KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:40:06 2014 Check: 00 .. Name: ENSP00000301904/1-606 Len: 652 Check: 7679 Weight: 1.00 Name: ENSBTAP00000010075/1-606 Len: 652 Check: 7207 Weight: 1.00 Name: ENSTTRP00000005672/1-502 Len: 652 Check: 3443 Weight: 1.00 Name: bmy_21263T0/1-607 Len: 652 Check: 8625 Weight: 1.00 Name: BACU015280/1-607 Len: 652 Check: 8363 Weight: 1.00 // 1 50 ENSP00000301904/1-606 ---------- ---------- ---------- ---------- -----MKVRS ENSBTAP00000010075/1-606 ---------- ---------- ---------- ---------- -----LSVRS ENSTTRP00000005672/1-502 LRHRAPLLRA ARRAAIRALR DPSASARVHG RSRLRRGPPE APEGTMKVRS bmy_21263T0/1-607 ---------- ---------- ---------- ---------- -----MKVRS BACU015280/1-607 ---------- ---------- ---------- ---------- -----MKVRS 51 100 ENSP00000301904/1-606 AGGDGDALCV TEEDLAGDDE -DMPTFPCTQ KGRPGPRCSR CQKNLSLHTS ENSBTAP00000010075/1-606 AAGDGDALCV TEEELAADDE -DMPSFPCTQ EGQPGPRCSR CQKNLSLHTS ENSTTRP00000005672/1-502 AAGDGDALCV TEEELAADDD EDMPSFPCTQ EGWPGPRCSR CQKNLSLHTS bmy_21263T0/1-607 AAGDGDALCV TEEELAADDD ADMPSFPCTQ EGRPGPRCSR CQKNLSLHTS BACU015280/1-607 AAGDGDALCV TEEELAADDD ADMPSFPCTQ EGRPGPRCSR CQKNLSLHTS 101 150 ENSP00000301904/1-606 VRILYLFLAL LLVAVAVLAS LVFRKVDSLS EDISLTQSIY DKKLVLMQKN ENSBTAP00000010075/1-606 VRILYLFLAL LLVAVAVLAS LVFRKVDSLS EDLSLAQAMY DKKLVSMQKN ENSTTRP00000005672/1-502 VRILYLFLAF LLVSVAVLAS LVFRKVDSLS EDISLAQALY DKKLVSMQEN bmy_21263T0/1-607 VRILYLFLAL LLVAVAVLAS LVFRKVDSLS EDISLAQALY DKKLVSMQEN BACU015280/1-607 VRILYLFLAL LLVAVAVLAS LVFRKVDSLS EDISLAQALY DKKLVSMQEN 151 200 ENSP00000301904/1-606 LQGLDPKALN NCSFCHEAGQ LGPEIRKLQE ELEGIQKLLL AQEVQLDQTL ENSBTAP00000010075/1-606 LQGLDLKARN NCSFCHEAGL LGQEIRKLQA ELEGIQKMLL AQEVQLHQTS ENSTTRP00000005672/1-502 LQGLELKAPN NCSFCHEAGQ LGQEIRKLQA ELEGIQKMLL AQEVQLDQTS bmy_21263T0/1-607 LQGLELKAPN NCSFCHEAGQ LGQEIRKLQA ELEGIQKMLL AQEVQLDQTS BACU015280/1-607 LQGLELKAPN NCSFCHEAGQ LGQEIRKLQA ELEGIQKMLL AQEVQLDQTS 201 250 ENSP00000301904/1-606 QAQEVLSTTS RQISQEMGSC SFSIHQVNQS LGLFLAQVRG WQATTAGLDL ENSBTAP00000010075/1-606 QTHDLLSTTS GQISQEMGSC SFSVHQINQS LGLFLAQVRG WQATTAGLDL ENSTTRP00000005672/1-502 QTHELLSTTS GQISQEMGNC SFSVHQINQS LGLFLAQVRG WQATTAGLDL bmy_21263T0/1-607 QTHELLSTTS GQISQEMGNC SFSIHQINQS LGLFLAQVRG WQATTAGLDL BACU015280/1-607 QTHELLSTTS GQISQEMGNC SFSIHQINQS LGLFLAQVRG WQATTAGLDL 251 300 ENSP00000301904/1-606 SLKDLTQECY DVKAAVHQIN FTVGQTSEWI HGIQRKTDEE TLTLQKIVTD ENSBTAP00000010075/1-606 SLKDLTQECY DVKAAVHQIN FTVGQTSEWI HGIRRKTDEE TLTLQKMVTD ENSTTRP00000005672/1-502 SLKDLTQECY NVKAAMHQIN FTVGQTSEWI HGIRRKTDEE TLTLQKMIAD bmy_21263T0/1-607 SLKDLTQECY XVKAAMHQIN FTVGQTSEWI HGIRRKTDEE TLTLQKMITD BACU015280/1-607 SLKDLTQECY NIKAAMHQIN FTVGQTSEWI HGIRRKTDEE TLTLQKMITD 301 350 ENSP00000301904/1-606 WQNYTRLFSG LRTTSTKTGE AVKNIQATLG ASSQRISQNS ESMHDLVLQV ENSBTAP00000010075/1-606 WQNYTRLFGS LRTTSAKTGE AVRSLQATLG ASSQRISQNS ESLHDLVLQA ENSTTRP00000005672/1-502 WQNYTRLFSS LRATSAKTGE AVKSLQATLG ASSQRISQNS ESMHDLVLQV bmy_21263T0/1-607 WQNYSRLFSS LRTTSAKTGE AVKSLQATLG ASSQRISQNS ESMHDLVLQV BACU015280/1-607 WQNYSRLFSS LRTTSAKTAE AVKSLQATLG ASSQRISQNS ESMHDLVLQV 351 400 ENSP00000301904/1-606 MGLQLQLDNI SSFLDDHEEN MHDLQYHTHY AQNRTVERFE SLEGRMASHE ENSBTAP00000010075/1-606 MGLQLQLDNI SSFLDDHEEN MHDLQYHTRY AQNRTVERFE TLEGRMASHE ENSTTRP00000005672/1-502 MGLQLQLDNI SSFLDDHEEN MHDLQYHTHY AQNRTVERFE TLEGRMASHE bmy_21263T0/1-607 MGLQLQLDNI SSFLDDHEEN MHDLQYHTHY AQNRTVERFE TLEGRMASHE BACU015280/1-607 MGLQLQLDNI SSFLDDHEEN MHDLQYHTHY AQNRTVERFE TLEGRMASHE 401 450 ENSP00000301904/1-606 IEIGTIFTNI NATDNHVHSM LKYLDDVRLS CTLGFHTHAE ELYYLNKSVS ENSBTAP00000010075/1-606 IEIGTIFTNI NATDSHVYSM LKYLDDVRLS CTLGFHTQAE ELYYLNKTVS ENSTTRP00000005672/1-502 IEIGTIFTNI NATDSHVYSM LKYLDDVRLS CTLGFHTQAE ELYYLNKTVS bmy_21263T0/1-607 IEIGTIFTNI NATDSHVYSM LKYLDDVRLS CTLGFHTQAE ELYYLNKTVS BACU015280/1-607 IEIGTIFTNI NATDSHVYSM LKYLDDVRLS CTLGFHTQAE ELYYLNKTVS 451 500 ENSP00000301904/1-606 IMLGTTDLLR ERFSLLSARL DLNVRNLSMI VEEMKAVDTQ HGEILRNVTI ENSBTAP00000010075/1-606 LMLAATDLLR ERFSLLSARL DLNVRNLSMI VEEMRAVDTR HGEILRNVTI ENSTTRP00000005672/1-502 LMLATTDLLR ERFGLLSARL DFNVRNLSMV MEEMKAVDTQ HGEILRNVTI bmy_21263T0/1-607 LMLATTDLLR ERFGLLSARL DFSVRNLSMI MEEMKAVDTQ HGEILRNVTI BACU015280/1-607 LMLATTDLLR ERFGLLSARL DFSIRNLSMV MEEMKAVDTQ HGEILRNVTI 501 550 ENSP00000301904/1-606 LRGAPGPPGP RGFKGDMGVK GPVGGRGPKG DPGSLGPLGP QGPQGQPGEA ENSBTAP00000010075/1-606 LRGAPGPPGP RGLKGDVGVK GPAGGKGPKG DPGSLGPPGP QGPQGQPGEP ENSTTRP00000005672/1-502 LR-------- ---------- ---------- ---------- ---------- bmy_21263T0/1-607 LRGXPGPPGP RGLKGDVGVK GPIGSRGPKG DPGSLGPPGP QGPQGQPGDA BACU015280/1-607 LRGAPGPPGP RGLKGDVGVK GPVGSRGPKG DPGSLGPPGP QGPQGQPGDT 551 600 ENSP00000301904/1-606 GPVGERGPVG PRGFPGLKGS KGSFGTGGPR GQPGPKGDIG PPGPEGPPGS ENSBTAP00000010075/1-606 GPVGERGPVG PRGFPGLKGS KGSFGTVGAR GQPGPKGDVG PPGPEGPPGA ENSTTRP00000005672/1-502 ---------- ---------- ---------- ---------- ---------- bmy_21263T0/1-607 GPVGERGPVG LQGFPGLKGS KGSFGTGGAR GQPGPKGDVG PPGPEGPPGS BACU015280/1-607 GPVGETGPVG LRGFPGLKGS KGSFGTGGAS GQPGPKGDVG PPGPEGPPGS 601 650 ENSP00000301904/1-606 PGPSGPQGKP GIAGKTGSPG QRGAMGPKGE PGIQGPPGLP GPPGPPGSQS ENSBTAP00000010075/1-606 PGPEGPQGEP GIAGKTGSPG QRGPMGPKGE PGIQGPPGFP GPPGPPGSQS ENSTTRP00000005672/1-502 ---------- ---------- ---------- ---------- ---------- bmy_21263T0/1-607 PGPEGPQGKP GIAGKIGSPG QRGPMGPKGE PGIQGRPGLP GPPGPPGSQS BACU015280/1-607 PGPEGPQGKP GIAGKIGSPG QRGPMGPKGE PGIEGPPGLP GPPGPPGSQS 651 700 ENSP00000301904/1-606 FY ENSBTAP00000010075/1-606 SY ENSTTRP00000005672/1-502 -- bmy_21263T0/1-607 RY BACU015280/1-607 RY