KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:40:06 2014 Check: 00 .. Name: bmy_09303T0/1-343 Len: 563 Check: 2780 Weight: 1.00 Name: ENSP00000355050/1-563 Len: 563 Check: 7936 Weight: 1.00 Name: ENSBTAP00000010077/1-563 Len: 563 Check: 7501 Weight: 1.00 Name: BACU015510/1-563 Len: 563 Check: 6930 Weight: 1.00 Name: ENSTTRP00000015873/1-563 Len: 563 Check: 6324 Weight: 1.00 // 1 50 bmy_09303T0/1-343 MDVGELLSYQ PNRGTKRPRD DEEEELKMRR RQAG------ ---------- ENSP00000355050/1-563 MDVGELLSYQ PNRGTKRPRD DEEEEQKMRR KQTGTRERGR YREEEMTVVE ENSBTAP00000010077/1-563 MDVGELLSYQ PNRGTKRPRD DEEEELKMRR RQAGTRERGR YREEEMTVVE BACU015510/1-563 MDVGELLSYQ PNRGTKRPRD DEEEELKMRR RQAGTRERGR FREEETTVVE ENSTTRP00000015873/1-563 MDVGELLSYQ PNRGTKRPRD DEEEELKMRR RQAGTRERGR FREEEMTVVE 51 100 bmy_09303T0/1-343 --------II PLY------- --EEEPLDES SVKKMILTFE KRSYKNQELR ENSP00000355050/1-563 EADDDKKRLL QIIDRDGEEE EEEEEPLDES SVKKMILTFE KRSYKNQELR ENSBTAP00000010077/1-563 EADDDKKRLL QIIDREGEEE EEEEEPLDES SVKKMILTFE KRSYKNQELR BACU015510/1-563 EADDDKKRLL QIIDREGEEE EEEEEPLDES SVKKMILTFE KRSYKNQELR ENSTTRP00000015873/1-563 EADDDKKRLL QIIDREGEEE EEEEEPLDES SVKKMILTFE KRSYKNQELR 101 150 bmy_09303T0/1-343 IKFPDNPEKF MESELDLNDI IQEMHVVATM PDLYHLLVEL NAVQSLLGLL ENSP00000355050/1-563 IKFPDNPEKF MESELDLNDI IQEMHVVATM PDLYHLLVEL NAVQSLLGLL ENSBTAP00000010077/1-563 IKFPDNPEKF MESELDLNDI IQEMHVVATM PDLYHLLVEL NAVQSLLGLL BACU015510/1-563 IKFPDNPEKF MESELDLNDI IQEMHVVATM PDLYHLLVEL NAVQSLLGLL ENSTTRP00000015873/1-563 IKFPDNPEKF MESELDLNDI IQEMHVVATM PDLYHLLVEL NAVQSLLGLL 151 200 bmy_09303T0/1-343 GHDNTDI--- LSELSSELTD IDTLHESEEG AEVLIDALVD GQVVALLVQN ENSP00000355050/1-563 GHDNTDVSIA VVDLLQELTD IDTLHESEEG AEVLIDALVD GQVVALLVQN ENSBTAP00000010077/1-563 GHDNTDVSIA VVDLLQELTD IDTLHESEEG AEVLTDALVD GQVVALLVQN BACU015510/1-563 GHDNTDVSIA VVDLLQELTD IDTLHESEEG AEVLIDALVD GQVVALLVQN ENSTTRP00000015873/1-563 GHDNTDVSIA VVDLLQELTD IDTLHESEEG AEVLIDALVD GQVVALLVQN 201 250 bmy_09303T0/1-343 LERLDESVKE EADGVHNTLA IVENMAEFRP EMCTEAAQQG LLQWLLKRLK ENSP00000355050/1-563 LERLDESVKE EADGVHNTLA IVENMAEFRP EMCTEGAQQG LLQWLLKRLK ENSBTAP00000010077/1-563 LERLDESVKE EADGVHNTLA IVENMAEFRP EMCTEAAQQG LLQWLLKRLK BACU015510/1-563 LERLDESVKE EADGVHNTLA IVENMAEFRP EMCTEAAQQG LLQWLLKRLK ENSTTRP00000015873/1-563 LERLDESVKE EADGVHNTLA IVENMAEFRP EMCTEAAQQG LLQWLLKRLK 251 300 bmy_09303T0/1-343 AKMPFDANKL YCSEVLAILL QDNDENRELL GELDGIDVLL QQLSVFKRHN ENSP00000355050/1-563 AKMPFDANKL YCSEVLAILL QDNDENRELL GELDGIDVLL QQLSVFKRHN ENSBTAP00000010077/1-563 AKMPFDANKL YCSEVLAILL QDNDENRELL GELDGIDVLL QQLSVFKRHN BACU015510/1-563 AKMPFDANKL YCSEVLAILL QDNDENRELL GELDGIDVLL QQLSVFKRHN ENSTTRP00000015873/1-563 AKMPFDANKL YCSEVLAILL QDNDENRELL GELDGIDVLL QQLSVFKRHN 301 350 bmy_09303T0/1-343 PSTAEEQEMM ENLFDSLCSC LMLSSNRERF LKGEGLQLMN LMLR------ ENSP00000355050/1-563 PSTAEEQEMM ENLFDSLCSC LMLSSNRERF LKGEGLQLMN LMLREKKISR ENSBTAP00000010077/1-563 PSTAEEQEMM ENLFDSLCSC LMLSSNRERF LKGEGLQLMN LMLREKKISR BACU015510/1-563 PSTAEEQEMM ENLFDSLCSC LMLSSNRERF LKGEGLQLMN LMLREKKISR ENSTTRP00000015873/1-563 PSTAEEQEMM ENLFDSLCSC LMLSSNRERF LKGEGLQLMN LMLREKKISR 351 400 bmy_09303T0/1-343 -----YASYL LLSPSSPS-- ---------- ---------- ---------- ENSP00000355050/1-563 SSALKVLDHA MIGPEGTDNC HKFVDILGLR TIFPLFMKSP RKIKKVGTTE ENSBTAP00000010077/1-563 SSALKVLDHA MIGPEGTDNC HKFVDILGLR TIFPLFMKSP RKIKKVGTTE BACU015510/1-563 SSALKVLDHA MIGPEGTDNC HKFVDILGLR TIFPLFMKSP RKIKKVGTTE ENSTTRP00000015873/1-563 SSALKVLDHA MIGPEGTDNC HKFVDILGLR TIFPLFMKSP RKIKKVGTTE 401 450 bmy_09303T0/1-343 ---------- ---------- ---------- ---------- ---------- ENSP00000355050/1-563 KEHEEHVCSI LASLLRNLRG QQRTRLLNKF TENDSEKVDR LMELHFKYLG ENSBTAP00000010077/1-563 KEHEEHVCSI LASLLRNLRG QQRTRLLNKF TENDSEKVDR LMELHFKYLD BACU015510/1-563 KEHEEHVCSI LASLLRNLRG QQRTRLLNKF TENDSEKVDR LMELHFKYLD ENSTTRP00000015873/1-563 KEHEEHVCSI LASLLRNLRG QQRTRLLNKF TENDSEKVDR LMELHFKYLD 451 500 bmy_09303T0/1-343 ---------- ---------- ---------- FFAQLLTVSL ---------- ENSP00000355050/1-563 AMQVADKKIE GEKHDMVRRG EIIDNDTEEE FYLRRLDAGL FVLQHICYIM ENSBTAP00000010077/1-563 AVQVADKKIE GEKHDMVRRG EIIDNDIEDE FYLRRLDAGL FVLQHICYIM BACU015510/1-563 AMQVADKKIE GEKHDMVRRG EIIDNDIEDE FYLRRLDAGL FVLQHICYIM ENSTTRP00000015873/1-563 AMQVADKKIE GEKHDMVRRG EIIDNDIEDE FYLRRLDAGL FVLQHICYIM 501 550 bmy_09303T0/1-343 ---------- ---------- ---------- ---------- -DSRTCSY-- ENSP00000355050/1-563 AEICNANVPQ IRQRVHQILN MRGSSIKIVR HIIKEYAENI GDGRSPEFRE ENSBTAP00000010077/1-563 AEICNANVPQ IRQRVHQILN MRGSSIKIVR HIIKEYAENI GDGRSPEFRE BACU015510/1-563 AEICNANVPQ IRQRVHQILN MRGSSIKIVR HVIKEYAENI GDGRSPEFRE ENSTTRP00000015873/1-563 AEICNANVPQ IRQRVHQILN MRGSSIKIVR HIIKEYAENI GDGRSPEFRD 551 600 bmy_09303T0/1-343 -------GLL FH- ENSP00000355050/1-563 NEQKRILGLL ENF ENSBTAP00000010077/1-563 SEQKRILALL ENF BACU015510/1-563 SEQKRILGLL ENF ENSTTRP00000015873/1-563 SEQKRILGLL ENF