KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:40:14 2014 Check: 00 .. Name: ENSBTAP00000010129/1-260 Len: 285 Check: 3255 Weight: 1.00 Name: ENSP00000424123/1-281 Len: 285 Check: 1513 Weight: 1.00 Name: ENSTTRP00000000009/1-283 Len: 285 Check: 680 Weight: 1.00 Name: bmy_11405T0/1-252 Len: 285 Check: 4004 Weight: 1.00 Name: BACU018317/1-262 Len: 285 Check: 8829 Weight: 1.00 // 1 50 ENSBTAP00000010129/1-260 ---------- ---------- -DPRVEDWLL MSSPLPQTII LGFYVYFVTS ENSP00000424123/1-281 MAFSDLTSRT VHLYDNWIKD ADPRVEDWLL MSSPLPQTIL LGFYVYFVTS ENSTTRP00000000009/1-283 MAFSDLTSRT VRLYGNWIKD ADPRVEDWLL MSSPLPQTVI LGLYVYFVTS bmy_11405T0/1-252 MAFSDLTSRT VRLYGNWIKD ADPRVEDWLL MSSPLPQTII LGLYVYFVTS BACU018317/1-262 ---------- ---------- -DPRVEDWLL MSSPLPQTII LGLYVYFVTS 51 100 ENSBTAP00000010129/1-260 LGPKLMENRK PFELKKVMIT YNFSIVLFSV YMFYE--FIM SGWGTGYSFR ENSP00000424123/1-281 LGPKLMENRK PFELKKAMIT YNFFIVLFSV YMCYE--FVM SGWGIGYSFR ENSTTRP00000000009/1-283 LGPKLMENRK PFELKKAMIT YNFFIVLFSV YMCYE--FVM SGWGTGYSFR bmy_11405T0/1-252 LGPKLMENRK PFELKKAMIT YNFFI----- -------FVM SGWGTGYSFR BACU018317/1-262 LGPKLMENRK PFELKKAMIT YNFFIVLFSV YMCYEASFVM SGWGTGYSFR 101 150 ENSBTAP00000010129/1-260 CDIVDYSQSP TALRMVRTCW LYYFSKFIEL LDTIFFILRK KNSQVTFLHV ENSP00000424123/1-281 CDIVDYSRSP TALRMARTCW LYYFSKFIEL LDTIFFVLRK KNSQVTFLHV ENSTTRP00000000009/1-283 CEIVDYSRSP TALRMARTCW LYYFSKFIEL LDTIFFVLRK KNSQVTFLHV bmy_11405T0/1-252 CEIVDYSRSP TALR------ ---------- ---IFFVLRK KSSQVTFLHV BACU018317/1-262 CEIVDYSHSP TALRMARTCW LYYFSKFIEL LDTIFFVLRK KSSQVTFLHV 151 200 ENSBTAP00000010129/1-260 FHHTIMPWTW WFGVKFAAGG LGTFHAFLNT AVHVVMYSYY GLCALGPDYQ ENSP00000424123/1-281 FHHTIMPWTW WFGVKFAAGG LGTFHALLNT AVHVVMYSYY GLSALGPAYQ ENSTTRP00000000009/1-283 FHHTIMPWTW WFGVKFAAGG LGTFHAFLNT AVHVVMYSYY GLCALGPAYQ bmy_11405T0/1-252 FHHTIMPWTW WFGVKFAAGG LGTFHAFLNT AVHVVMYSYY GLCALGPAYQ BACU018317/1-262 FHHTIMPWTW WFGVKFAAGG LGTFHAFLNT AVHVVMYSYY GLCALGPAYQ 201 250 ENSBTAP00000010129/1-260 KYLWWKKYLT SLQLIQFVLI TIHISQFFFM EDCKYQFPVF QYIIMSYGCI ENSP00000424123/1-281 KYLWWKKYLT SLQLVQFVIV AIHISQFFFM EDCKYQFPVF ACIIMSYSFM ENSTTRP00000000009/1-283 KYLWWKKYLT SLQLVQFVIV TIHIGQFFFM EDCKYQFPVF LYIIMSYGCI bmy_11405T0/1-252 KYLWWKKYLT SLQLVQFVIV TIHIGQFFFM EDCKYQFPVF LYIIMSYGCI BACU018317/1-262 KYLWWKKYLT SLQLVQFVIV TIHIGQFFFM EDCKYQFPVF LYIIMSYGCI 251 300 ENSBTAP00000010129/1-260 FLLLFLHFWY RAYTKGQRLP KTVKHGICKN KDH-- ENSP00000424123/1-281 FLLLFLHFWY RAYTKGQRLP KTVKNGTCKN KDN-- ENSTTRP00000000009/1-283 FLLLFLHFWY RAYTKGQRLP KTVKNGICKN KDHNS bmy_11405T0/1-252 FLLLFLHFWY RAYTKGQRLP KTVKNGVCKN KDH-- BACU018317/1-262 FLLLFLHFWY RAYTKGQRLP KTVKNGVCKN KDH--