KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:40:09 2014 Check: 00 .. Name: ENSP00000311492/1-245 Len: 263 Check: 6708 Weight: 1.00 Name: ENSBTAP00000010095/1-246 Len: 263 Check: 7151 Weight: 1.00 Name: ENSTTRP00000010765/1-245 Len: 263 Check: 6290 Weight: 1.00 Name: bmy_01184T0/1-189 Len: 263 Check: 3392 Weight: 1.00 Name: BACU000884/1-226 Len: 263 Check: 8423 Weight: 1.00 // 1 50 ENSP00000311492/1-245 MCAEVGPALC RGMERNSLGC CEAPKKLSLS FSIEAILKRP ARRSDMDRPE ENSBTAP00000010095/1-246 ---------- REMERKSFGC YEAPKKRGLS FSIEDILKRP AERSDVVKPE ENSTTRP00000010765/1-245 -GAKAGPALH GGMEKKSSGC CEAPKKRGLS FSIEEILKRP AERRDAVRPE bmy_01184T0/1-189 ---------- ---------- ---------- ---------- ---------- BACU000884/1-226 ---------- --MEKKSSGC CGAPKKRGLS FSIEEILKRP AERSDAVRPE 51 100 ENSP00000311492/1-245 GPGEEGPGEA AASGSGLEKP PKDQPQEGRK SKRRVRTTFT TEQLHELEKI ENSBTAP00000010095/1-246 GASGQGTRQA TAADFGPERP QQDQPKEGKK GKRRLRTTFT TEQLQELEKV ENSTTRP00000010765/1-245 GADGQGTGQA AAADSGPERL PHDQPQEERK GKRRIRTTFT TEQLHELEKI bmy_01184T0/1-189 ---------- ---------- ---MSKKERK GKRRIRTTFT TEQLHELEKI BACU000884/1-226 GA-------- ---------- ------EERK GKRRIRTTFT TEQLHELEKI 101 150 ENSP00000311492/1-245 FHFTHYPDVH IRSQLAARIN LPEARVQIWF QNQRAKWRKQ EKIGNLGAPQ ENSBTAP00000010095/1-246 FHFTHYPDIH VRNQLAARIN LPEARVQIWF QNQRAKWRKQ EKTNSLGALQ ENSTTRP00000010765/1-245 FHFTHYPDAY VRNQLAARIN LPEARVQIWF QNQRAKWRKQ -KTSSLGASP bmy_01184T0/1-189 FHFTHYPDVH VRNQLAARIN LPEARVQIWF QNQRAKWRKQ EKTSSLGASP BACU000884/1-226 FHFTHYPDVH VRNQLAARIN LPEARVQIWF QNQRAKWRKQ EKTSSLGASP 151 200 ENSP00000311492/1-245 QLSEASVALP TNLDVAGPTW TSTALRRLAP PTSCCPSAQD QLASAWFPAW ENSBTAP00000010095/1-246 LPSEAGLAPS TNPDVAGPML PPPAQPRLLP LTRCCPRAQ- ----AWLPTQ ENSTTRP00000010765/1-245 QPSEADLAPP TNPDVVGPML LPPSRPRLAP PTGCYLPAQG QLASAWLPTR bmy_01184T0/1-189 QPSEADLAPP TNPDVVGPML LPPARPRLAP PIGWYPPAQG QLASAWLPAR BACU000884/1-226 QPSEADLAPP TNPDVVGPML LPPARPRLAP PIGWYPPAQG QLASAWLPAR 201 250 ENSP00000311492/1-245 ITLLPAHPWE TQPVPG-LPI HQTCIPVLCI LPPPHPKWGS -ICATS-T-- ENSBTAP00000010095/1-246 IALLPCHPWE TQPLPGPLII QQTCIPTFC- FPPPHPRGGS -ICTTSITQT ENSTTRP00000010765/1-245 IALLPCHPWE TQPLPGPLII QQTCIPALCF FSPPHPKWGN -ICATS-TQ- bmy_01184T0/1-189 IALLPCHPWE TQPLPGPLII QQTCIPALCF FCTSAPQMGQ HLCHFH-TGT BACU000884/1-226 IALLPCHPWE TQPLPGPLIM QQTCIPALCF FCTSAPQMGQ HLCHFH-TGT 251 300 ENSP00000311492/1-245 ---------- --- ENSBTAP00000010095/1-246 GHPLLSGASL LSR ENSTTRP00000010765/1-245 ---------- --- bmy_01184T0/1-189 RHPLLSGAAL FSR BACU000884/1-226 RHPLLSGAAL FSR