KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:40:15 2014 Check: 00 .. Name: ENSP00000376141/1-791 Len: 801 Check: 9715 Weight: 1.00 Name: ENSBTAP00000010151/1-799 Len: 801 Check: 2033 Weight: 1.00 Name: ENSTTRP00000000225/1-792 Len: 801 Check: 9308 Weight: 1.00 Name: bmy_12558T0/1-520 Len: 801 Check: 5120 Weight: 1.00 Name: BACU003739/1-520 Len: 801 Check: 3392 Weight: 1.00 // 1 50 ENSP00000376141/1-791 -MADDKVAIL TDDEEEQKRK YVLADPFNGI SREPEPPSNE TPSSTETSAI ENSBTAP00000010151/1-799 MATDDKVAIL TDDEEEQKRK YVLADPFNGI SREPEPPSNE TPSPSETAAI ENSTTRP00000000225/1-792 MATDDKVAIL TDDEEEQKRK YVLADPFNGI SREPEPPSNE TPSPSETAAI bmy_12558T0/1-520 MATDDKVAIL TDDEEEQKRK YVLADPFNGI SREPEPPSNE TPSPSETAAI BACU003739/1-520 MATDDKVAIL TDDEEEQKRK YVLADPFNGI SREPEPPSNE TPSPSETAAI 51 100 ENSP00000376141/1-791 PEEEIDWIEK HCVKINNDLL ISKVFYFFFY SAYGSLYPLL PVYYKQLGMS ENSBTAP00000010151/1-799 PEEEIDWIEK HCVKINNDLL ISKVFYFFFY SAYGSLYPLL PVYYKQLGMS ENSTTRP00000000225/1-792 PEEEIDWIEK HCVKINNDLL ISKVFYFFFY SAYGSLYPLL PVYYKQLGMS bmy_12558T0/1-520 PEEEIDWIEK HCVKINNDLL ISKVFYFFFY SAYGSLYPLL PVYYKQLGMS BACU003739/1-520 PEEEIDWIEK HCVKINNDLL ISKVFYFFFY SAYGSLYPLL PVYYKQLGMS 101 150 ENSP00000376141/1-791 PSQSGLLVGI RYFIEFCSAP FWGVVADRFK KGKIVLLFSL LCWVLFNLGI ENSBTAP00000010151/1-799 PSQSGLLVGI RYFIEFCSAP FWGVVADRFK KGKIVLLFSL LCWVLFNLGI ENSTTRP00000000225/1-792 PSQSGLLVGI RYFIEFCSAP FWGVVADRFK KGKIVLLFSL LCWVLFNLGI bmy_12558T0/1-520 PSQSGLLVGI RYFIEFCSAP FWGVVADRFK KGKIVLLFSL LCWVLFNLGI BACU003739/1-520 PSQSGLLVGI RYFIEFCSAP FWGVVADRFK KGKIVLLFSL LCWVLFNLGI 151 200 ENSP00000376141/1-791 GFVKPATLRC VPKIRPTTHP TNASHQLTIL PTNSSFTSFL TISPKMREKR ENSBTAP00000010151/1-799 GFVKPATLRC VPKIPPTVHP TNSSHPFTIL PTNSSIVSFI TTSPRIRDKR ENSTTRP00000000225/1-792 GFVKPATLRC VPKIPPTAHP TSSSHLFTLL PANSSIVFSI TASPGIREKR bmy_12558T0/1-520 GFVKPATLRC VPKIPPRAHP TSSSHLFTLL PTNSSTVSSI TTSPGIREKR BACU003739/1-520 GFVKPATLRC VPKIPPRAHP TSSSHLFTLL PTNSSTVSSI TTSPGIREKR 201 250 ENSP00000376141/1-791 NL-------- LETRLNVSDT VTLPTAPNMN SEPTLQPQTG EITNRMMDLT ENSBTAP00000010151/1-799 HLLPYGGPVM SEVGPNVTET VIFSTAPNKT SAPTLQTQTD EIIDHI--VT ENSTTRP00000000225/1-792 NL-------- LEAGHSVTET VIFSTAPNKT SAPTLQPHTD EITDHVMNLT bmy_12558T0/1-520 NLPPYNGSEM LEAGHSVTGT VIFSTAPNKT SAPTLQPQTD EITDHVMNLT BACU003739/1-520 NLPPYNGSEM LEAGHSVMET VIFSTAPNKT SVPTLQPQTD EITDHVMNLT 251 300 ENSP00000376141/1-791 LNSSTAT-PV SPGSVTKETT TVIVTTTKSL PSDQVMLVYD QQEVEAIFLV ENSBTAP00000010151/1-799 LNSSTATSST PPGNAARETT TSMVTTTKSV PSDRVTLVYD QQEVEAIFLV ENSTTRP00000000225/1-792 MNPSTAT-SA PPGNATWETT TSIVTTTKSL PSDQVTLVYD QQEVEAIFLV bmy_12558T0/1-520 MNPSTAT-SA PPGNATWETT TSIVTTTKSL PSDQVTLVYD QQEVEAIFLV BACU003739/1-520 MNPSTAT-SA PPGNATWETT TSIVTTTKSL PSDQVTLVYD QQEVEAIFLV 301 350 ENSP00000376141/1-791 ILVVVIIGEF FSASSVTIVD TVTLQYLGKH RDRYGLQRMW GSLGWGLAML ENSBTAP00000010151/1-799 VLVVVVIGEF FSASSVTIVD TVTLQYLGKH RDRYGLQRMW GSLGWGLAML ENSTTRP00000000225/1-792 ILVVVIIGEF FSASSVTIVD TVTLQYLGKH RDRYGLQRMW GSLGWGLAML bmy_12558T0/1-520 ILVVVIIGEF FSASSVTIVD TVTLQYLGKH RDRYGLQRMW GSLGWGLAML BACU003739/1-520 ILVVVIIGEF FSASSVTIVD TVTLQYLGKH RDRYGLQRMW GSLGWGLAML 351 400 ENSP00000376141/1-791 SVGIGIDYTH IEVLIDGKGC KPPEYRNYQI VFIVFGVLMT MALIVATQFR ENSBTAP00000010151/1-799 SVGIGIDYTH VDVLIEGKGC KPPEYRNYQI VFFVFGVLMT MALIVATQFR ENSTTRP00000000225/1-792 SVGIGIDYTH VDVLINGKGC KPPEYRNYQI VFIVFGVLMT MALIVATQFR bmy_12558T0/1-520 SVGIGIDYTH VGVLINGKGC KPPEYRNYQI VFIVFGVLMT MALIVATQFR BACU003739/1-520 SVGIGIDYTH VGVLINGKGC KPPEYRNYQI VFIVFGVLMT MALIVATQFR 401 450 ENSP00000376141/1-791 FRYNHFKNDD SKGKEVEIPQ VERNNSTESS EETPTTTSHS QAFNFWDLIK ENSBTAP00000010151/1-799 FRYSHFKNSE SKGKEVEIPQ VERNSSMESS EETPTATSHS QAFSFWDLIR ENSTTRP00000000225/1-792 FRYSHFKNSE NKGKEVEIPQ VERNSSTESS EETPTTASHV QAFNFWDLIR bmy_12558T0/1-520 FRYNHFKNSE NKGKEVEIPQ VERNSSTESS EETPTTTSHS QAFNFWDLIR BACU003739/1-520 FRYNHFKNSE NKGKEVEIPQ VERNSSTESS EETPTAASHS QAFNFWDLIR 451 500 ENSP00000376141/1-791 LLCSVQYGSV LFVAWFMGFG YGFVFTFLYW HLEDLNGTTT LFGVCSVLSH ENSBTAP00000010151/1-799 LLCSVQYGSV LFVAWFMGFG YGFVFTFLYW HLEDLNGTTT LFGVCSVLSH ENSTTRP00000000225/1-792 LLCSVQYGSV LFVAWFMGFG YGFVFTFLYW HLEDLNGTTT LFGVCSVLSH bmy_12558T0/1-520 LLCSVQYGSV LFVAWFMGFG YGFVFTFLYW HLEDLNGTTT LFGVCSVLSH BACU003739/1-520 LLCSVQYGSV LFVAWFMGFG YGFVFTFLYW HLEDLNGTTT LFGVCSVLSH 501 550 ENSP00000376141/1-791 VSELTAYFFS HKLIELIGHI RVLYIGLACN TARYIYISYL ENAWTVLPME ENSBTAP00000010151/1-799 VSELTAYFFS HKLIELIGHI RVLYIGLACN TARYIYISYL ENAWTVLPME ENSTTRP00000000225/1-792 VSELTAYFFS HKLIELIGHI RVLYIGLACN TARYIYISYL ENAWTVLPME bmy_12558T0/1-520 VSELTAYFFS HKLIELIGHI R--------- ---------- ---------- BACU003739/1-520 VSELTAYFFS HKLIELIGHI R--------- ---------- ---------- 551 600 ENSP00000376141/1-791 VLQGVTHAAI WAACISYLSA AVPPELRTSA QGILQGLHLG LGRGCGAMIG ENSBTAP00000010151/1-799 VLQGVTHAAI WAACISYLSA AVPPELRTSA QGILQGLHLG LGRGCGAMIG ENSTTRP00000000225/1-792 VLQGVTHAAI WAACISYLSA AVPPELRTSA QGILQGLHLG LGRGCGAMIG bmy_12558T0/1-520 ---------- ---------- ---------- ---------- ---------- BACU003739/1-520 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000376141/1-791 GVLVNYFGAA ATFRGIGMAC LVILLLFALI QWLAVPDEEE DKTMLAERIP ENSBTAP00000010151/1-799 GVLVNFFGAA ATFRGIGMAC LVILLLFALI QWLAVPDEEE DKTMLAERIP ENSTTRP00000000225/1-792 GVLVNYFGAA ATFRGIGMAC LVILLFFALI QWLAVPDEEE DKTMLAERIP bmy_12558T0/1-520 ---------- ---------- ---------- ---------- ---------- BACU003739/1-520 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000376141/1-791 VPSSPVPIAT IDLVQQQTED VMPRIEPRLP PKKTKHQEEQ EDVNKPAWGV ENSBTAP00000010151/1-799 VPSSPVPIAT IDLVQQQTED VMPRTEPRLP PKKTKHQEEQ EDVNKPAWGV ENSTTRP00000000225/1-792 VPSSPVPIAT IDLVQQQTED VLPRVEPRLP PKKTKHQEEQ EDVNKPAWGV bmy_12558T0/1-520 ---------- ---------- ---------- ---------- ---------- BACU003739/1-520 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000376141/1-791 SSSPWVTFVY ALYQIKEMMQ LTRDNRASEI QPLQGTNENR ENSPAGRAQP ENSBTAP00000010151/1-799 SSSPWVTFAY ALYQIKELMQ LTRDSRASEI QPLQGTSENQ KTSAAGGAQL ENSTTRP00000000225/1-792 SSSPWVTFVY ALYQIKEMMQ LTRDNRASEI QPLQGTSEDR ETSPTGGARP bmy_12558T0/1-520 ---------- ---------- ---------- ---------- ---------- BACU003739/1-520 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000376141/1-791 VPCETHSDPS RNQPSPDAAA SQTQTSPAHP SVDPCTEESE EQQAQLAAGG ENSBTAP00000010151/1-799 GPCEAPPDPP RSQPSPPAAA SQTQSSPAHP SVDPRAEDSE DHQAPPAAGG ENSTTRP00000000225/1-792 GPREAPSDPS RSQPSPQAAA SQTQSSPTHP SVDPRREETE DQQVQPASGG bmy_12558T0/1-520 ---------- ---------- ---------- ---------- ---------- BACU003739/1-520 ---------- ---------- ---------- ---------- ---------- 801 850 ENSP00000376141/1-791 H ENSBTAP00000010151/1-799 H ENSTTRP00000000225/1-792 H bmy_12558T0/1-520 - BACU003739/1-520 -