KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:40:16 2014 Check: 00 .. Name: ENSP00000244051/1-460 Len: 460 Check: 2606 Weight: 1.00 Name: ENSBTAP00000010154/1-395 Len: 460 Check: 2283 Weight: 1.00 Name: ENSTTRP00000008573/1-455 Len: 460 Check: 2915 Weight: 1.00 Name: bmy_02947T0/1-455 Len: 460 Check: 2794 Weight: 1.00 Name: BACU011325/1-455 Len: 460 Check: 2048 Weight: 1.00 // 1 50 ENSP00000244051/1-460 MASREEVLAL QAEVAQREEE LNSLKQKLAS ALLAEQEPQP ERLVPVSPLP ENSBTAP00000010154/1-395 MAAREEVLAL QAEVAQREEE LSSLKQRLAA ALSTGQE--S ARSVPVSPLP ENSTTRP00000008573/1-455 MAATEEVLTL QAEVAQREEE LSSLKRRLAA ALLAEQE--S ERLVPVSPLP bmy_02947T0/1-455 MAAREEVLTL QAQVAQREEE LSSLKQRLAA ALLAEQK--S ERLVPVSPLP BACU011325/1-455 MAAREEVLTL QAEVAQREEE LSSLKQRLAA ALLAEQE--S ERLVPVSPLP 51 100 ENSP00000244051/1-460 PKAALSRDEI LRYSRQLVLP ELGVHGQLRL GTACVLIVGC GGLGCPLAQY ENSBTAP00000010154/1-395 PRAALSREEI RRYSRQLVLP ELGMQGQLRL AAAAVLVVGC GGLGCPLAQY ENSTTRP00000008573/1-455 PKAALSRDEI LRYSRQLVLP ELGVQGQLRL ATASVLVVGC GGLGCPLAQY bmy_02947T0/1-455 PKAALSRDEI LRYSRQLVLP ELGVQGQLRL ATASVLVVGC GGLGCPLAQY BACU011325/1-455 PKAALSRDEI LRYSRQLVLP ELGVQGQLRL ATASVLVVGC GGLGCPLAQY 101 150 ENSP00000244051/1-460 LAAAGVGRLG LVDYDVVEMS NLARQVLHGE ALAGQAKAFS AAASLRRLNS ENSBTAP00000010154/1-395 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008573/1-455 LAAAGVGRLG LVDYDVVEVS NLARQVLHGE ALAGQAKVFS AAATLRRLNS bmy_02947T0/1-455 LAAAGVGRLG LVDYDVVEVS NLARQVLHGE ALAGQAKVFS AAATLRRLNS BACU011325/1-455 LAAAGVGRLG LVDYDVVEVS NLARQVLHGE ALAGQAKVFS AAATLRRLNS 151 200 ENSP00000244051/1-460 AVECVPYTQA LTPATALDLV RRYDVVADCS DNVPTRYLVN DACVLAGRPL ENSBTAP00000010154/1-395 ---------- LTPATALDLV RRYDVVADCS DNAPTRYLVS DACVLAGRPL ENSTTRP00000008573/1-455 AVECVPYAQA LTPPTALDLV GRYDVVADCS DNVPTRYLVN DACVLTGRPL bmy_02947T0/1-455 AVECVPYAQA LTPATALDLV RRYDVVADCS DNVPTRYLVN DACVLTGRPL BACU011325/1-455 AVECVPYAQA LTPATALDLV RRYDVVADCS DNVPTRYLVN DACVLTGRPL 201 250 ENSP00000244051/1-460 VSASALRFEG QITVYHYDGG PCYRCIFPQP PPAETVTNCA DGGVLGVVTG ENSBTAP00000010154/1-395 VSASALRFEG QLTVYHYGGG PCYRCVFPRP PPAETVTSCA DGGVLGAVTG ENSTTRP00000008573/1-455 VSASALRFEG QLTVYHYGGG PCYRCVFPQP PPAETVTSCA DGGVLGVVTG bmy_02947T0/1-455 VSASALRFEG QLTVYHYGGG PCYRCVFPQP PPAETVTSCA DGGVLGVVTG BACU011325/1-455 VSASALRFEG QLTVYHYGGG PCYRCVFPQP PPAETVTSCA DGGVLGVVTG 251 300 ENSP00000244051/1-460 VLGCLQALEV LKIAAGLGPS YSGSLLLFDA LRGHFRSIRL RSRRLDCAAC ENSBTAP00000010154/1-395 VLGCLQALEV LKTAAGLGPS YSGRLLLFDA LRGDFRCIRL RRRRPDCAAC ENSTTRP00000008573/1-455 VLGCLQALEV LKIAAGLGPS YSGSLLLFDA LGGHFRCIRL RRRRPDCAAC bmy_02947T0/1-455 VLGCLQALEV LKIAAGLGPS YSGSLLLFDA LGGHFRCIRL RRRRPDCAAC BACU011325/1-455 VLGCLQALEV LKIAAGLGPS YSGSLLLFDA LGGHFRCIRL RRRRPDCAAC 301 350 ENSP00000244051/1-460 GERPTVTDLL DYEAFCGSSA TDKCRSLQLL SPEERVSVTD YKRLLDSGAF ENSBTAP00000010154/1-395 GERPTVTDLQ DYESFCGSSA TDKCRSLRLL SPEERISIMD YKRLLDSRSP ENSTTRP00000008573/1-455 GERPTVTDLQ DYESFCGSSA TDKCRSLQLL KPEERISVVD YKRLLDSGSP bmy_02947T0/1-455 GERPTVTDLQ DYESFCGSSA TDKCRSLQLL SPEERISVVD YKRLLDSGSP BACU011325/1-455 GERPTVADLQ DYESFCGSLA TDKCRSLQLL SPEERISVVD YKRLLDSGSP 351 400 ENSP00000244051/1-460 HLLLDVRPQV EVDICRLPHA LHIPLKHLER RDAESLKLLK EAIWEEKQGT ENSBTAP00000010154/1-395 HLLLDVRPQV EVDICRLPHA LHIPLKSLER RDAESLKVLG EAIREGKQGA ENSTTRP00000008573/1-455 HVLLDVRPPV EVDLCRLPHS LHIPLKHLER RNAESLKLLG EAIREGKQGT bmy_02947T0/1-455 HLLLDVRPPV EVDLCRLPHA LHIPLKHLER RNAESLKLLG EAIREGKQGT BACU011325/1-455 HLLLDVRPPV EVDLCRLPHA LHIPLKHLER RNAESLKLLR EAIREGKQGT 401 450 ENSP00000244051/1-460 QEGAAVPIYV ICKLGNDSQK AVKILQSLSA AQELDPLTVR DVVGGLMAWA ENSBTAP00000010154/1-395 QEGASVPIYV ICKLGNDSQK AVKILQSWA- --DLDSLTVK DVVGGLMAWA ENSTTRP00000008573/1-455 QEGVSLPIYV ICKLGNDSQK AVKILQSWT- --DLDSLTVR DVVGGLMAWA bmy_02947T0/1-455 QEGASLPIYV ICKLGNDSQK AVKILQSWT- --DLDSLTVQ DVVGGLMAWA BACU011325/1-455 QEGASLPIYV ICKLGNDSQK AVKILQSWT- --DLDSLTVR DVVGGLMAWA 451 500 ENSP00000244051/1-460 AKIDGTFPQY ENSBTAP00000010154/1-395 AKIDGTFPQY ENSTTRP00000008573/1-455 AKIDGTFPRY bmy_02947T0/1-455 AKIDGTFPQY BACU011325/1-455 AKIDATFPQY