KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:40:08 2014 Check: 00 .. Name: bmy_15057T0/1-298 Len: 379 Check: 2809 Weight: 1.00 Name: ENSP00000314036/1-378 Len: 379 Check: 826 Weight: 1.00 Name: BACU011740/1-236 Len: 379 Check: 61 Weight: 1.00 Name: ENSBTAP00000010089/1-378 Len: 379 Check: 4261 Weight: 1.00 Name: ENSTTRP00000011412/1-378 Len: 379 Check: 1265 Weight: 1.00 // 1 50 bmy_15057T0/1-298 MALSAPL--- -------SWI PASSGGSVED FSTSHSHLVN RLTAVIRQVT ENSP00000314036/1-378 MDLAGLLKSQ FLCHLVFCYV FIASGLIINT IQLFTLLLWP INKQLFRKI- BACU011740/1-236 MDLIALLKSQ FLCHLIFCYV FIASGLIINT IQLFTLLLWP INKQLFRKI- ENSBTAP00000010089/1-378 MDLVALLKSH FLCHLIFCYV FIVSGLIINT IQLCTLLLWP VNKQLFRKI- ENSTTRP00000011412/1-378 MDLIALLKSQ FLCHLIFCYV FIASGLIINT IQLFTLLLWP INKQLFRKI- 51 100 bmy_15057T0/1-298 EGQGAGTMKT SLLT-----G GDGCGAGQEA SHSLKPTRG- ---------- ENSP00000314036/1-378 NCRLSYCISS QLVMLLEWWS GTECTIFTDP RAYLKYGKEN AIVVLNHKFE BACU011740/1-236 NCRLSYCISS QLVMLLEWWS GTECVIHTDP QAYPKYGKEN AIVVLNHKFE ENSBTAP00000010089/1-378 NCRLSYCVSS QLVMLLEWWS GTECVIYTDP RAYPKYGKEN AIVVLNHKFE ENSTTRP00000011412/1-378 NCRLSYCISS QLVMLLEWWS GTECIIHTDP RAYPKYGKEN AIVVLNHKFE 101 150 bmy_15057T0/1-298 ---LSGWPLD GSCGGV-GSK VLAKKELAYV PIIGWMWYFT EMVFCTRKWE ENSP00000314036/1-378 IDFLCGWSLS ERFGLLGGSK VLAKKELAYV PIIGWMWYFT EMVFCSRKWE BACU011740/1-236 IDFLCGWSLA ERFGVLGGSK VLAKKELAYV PIIGWMWYFT EMVFCTRKWE ENSBTAP00000010089/1-378 IDFLCGWSLA ERFGVLGGSK VLAKKELAYV PIIGWMWYFT EMVFCTRKWE ENSTTRP00000011412/1-378 IDFLCGWSLA ERFGVLGGSK VLAKKELAYV PIIGWMWYFT EMVFCTRKWE 151 200 bmy_15057T0/1-298 QDRKTVSESL LHLRDYPEKY FFLIHCEGTR FTEKKHQISM QVAQAKGLPS ENSP00000314036/1-378 QDRKTVATSL QHLRDYPEKY FFLIHCEGTR FTEKKHEISM QVARAKGLPR BACU011740/1-236 QDRKTVSESL LHLRDYPEKY FFLIHCEGTR FTEKKHQISM QVAQAKGLPG ENSBTAP00000010089/1-378 QDRKTVSESL LHLRDYPEKY FFLIHCEGTR FTEKKHQISM QVAQAKGLPS ENSTTRP00000011412/1-378 QDRKTVSESL LHLRDYPEKY FFLIHCEGTR FTEKKHQISM QVAQAKGLPS 201 250 bmy_15057T0/1-298 LKHHLLPRTK GFAITVRSLR NVVSAVYDCT LNFRNNENPT LLGVLNGKKY ENSP00000314036/1-378 LKHHLLPRTK GFAITVRSLR NVVSAVYDCT LNFRNNENPT LLGVLNGKKY BACU011740/1-236 LKHHLLPRTK GFAITVRSLR NNVV----CT ---------- ---------- ENSBTAP00000010089/1-378 LKHHLLPRTK GFAVTVRSLR NVVSAVYDCT LNFRNNENPT LLGVLNGKKY ENSTTRP00000011412/1-378 LKHHLLPRTK GFAITVRSLR NVVSAVYDCT LNFRNNENPT LLGVLNGKKY 251 300 bmy_15057T0/1-298 HADLYVRRIP LGEVPEDEDR CAAWLHKLYQ EKQRL----- ----LPDAGQ ENSP00000314036/1-378 HADLYVRRIP LEDIPEDDDE CSAWLHKLYQ EKDAFQEEYY RTGTFPETPM BACU011740/1-236 ------QRRT FG-------- ---------- -------QYR KA-------- ENSBTAP00000010089/1-378 HADLYVRRIP LEEVPEEEDK CAAWLHKLYQ EKDAFQEEYS RTGTFPETPV ENSTTRP00000011412/1-378 HADLYVRRIP LGEVPEDEDR CAAWLHKLYQ EKDALQEEYS RTGTFPGTPM 301 350 bmy_15057T0/1-298 FRPR------ ---------- ---------- ---------- ------LLPS ENSP00000314036/1-378 VPPRRPWTLV NWLFWASLVL YPFFQFLVSM IRSGSSLTLA SFILVFFVAS BACU011740/1-236 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010089/1-378 VPPRRPWTLV NWLFWASMLL YPFFRFVVNM VSSGSSLTLA SFVLVFFVAS ENSTTRP00000011412/1-378 VPPRRPWTLV NWLFWASLLL YPFFRFLVNM VRSGSSLTLA SFVLVFFVAS 351 400 bmy_15057T0/1-298 VGVRWMIGVT EIDKGSAYGN MDSKQKHSD ENSP00000314036/1-378 VGVRWMIGVT EIDKGSAYGN SDSKQKLND BACU011740/1-236 ---------- ---------- --------- ENSBTAP00000010089/1-378 MGVRWMIGVT EIDKGSAYGN MDSKQKHSD ENSTTRP00000011412/1-378 VGVRWMIGVT EIDKGSAYGN MDSKQKHGD