KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:40:04 2014 Check: 00 .. Name: ENSP00000424048/1-415 Len: 543 Check: 572 Weight: 1.00 Name: ENSBTAP00000010056/1-415 Len: 543 Check: 9087 Weight: 1.00 Name: bmy_16287T0/1-474 Len: 543 Check: 3656 Weight: 1.00 Name: ENSTTRP00000007832/1-515 Len: 543 Check: 56 Weight: 1.00 // 1 50 ENSP00000424048/1-415 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010056/1-415 ---------- ---------- ---------- ---------- ---------- bmy_16287T0/1-474 MAETSLLEAG ASAASTAAAL ENLQVEASCS VCLEYLKEPV IIECGHNFCK ENSTTRP00000007832/1-515 MAETSLLEAG ASAASTAAAL ENLQVEASCS VCLEYLKEPV IIECGHNFCK 51 100 ENSP00000424048/1-415 ---------- ---------- ---------- --------EI AKQLQAVKRK ENSBTAP00000010056/1-415 ---------- ---------- ---------- --------EI AKQLQAVKRK bmy_16287T0/1-474 ACITRWWEDL ERDFPCPVCR KTSRYRSLRP NRQLGSMVEI AKQLQAVKRK ENSTTRP00000007832/1-515 ACITRWWEDL ERDFPCPVCR KTSRYRSLRP NRQLGSMVEI AKQLQAVKRK 101 150 ENSP00000424048/1-415 IRDESLCPQH HEALSLFCYE DQEAVCLICA ISHTHRAHTV VPLDDATQEY ENSBTAP00000010056/1-415 IRDESLCPQH HEALSLFCYE DQEAVCLICA ISHTHRAHTV VPLDDATQEY bmy_16287T0/1-474 IRDESLCPQH HEALSLFCYE DQEAVCLICA ISHTHRAHTV VPLDDATQEY ENSTTRP00000007832/1-515 IRDESLCPQH HEALSLFCYE DQEAVCLICA ISHTHRAHTV VPLDDATQEY 151 200 ENSP00000424048/1-415 KEKLQKCLEP LEQKLQEITR CKSSEEKKPG ELKRLVESRR QQILREFEEL ENSBTAP00000010056/1-415 KEKLQKCLEP LEQKLQEISR CKSAEEKKPG ELKRLVESRR QQILKEFEEL bmy_16287T0/1-474 KEKLQKCLEP LERKLQEITR CKSSEEKKPG ELKRLVESRR QQILKEFEEL ENSTTRP00000007832/1-515 KEKLQKCLEP LERKLQEITR CKSSEEKKPG ELKRLVESRR QXXXXXXXXX 201 250 ENSP00000424048/1-415 HRRLDEEQQV LLSRLEEEEQ DILQRLRENA AHLGDKRRDL AHLAAEVEGK ENSBTAP00000010056/1-415 HRRLDEEQQV LLSRLEEEEQ DILQRLRENA AHLGDKRRDL AHLAAEVEGK bmy_16287T0/1-474 HRRLDEEQQV LLSRLEEEEQ DILQRLRENA AHLGDKRRDL AHLAAE---- ENSTTRP00000007832/1-515 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 251 300 ENSP00000424048/1-415 CLQSGFEMLK DVKSTLE--- ---------- ---------- ----KCEKVK ENSBTAP00000010056/1-415 CLQSGFEMLK DVKSTLE--- ---------- ---------- ----KCEKVK bmy_16287T0/1-474 ---------- DVKSTLE--- ---------- ---------- ----KCEKVK ENSTTRP00000007832/1-515 XXXXXXXXXX DVKSTLENST SRKFDLLRVC LGDHIAFHRA KESNKCEKVK 301 350 ENSP00000424048/1-415 TMEVTSVSIE LEKNFSNFPR QYFALRKILK QLIADVTLDP ETAHPNLVLS ENSBTAP00000010056/1-415 TMEVTSVSIE LEKNFSNFPR QYFALRKILK QLIADVTLDP ETAHPNLVLS bmy_16287T0/1-474 TMEVTSVSIE LEKNFSNFPR QYFALRKILK QLIADVTLDP ETAHPNLVLS ENSTTRP00000007832/1-515 TMEVTSVSIE LEKNFSNFPR QYFALRKILK QLIADVTLDP ETAHPNLVLS 351 400 ENSP00000424048/1-415 EDRKSVKFVE TRLRDLPDTP RRFTFYPCVL ATEGFTSGRH YWEVEAAHCV ENSBTAP00000010056/1-415 EDRKSVKFVE TRLRDLPDTP RRFTFYPCVL ATEGFTSGRH YWEVEAAHCV bmy_16287T0/1-474 EDRKSVKFVE TRLRDLPDTP QRFTFYPCVL ATEGFTSGRH YWEVEVG--- ENSTTRP00000007832/1-515 EDRKSVKFVE TRLRDLPDTP QRFTFYPCVL ATEGFTSGRH YWEVEVG--- 401 450 ENSP00000424048/1-415 LAQDPENQAL ARFYCYTERT IAKRLVLRRD PSVKRTLCR- ------GCSS ENSBTAP00000010056/1-415 LAQDPENQAL ARFYCHTERT IAKRLVLRRD PSVKRTLCR- ------GCSS bmy_16287T0/1-474 -----DKTHW AVGVCRD--S VSRKGELTPL PETGYWRVRL WNGDKYAATT ENSTTRP00000007832/1-515 -----DKTHW AVGVCRD--S VSRKGELTPL PETGYWRVRL WNGDKYAATT 451 500 ENSP00000424048/1-415 LLVPGLTCTQ RQRRC----R GQRWTVQTCL TCQRSQ--RF LNDPGHLLWG ENSBTAP00000010056/1-415 LLIPGLTCTQ RQRRC----K GQRWTVQTCL TCQRSQ--RF LNDPRHVLWG bmy_16287T0/1-474 TPFTPLHIKV KPKRVGIFLD YEAGTLSFYN VTDRSHIYTF TDTFTEKLW- ENSTTRP00000007832/1-515 TPFTPLHIKV KPRRVGIFLD YEAGTLSFYN VTDRSHIYTF TDTFTEKLW- 501 550 ENSP00000424048/1-415 DRPEAQLGSQ ADSKPLQPLP NTAHSISDRL PEEKMQTQGS SNQ ENSBTAP00000010056/1-415 DRPEAQLGNQ ADPKPPQPLP NTAHPIPAQL PKEKVQPQSS SHP bmy_16287T0/1-474 --PLFYPGIR AGRKNAAPL- ---------- ---TIRPPTD WE- ENSTTRP00000007832/1-515 --PLFYPGIR AGRKNAAPL- ---------- ---TIRPPTD WE-