KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:40:13 2014 Check: 00 .. Name: ENSTTRP00000004791/1-502 Len: 526 Check: 2064 Weight: 1.00 Name: ENSP00000231420/1-514 Len: 526 Check: 9355 Weight: 1.00 Name: ENSBTAP00000010113/1-514 Len: 526 Check: 9727 Weight: 1.00 Name: bmy_17614T0/1-429 Len: 526 Check: 5495 Weight: 1.00 // 1 50 ENSTTRP00000004791/1-502 ---------R ALYLET-TLR TPKTRPSPKV GAFWTSVTKL GLHTKPSMPP ENSP00000231420/1-514 MTLIWRHLLR PLCLVTSAPR ILEMHPFLSL GTSRTSVTKL SLHTKPRMPP ENSBTAP00000010113/1-514 MTGAWGHLLR SLHLKTLSLW IPKTCFSLKA RAFWTSVTRC GLHTKPSMPP bmy_17614T0/1-429 ---------- -----MACVV LGGTCPL--- -ALWVTLLFC ---------- 51 100 ENSTTRP00000004791/1-502 CDFTPERYQS LAYNRVLEIH KQHLSPVLTA YFSEPLLLHQ GYMEWLFDYE ENSP00000231420/1-514 CDFMPERYQS LGYNRVLEIH KEHLSPVVTA YFQKPLLLHQ GHMEWLFDAE ENSBTAP00000010113/1-514 CDFTPERYQS LAYSRVLEIH KQHLSPVHTA YFPEPLLLHQ GHVEWLFDHE bmy_17614T0/1-429 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000004791/1-502 GNRYLDFFSG IVTVSVGHCH PKVNAVAQKQ LGRLWHTSAV FFHPPIHEYA ENSP00000231420/1-514 GSRYLDFFSG IVTVSVGHCH PKVNAVAQKQ LGRLWHTSTV FFHPPMHEYA ENSBTAP00000010113/1-514 GNRYLDFFSG IVTVSVGHCH PKVNAAAQRQ LGRLWHTSSV FFHPLIHEYA bmy_17614T0/1-429 ---------- --------LS RKVNAVAQKQ LGRLWHTSAV FFHPPIHEYA 151 200 ENSTTRP00000004791/1-502 EKLSALLPEP --VIFLMNSG SEANDLAMLM ARAHSNNTDI ISFRGAYHGC ENSP00000231420/1-514 EKLAALLPEP LKVIFLVNSG SEANELAMLM ARAHSNNIDI ISFRGAYHGC ENSBTAP00000010113/1-514 EKLSALLPEP LKVVFLVNSG SEANDLAMLM ARAHSNSTDI ISFRGAYHGC bmy_17614T0/1-429 EKLSALLPEP LKVIFLMNSG SEANDLAMLM ARAHSNNTDI ISFRGAYHGC 201 250 ENSTTRP00000004791/1-502 SPYTLGLTNV GFYKMELPSG MGCQSTMCPD VFRGPWGGSH CRDSPVQTIR ENSP00000231420/1-514 SPYTLGLTNV GTYKMELPGG TGCQPTMCPD VFRGPWGGSH CRDSPVQTIR ENSBTAP00000010113/1-514 SPYTLGLTNV GIYKMDLPHG MGCQPTMCPD IFHGPWGGSH CRDSPVQTIR bmy_17614T0/1-429 SPYTLGLTNV GFYKMELPSG MGCQSTMCPD VFCGPWGGSH CRDSPVQTIR 251 300 ENSTTRP00000004791/1-502 KCSCAP---- --------DC CQAKDQYIEQ FKDTLNTSVA KSIAGFFAEP ENSP00000231420/1-514 KCSCAP---- --------DC CQAKDQYIEQ FKDTLSTSVA KSIAGFFAEP ENSBTAP00000010113/1-514 KCSCAP---- --------DC CQAKDQYIEQ FKDTLSTSVA KSIAGFFAEP bmy_17614T0/1-429 KCSCAPGPAG QGGRHMVEDC CQAKDQYIEQ FKDTLSTSVA KSIAGFFAEP 301 350 ENSTTRP00000004791/1-502 IQXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXVQTGFGR LGSHFWGFQT ENSP00000231420/1-514 IQGVNGVVQY PKGFLKEAFE LVRARGGVCI ADEVQTGFGR LGSHFWGFQT ENSBTAP00000010113/1-514 IQGVNGVVQY PKGFLKEAFE LVRERGGVCI ADEVQTGFGR LGSHFWGFQT bmy_17614T0/1-429 IQGVNGVVQY PKGFLKEAFE LVRERGGVCI ADEVQTGFGR LGSHFWGFQT 351 400 ENSTTRP00000004791/1-502 HGVLPDIVTM AKGIGNGFPM AAVVTTPEIA KSLAKRLLHF NTFGGNPMAC ENSP00000231420/1-514 HDVLPDIVTM AKGIGNGFPM AAVITTPEIA KSLAKCLQHF NTFGGNPMAC ENSBTAP00000010113/1-514 HDVLPDIVTM AKGIGNGFPM AAVVTTPDIA KSLTKRMLHF NTFGGNPMAC bmy_17614T0/1-429 HGVLPDIVTM AKGIGNGFPM AAVVTTPEIA QSLAKRLLHF NTFGGNPMAC 401 450 ENSTTRP00000004791/1-502 AIGSSVLEVI KEENLQENSQ EVGTYMLLKF AKLRDEFEIV GDVRGKGLMI ENSP00000231420/1-514 AIGSAVLEVI KEENLQENSQ EVGTYMLLKF AKLRDEFEIV GDVRGKGLMI ENSBTAP00000010113/1-514 AVGSAVLEVI KEENLQENSQ EVGTYMLLKL AKLRDEFEIV GDVRGKGLMI bmy_17614T0/1-429 XIGSSVLEVI KEENLQENSQ EVGTYMLLKF AKLRDEFEIV GDVRGKGLMI 451 500 ENSTTRP00000004791/1-502 GIEMVKDKTS RQPLPREEVN QIHQDCKRMG LLIGRGGTFS QTFRIAPSMC ENSP00000231420/1-514 GIEMVQDKIS CRPLPREEVN QIHEDCKHMG LLVGRGSIFS QTFRIAPSMC ENSBTAP00000010113/1-514 GIEMVKDKES HQPLPREEVN QIHHDCKCMG LLIGRGGLFS QTFRIAPSMC bmy_17614T0/1-429 GIEMVKDKTS RQPLPREEVN QIHQDCKRMG LLIGRGGTFS QTFRIAPSMC 501 550 ENSTTRP00000004791/1-502 ITKPEVDFAV EVFRSALIQH VESRDK ENSP00000231420/1-514 ITKPEVDFAV EVFRSALTQH MERRAK ENSBTAP00000010113/1-514 ITKPEVDFAV EVFRSALIQH MERRAK bmy_17614T0/1-429 ITKPEVDFAV EVFRSALLQH MERQAK