KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:40:09 2014 Check: 00 .. Name: ENSTTRP00000015342/1-351 Len: 396 Check: 7518 Weight: 1.00 Name: bmy_06194T0/1-335 Len: 396 Check: 4965 Weight: 1.00 Name: ENSP00000364946/1-352 Len: 396 Check: 7083 Weight: 1.00 Name: ENSBTAP00000010101/1-352 Len: 396 Check: 7718 Weight: 1.00 // 1 50 ENSTTRP00000015342/1-351 ---------- ---------- ---------- ---------- ----MIPFFF bmy_06194T0/1-335 MRRSGVTSQG EAGVPAFRTR ALRSSRRPGP KALRPRRAAL PARAMNTIVF ENSP00000364946/1-352 ---------- ---------- ---------- ---------- ----MNTIVF ENSBTAP00000010101/1-352 ---------- ---------- ---------- ---------- ----MNTIVF 51 100 ENSTTRP00000015342/1-351 YKLSGALLFE DRGAPERERG GRPYCGVLDS THSRPEVGIT DGAPLKDNLV bmy_06194T0/1-335 NKLSGAVLFE DRGAPERERG GRPYGGVLDS THARPEVGIT DGAPLKDNLG ENSP00000364946/1-352 NKLSGAVLFE DGGASERERG GRPYSGVLDS PHARPEVGIP DGPPLKDNLG ENSBTAP00000010101/1-352 NKLSGAVLFE DRGAPERDRG GRPYGGVLDS PHARPEVGIT DGPPLKDNLG 101 150 ENSTTRP00000015342/1-351 QRHRRTGARQ NGGKVRHKRQ ALQDMARPLK QWLYKHRDNP YPTKTEK-LL bmy_06194T0/1-335 LRHRRTGARQ NGGKVRHKRQ ALQDMARPLK QWLYKHRDNP YPTKTEKILL ENSP00000364946/1-352 LRHRRTGARQ NGGKVRHKRQ ALQDMARPLK QWLYKHRDNP YPTKTEKILL ENSBTAP00000010101/1-352 LRHRRTGARQ NGGKVRHKRQ ALQDMARPLK QWLYKHRDNP YPTKTEKILL 151 200 ENSTTRP00000015342/1-351 ALGSQMTLVQ VSNWFANARR RLKNTVRQPD LSWALRIKLY NKYVQGNAER bmy_06194T0/1-335 ALGSQMTLVQ VSNWFANARR RLKNTVRQPD LSWALRIKLY NKYVQGNAER ENSP00000364946/1-352 ALGSQMTLVQ VSNWFANARR RLKNTVRQPD LSWALRIKLY NKYVQGNAER ENSBTAP00000010101/1-352 ALGSQMTLVQ VSNWFANARR RLKNTVRQPD LSWALRIKLY NKYVQGNAER 201 250 ENSTTRP00000015342/1-351 LSVSSDDSCS EDGENPPRNH MNEEGYNNPV HHPVIKSESS VIKAGVRPES bmy_06194T0/1-335 LSVSSDDSCS EDGENPPRNH MNEEGYNNPV HHPVIKSESS VIKAGVRPES ENSP00000364946/1-352 LSVSSDDSCS EDGENPPRTH MNEGGYNTPV HHPVIKSENS VIKAGVRPES ENSBTAP00000010101/1-352 LSVSSDDSCS EDGENPPRNH MNDGGYNNPV HHPVIKSESS VIKAGVRPES 251 300 ENSTTRP00000015342/1-351 RANEDYVSPP KYKSSLLNRY LNDSLRHVMV TNAAMMGKTR QRNHSGSFSS bmy_06194T0/1-335 RANEDYVSPP KYKSSLLNRY LNDSLRHVMV TNAAMMGKTR QRNHSGSFSS ENSP00000364946/1-352 RASEDYVAPP KYKSSLLNRY LNDSLRHVMA TNTTMMGKTR QRNHSGSFSS ENSBTAP00000010101/1-352 RASEDYVSPP KYKSSLLNRY LNDSLRHVMV TNAAMMGKTR QRNHSGSFSS 301 350 ENSTTRP00000015342/1-351 NEFEEELVSP SSSETEGNFV YRTDTLENRS SKGDSAANRK GPSKDDTYWK bmy_06194T0/1-335 NEFEEELVSP SSSETEGNFV YRT------- ---------- ---------- ENSP00000364946/1-352 NEFEEELVSP SSSETEGNFV YRTDTLENGS NKGESAANRK GPSKDDTYWK ENSBTAP00000010101/1-352 NEFEEELVSP SSSETEGNFV YRTDTLENGS NKGDSAATRK GPSKDDTYWK 351 400 ENSTTRP00000015342/1-351 EINAAMALTN LAQGKDKLQG TTSCIIQKSS HIAEVKTVKV PLVQQF bmy_06194T0/1-335 ---------- ---------- -----VREKG DISKKYT--- ------ ENSP00000364946/1-352 EINAAMALTN LAQGKDKLQG TTSCIIQKSS HIAEVKTVKV PLVQQF ENSBTAP00000010101/1-352 EINAAMALTN LAQGKDKPQG TTSCIIQKSS HIAEVKTVKV PLVPQF