KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:40:24 2014 Check: 00 .. Name: bmy_02196T0/1-473 Len: 794 Check: 2172 Weight: 1.00 Name: ENSBTAP00000010204/1-721 Len: 794 Check: 7924 Weight: 1.00 Name: ENSP00000438284/1-789 Len: 794 Check: 8316 Weight: 1.00 Name: BACU019788/1-764 Len: 794 Check: 3199 Weight: 1.00 Name: ENSTTRP00000010518/1-783 Len: 794 Check: 9741 Weight: 1.00 // 1 50 bmy_02196T0/1-473 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010204/1-721 ---------- ---------- ---------- ---------- ---------- ENSP00000438284/1-789 MEDGPSNNAS CFRRLTECFL SPSLTDEKVK AYLSLHPQVL DEFVSESVSA BACU019788/1-764 ---------- ---------- ---LTDEKVK AYLSLHPQVL DEFVSESVSA ENSTTRP00000010518/1-783 -------NAS CFRRLTECFL SPSLTDEKVK AYLSLHPQVL DEFVSESVSA 51 100 bmy_02196T0/1-473 ---------- ---------- -------MEV MDGAVAQLNH ---------- ENSBTAP00000010204/1-721 ---------- ---------- ---SKYQDTN MQGVVYELNS YIEQRLDTGG ENSP00000438284/1-789 ETVEKWLKRK NNKSEDESAP KEVSRYQDTN MQGVVYELNS YIEQRLDTGG BACU019788/1-764 ETVEKWLKRK NNKPEDESSP KEVSRYQDTN MQGVVYELNS YIEQRLDTGG ENSTTRP00000010518/1-783 ETVEKWLKRK NNKPEDESSP KEVSRYQDTN MQGVVYELNS YIEQRLDTGG 101 150 bmy_02196T0/1-473 NDDLL----- ---------- --------KA DRSLCVFTPP GIKEGKPRLI ENSBTAP00000010204/1-721 DNQLLLYELS SIIKIATKAD GFALYFLGEC NNSLCVFIPP GIKEGKPKLI ENSP00000438284/1-789 DNQLLLYELS SIIKIATKAD GFALYFLGEC NNSLCIFTPP GIKEGKPRLI BACU019788/1-764 DNQLLLYELS SIIKIATKAD GFALYFLGEC NNSLCVFTPP GIKEGKPRLI ENSTTRP00000010518/1-783 DNQLLLYELS SIIKIATKAD GFALYFLGEC NNSLCVFTPP GIKEGKPRLI 151 200 bmy_02196T0/1-473 PAGPIAQGTT TSAYVAKSRK TLLVEDILGD ERFPRGTGLE SGTRIQSVLC ENSBTAP00000010204/1-721 PAGPIAQGTT TSAYVAKSRK TLLVEDILGD ERFPRGTGLE SGTRIQSVLC ENSP00000438284/1-789 PAGPITQGTT VSAYVAKSRK TLLVEDILGD ERFPRGTGLE SGTRIQSVLC BACU019788/1-764 PAGPIAQGTT TSAYVAKSRK TLLVEDILGD ERFPRGTGLE SGTRIQSVLC ENSTTRP00000010518/1-783 PAGPIAQGTT TSAYVAKSRK TLLVEDILGD ERFPRGTGLE SGTRIQSVLC 201 250 bmy_02196T0/1-473 LPIVTAIGDL IGILELYRHW GKEAFCLSHQ EVATANLAWA SVAIHQVQVC ENSBTAP00000010204/1-721 LPIVTAIGDL IGILELYRHW GKEAFRLSHQ EVATANLAWA SVAIHQVQVC ENSP00000438284/1-789 LPIVTAIGDL IGILELYRHW GKEAFCLSHQ EVATANLAWA SVAIHQVQVC BACU019788/1-764 LPIVTAIGDL IGILELYRHW GKEAFCLSHQ EVATANLAWA SVAIHQVQVC ENSTTRP00000010518/1-783 LPIVTAIGDL IGILELYRHW GKEAFCLSHQ EVATANLAWA SVAIHQVQVC 251 300 bmy_02196T0/1-473 RGLAKQTELN DFLLDVSKTY FDNIVAIDSL LEHIMIYAKN LVNADRCALF ENSBTAP00000010204/1-721 RGLAKQTELN DFLLDVSKTY FDNIVAIDSL LEHIMIYAKN LVNADRCALF ENSP00000438284/1-789 RGLAKQTELN DFLLDVSKTY FDNIVAIDSL LEHIMIYAKN LVNADRCALF BACU019788/1-764 RGLAKQTELN DFLLDVSKTY FDNIVAIDSL LEHIMIYAKN LVNADRCALF ENSTTRP00000010518/1-783 TGLAKQTELN DFLLDVSKTY FDNIVAIDSL LEHIMIYAKN LVNADRCALF 301 350 bmy_02196T0/1-473 QVDHKNKELY SDLFDIGEEK EGKPVFKKTK EIRFSIEKGI AGQVARTGEV ENSBTAP00000010204/1-721 QVDHKNKELY SDLFDIGEEK EGKPVFKKTK EIRFSIEKGI AGQVARTGEV ENSP00000438284/1-789 QVDHKNKELY SDLFDIGEEK EGKPVFKKTK EIRFSIEKGI AGQVARTGEV BACU019788/1-764 QVDHKNKELY SDLFDIGEEK EGKPVFKKTK EIRFSIEKGI AGQVARTGEV ENSTTRP00000010518/1-783 QVDHKSKELY SDLFDIGEEK EGKPVFKKTK EIRFSIEKGI AGQVARTGEV 351 400 bmy_02196T0/1-473 LNIPDAYADP RFNREVDLYT GYTTRNILCM PIVSRGSVIG VVQMVNKISG ENSBTAP00000010204/1-721 LNIPDAYADP RFNREVDLYT GYTTRNILCM PIVSRGSVIG VVQMVNKLSG ENSP00000438284/1-789 LNIPDAYADP RFNREVDLYT GYTTRNILCM PIVSRGSVIG VVQMVNKISG BACU019788/1-764 LNIPDAYADP RFNREVDLYT GYTTRNILCM PIVSRGSVIG VVQMVNKISG ENSTTRP00000010518/1-783 LNIPDAYADP RFNREVDLYT GYTTRNILCM PIVSRGSVIG VVQMVNKISG 401 450 bmy_02196T0/1-473 SAFSKTDENN FKINPKQRFL ------MYHR IRHSECIYRV TMEKLSYHSI ENSBTAP00000010204/1-721 SAFSKTDENN FKMFAVFCAL ALHCANMYHR IRHSECIYRV TMEKLSYHSI ENSP00000438284/1-789 SAFSKTDENN FKMFAVFCAL ALHCANMYHR IRHSECIYRV TMEKLSYHSI BACU019788/1-764 SAFSKTDENN FKMFAVFCAL ALHCANMYHR IRHSECIYRV TMEKLSYHSI ENSTTRP00000010518/1-783 SAFSKTDENN FKMFAVFCAL ALHCANMYHR IRHSECIYRV TMEKLSYHSI 451 500 bmy_02196T0/1-473 CTAEEWQGLM HFNLPARLCK EIELFHFDIG PFENMWPGIF VYMVHR---- ENSBTAP00000010204/1-721 CTAEEWQGLM HFNLPGRLCK EIELFHFDVG PFENMWPGIF VYMIHRSCGT ENSP00000438284/1-789 CTSEEWQGLM QFTLPVRLCK EIELFHFDIG PFENMWPGIF VYMVHRSCGT BACU019788/1-764 CTAEEWQGLM RFNLPARLCK EIELFHFDIG PFENMWPGIF VYMVHRSCGT ENSTTRP00000010518/1-783 CTSEEWQGLM HFNLPARLCK EIELFHFDIG PFENMWPGIF VYMVHQSCGT 501 550 bmy_02196T0/1-473 --FELEKLCR FIMSVKKNYR RVPYHNWKHA VTVAHCMYAI LQNNHGLFTE ENSBTAP00000010204/1-721 ACFELEKLCR FIMSVKKNYR RVPYHNWKHA VTVAHCMYAI LQNSRGLFTD ENSP00000438284/1-789 SCFELEKLCR FIMSVKKNYR RVPYHNWKHA VTVAHCMYAI LQNNHTLFTD BACU019788/1-764 ACFELEKLCR FIMSVKKNYR RVPYHNWKHA VTVAHCMYAI LQNNHGLFTE ENSTTRP00000010518/1-783 ACFELEKLCR FIMSVKKNYR RVPYHNWKHA VTVAHCMYAI LQNNHGLFTE 551 600 bmy_02196T0/1-473 LEHKGTGVRR CSTD------ ---------- ---------- ---------- ENSBTAP00000010204/1-721 LERKGLLIAC LCHDLDHRGF SNSYLQKFDH PLAALYSTST MEQHHFSQTV ENSP00000438284/1-789 LERKGLLIAC LCHDLDHRGF SNSYLQKFDH PLAALYSTST MEQHHFSQTV BACU019788/1-764 LERKGLLIAC LCHDLDHRGF SNTYLQKFDH PLAALYSTST MEQHHFSQTV ENSTTRP00000010518/1-783 LERKGLLIAC LCHDLDHRGF SNSYLQKFDH PLAALYSTST MEQHHFSQTV 601 650 bmy_02196T0/1-473 ---------- ---------- ---------- -SPDL----- ---------- ENSBTAP00000010204/1-721 SILQLEGHNI FSTLSSSEYE QVLEIIRKAI IATDLALYFG NRKQLEEMYQ ENSP00000438284/1-789 SILQLEGHNI FSTLSSSEYE QVLEIIRKAI IATDLALYFG NRKQLEEMYQ BACU019788/1-764 SILQLEGHNI FSTLSSSEYE QVLEIIRKAI IATDLALYFG NRKQLEEMYQ ENSTTRP00000010518/1-783 SILQLEGHNI FSTLSSSEYE QVLEIIRKAI IATDLALYFG NRKQLEEMYQ 651 700 bmy_02196T0/1-473 ---MDLGLVT HSEKIWGHLV HSCT------ ---------- ---------- ENSBTAP00000010204/1-721 TGSLNLNNQS HRDRVIGLMM TACDLCSVTK LWPVTRLTAN DIYAEFWAEG ENSP00000438284/1-789 TGSLNLNNQS HRDRVIGLMM TACDLCSVTK LWPVTKLTAN DIYAEFWAEG BACU019788/1-764 TGSLNLNNQS HRDRVIGLMM TACDLCSVTK LWPVTKLTAN DIYAEFWAEG ENSTTRP00000010518/1-783 TGSLNLNNQS HRDRVIGLMM TACDLCSVTK LWPVTKLTAN DIYAEFWAEG 701 750 bmy_02196T0/1-473 ------AVEP LP-------- ---------- ---------- ---------- ENSBTAP00000010204/1-721 DEMKKLGIQP IPMMDRDKKD EVPQGQLGFY NAVAIPCYTT LTQIFPATEP ENSP00000438284/1-789 DEMKKLGIQP IPMMDRDKKD EVPQGQLGFY NAVAIPCYTT LTQILPPTEP BACU019788/1-764 DEMKKLGIQP IPMMDRDKKD EVPQGQLGFY NAVAIPCYTT LTQIFPPTEP ENSTTRP00000010518/1-783 DEMKKLGIQP IPMMDRDKKD EVPQGQLGFY NAVAIPCYAT LTQILPPTEP 751 800 bmy_02196T0/1-473 ---------- ---------- ---------- ---------- ---- ENSBTAP00000010204/1-721 LLKACRNNLS QWEKVIRGEE SALGIPDLPE AEGSPERLPV KTDD ENSP00000438284/1-789 LLKACRDNLS QWEKVIRGEE TATWISSPSV AQKAAAS--- -ED- BACU019788/1-764 LLKACRNNLS QWEKVIRGEE SAVWISNPPA AQGTSEK--- ---- ENSTTRP00000010518/1-783 LLKACRNNLS QWEKVIRGEE SAVWISNPPA AQGTAAR--- -EDR