LILGCAVNCE QKQEYIQAIM MMEESVQHVV ENSBTAP00000010044/1-718 PDVNLIAEHS DAAELGRMLQ LILGCAVNCE QKQEYIQAIM VMEESVQHVV bmy_21060T0/1-717 PDVNLVGEHS DAAELGRMLQ LILGCAVNCE QKQEYIQAIM MMEESVQHVV BACU007764/1-678 PDVNLVGEHS DAAELGRMLQ LILGCAVNCE QKQEYIQAIM MMEESVQHVV 151 200 ENSP00000305699/1-718 MTAIQELMSK ESPVSAGNDA YVDLDRQLKK TTEELNEALS AKEEIAQR-- ENSTTRP00000008406/1-710 MTAIQELMSK ESPVSAGNDA YVDLDRQLKK TSEELNEALS AKEEIAQR-- ENSBTAP00000010044/1-718 MTAIQELMSK ESPVSAGNDA YVDLDRQLKK TSEELNEALS AKEEIAQR-- bmy_21060T0/1-717 MTAIQELMSK ESPVSAGNDA YVDLDRQLKK TSEELNEALS AKEEIAQRCH BACU007764/1-678 MTAIQE---- ---------- -------LKK TSEELNEALS AKEEIAQR-- 201 250 ENSP00000305699/1-718 ---------- ---------- ---------- ---------- -------CHE ENSTTRP00000008406/1-710 ---------- ---------- ---------- ---------- -------CHE ENSBTAP00000010044/1-718 ---------- ---------- ---------- ---------- -------CHE bmy_21060T0/1-717 ELDLQLMSKE SPVSAGNDAY VDLDRQLKKT SEELNEALSA KEEIAQRCHE BACU007764/1-678 ---------- ---------- ---------- ---------- -------CHE 251 300 ENSP00000305699/1-718 LDMQVAALQE EKSSLLAENQ VLMERLNQSD SIEDPNSPAG RRHLQLQTQL ENSTTRP00000008406/1-710 LDLQVAALQE EKSSLLAENQ VLMERLNQSD SIEDPNSPAG RRHLQLQTQL ENSBTAP00000010044/1-718 LDLQVAALQE EKSSLLVENQ VLMERLNQSD SIEDPNSPAG RRHLQLQTQL bmy_21060T0/1-717 LDLQVAALQE EKSSLLAENQ VLMERLNQSD SIEDPNSPAG RRHLQLQTQ- BACU007764/1-678 LDLQVAALQE EKSSLLAENQ VLMERLNQSD SIEDPNSPAG RRHLQLQTQL 301 350 ENSP00000305699/1-718 EQLQEETFRL EAAKDDYRIR CEELEKEISE LRQQNDELTT LADEAQSLKD ENSTTRP00000008406/1-710 EQLQEETFRL EAAKDDYRIR CEELQKEMSE LRQQNDELTT LADDAQSLKD ENSBTAP00000010044/1-718 EQLQEETFRL EAAKDDYRIR CEELEKEISE LRQQNDELTT LADDAQSLKD bmy_21060T0/1-717 ---------L EAAKDDYRIR CEELQKEMSE LRQQNDELTT LADDAQSLKD BACU007764/1-678 EQLQEETFRL EAAKDDYRIR CEELQKEMSE LRQQNDELTT LADDAQSLKD 351 400 ENSP00000305699/1-718 EIDVLRHSSD KVSKLEGQVE SYKKKLEDLG DLRRQVKLLE EKNTMYMQNT ENSTTRP00000008406/1-710 EIDVLRHSSD KVSKLEGQVE SYKKKLEDLG DLRRQVKLLE EKNTMYMQNT ENSBTAP00000010044/1-718 EIDVLRHSSD KVSKLEGQVE SYKKKLEDLG DLRRQVKLLE EKNTMYMQNT bmy_21060T0/1-717 EIDVLRHSSD KVSKLEGQVE SYKKKLEDLG DLRRQVKLLE EKNTMYMQNT BACU007764/1-678 EIDVLRHSSD KVSKLEGQVE SYKKKLEDLG DLRRQVKLLE EKNTMYMQNT 401 450 ENSP00000305699/1-718 VSLEEELRKA NAARSQLETY KRQVVELQNR LSEESKKADK LDFEYKRLKE ENSTTRP00000008406/1-710 VSLEEELRKA NAARSQLETY KRQVVELQNR LSEESKKADK LDFEYKRLKE ENSBTAP00000010044/1-718 VSLEEELRKA NAARSQLETY KRQVVELQNR LSEESKKADK LDFEYKRLKE bmy_21060T0/1-717 VSLEEELRKA NAARSQLETY KRQVVELQNR LSEESKKADK LDFEYKRLKE BACU007764/1-678 VSLEEELRKA NAARSQLETY KRQVVELQNR LSEESKKADK LDFEYKRLKE 451 500 ENSP00000305699/1-718 KVDSLQKEKD RLRTERDSLK ETIEELRCVQ AQEGQLTTQG LMPLGSQESS ENSTTRP00000008406/1-710 KVDSLQKEKD RLRTERDSLK ETIEELRCVQ AQEGQLTTQG LMPLGSQESS ENSBTAP00000010044/1-718 KVDSLQKEKD RLRSERDSLK ETIEELRCVQ AQEGQLTTQG LMPLGSQESS bmy_21060T0/1-717 KVDSLQKEKD RLRTERDSLK ETIEELRCVQ AQEGQLTTQG LMPLGSQESS BACU007764/1-678 KVDSLQKEKD RLRTERDSLK ETIEELRCVQ AQEGQLTTQG LMPLGSQESS 501 550 ENSP00000305699/1-718 DSLAAEIVTP EIREKLIRLQ HENKMLKLNQ EGSDNEKIAL LQSLLDDANL ENSTTRP00000008406/1-710 DSLAAEIVTP EIREKLIRLQ HENKMLKINQ EGSDNEKIAL LQSLLDDASL ENSBTAP00000010044/1-718 DSLAAEIVTP EIREKLIRLQ HENKMLKINQ EGSDNEKIAL LQSLLDDANL bmy_21060T0/1-717 DSLAAEIVTP EIREKLIRLQ HENKMLKINQ EGSDNEKIAL LQSLLDDASL BACU007764/1-678 DSLAAEIVTP EIREKLIRLQ HENKMLKINQ EGSDNEKIAL LQSLLDDASL 551 600 ENSP00000305699/1-718 RKNELETENR LVNQRLLEVQ SQVEELQKSL QDQGSKAEDS VLLKKKLEEH ENSTTRP00000008406/1-710 RKNELETENR LVNQRLLEVQ SQVEELQKSL QDQGSKAEDS VLLKKKLEEH ENSBTAP00000010044/1-718 RKNELETENR LVNQRLLEVQ SQVEELQKSL QDQGSKAEDS VLLKKKLEEH bmy_21060T0/1-717 RKNELETENR LVNQRLLEVQ SQVEELQKSL QDQGSKAEDS VLLKKKLEEH BACU007764/1-678 RKNELETENR LVNQRLLEVQ SQVEELQKSL QDQGSKAEDS VLLKKKLEEH 601 650 ENSP00000305699/1-718 LEKLHEANNE LQKKRAIIED LEPRFNNSSL KIEELQEALR KKEEEMKQME ENSTTRP00000008406/1-710 LEKLHEANNE LQKKRAIIED LEPRFNNSSL KIEELQEALR KKEEEMKQME ENSBTAP00000010044/1-718 LEKLHEANNE LQKKRAIIED LEPRFNNSSL KIEELQEALR KKEEEMKQME bmy_21060T0/1-717 LEKLHEANNE LQKKRAIIED LEPRFNNSSL KIEELQEALR KKEEEMKQME BACU007764/1-678 LEKLHEANNE LQKKRAIIED LEPRFNNSSL KIEELQEALR KKEEEMKQME 651 700 ENSP00000305699/1-718 ERYKKYLEKA KSVIRTLDPK QNQGAAPEIQ ALKNQLQERD RLFHSLEKEY ENSTTRP00000008406/1-710 ERYKKYLEKA KSVIRTLDPK QNQGAAPEIQ ALKNQLHERD RQFYSLEKEY ENSBTAP00000010044/1-718 ERYKKYLEKA KSVIRTLDPK QNQGAAPEIQ ALKNQLQERD RQFHSLEKEY bmy_21060T0/1-717 ERYKKYLEKA KSVIRTLDPK QNQGAAPEIQ ALKNQLHERD RQFHSLEKEY BACU007764/1-678 ERYKKYLEKA KSVIRTLDPK QNQGAAPEIQ ALKNQLHERD RQFHSLEKEY 701 750 ENSP00000305699/1-718 EKTKSQREME EKYIVSAWYN MGMTLHKKAA EDRLASTGSG QSFLARQRQA ENSTTRP00000008406/1-710 EKTKSQREME EKYIVSAWYN MGMTLHKKAA EDRLASTGSG QSFLARQRQA ENSBTAP00000010044/1-718 EKTKSQREME EKYIVSAWYN MGMTLHKKAA EDRLASTGSG QSFLARQRQA bmy_21060T0/1-717 EKTKSQREME EKYIVSAWYN MGMTLHKKAA EDRLASTGSG QSFLARQRQA BACU007764/1-678 EKTKSQREME EKYIVSAWYN MGMTLHKKAA EDRLASTGSG QSFLARQRQA 751 800 ENSP00000305699/1-718 TSSRRSYPGH VQPATAR ENSTTRP00000008406/1-710 TSTRRSYPGH VQPATAR ENSBTAP00000010044/1-718 TSTRRSYPGH VQPATAR bmy_21060T0/1-717 TSTRRSYPGH VQPATAR BACU007764/1-678 TSTRRSYPGH VQPATAR