KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:40:24 2014 Check: 00 ..
Name: bmy_01565T0/1-412 Len: 535 Check: 6911 Weight: 1.00
Name: ENSP00000234256/1-532 Len: 535 Check: 1848 Weight: 1.00
Name: ENSBTAP00000010206/1-530 Len: 535 Check: 2493 Weight: 1.00
Name: BACU019427/1-531 Len: 535 Check: 3099 Weight: 1.00
Name: ENSTTRP00000007826/1-530 Len: 535 Check: 1285 Weight: 1.00
//
1 50
bmy_01565T0/1-412 ---------- ---------M LPGS-GDSLG KHFKIASVKE TSRMPILCDS
ENSP00000234256/1-532 MEKSNETNGY LDSAQAGPAA GPGAPGTAAG RARRCAGFLR RQALVLLTVS
ENSBTAP00000010206/1-530 MEKSSETNGY LDSAQEGPAA GPGEPGTTAR RAGRCAGFLR RHGLVLLTVS
BACU019427/1-531 MEKSRETNGY LDSAQAGPAA GPGAPGSTAR RARRCAGFLR RHALVLLTVS
ENSTTRP00000007826/1-530 MEKSSETNGY LDSAQAGPAA GPGARGSTAG RARRCAGFLR RHALVLLTVS
51 100
bmy_01565T0/1-412 RHVPWQRQGA VLSACGQEI- QNAVAKWFDF PTQCIRNSV- ----------
ENSP00000234256/1-532 GVLAGAGLGA ALR--GLSL- SRTQVTYLAF PGEMLLRMLR MIILPLVVCS
ENSBTAP00000010206/1-530 GVVAGAGLGA ALR--GLQL- NRTQVTYLAF PGEMLLRMLR MIILPLVVCS
BACU019427/1-531 GVVAGAGLGA ALR--GLKLM NRTQVTYLAF PGEMLLRMLR MIILPLVVCS
ENSTTRP00000007826/1-530 GVVAGAGLGA ALR--GLKL- NRTQVIYLAF PGEMLLRMLR MIILPLVVCS
101 150
bmy_01565T0/1-412 ---------- ---------- ---------- ---------- ----------
ENSP00000234256/1-532 LVSGAASLDA SCLGRLGGIA VAYFGLTTLS ASALAVALAF IIKPGSGAQT
ENSBTAP00000010206/1-530 LVSGAASLDA SSLGRLGGIA IAYFGLTTLG ASALAVALAF IIKPGSGSQT
BACU019427/1-531 LVSGAASLDA SSLGRLGGIA IAYFGLTTLG ASALAVALAF IIKPGSGAQT
ENSTTRP00000007826/1-530 LVSGAASLDA SSLGRLGGIA IAYFGLTTLG ASALAVALAF IIKPGSGAQT
151 200
bmy_01565T0/1-412 ---ADWGME- ---------- --VYIE-CRI LFR------- -RVF------
ENSP00000234256/1-532 LQSSDLGLED SGPPPVPKET VDSFLDLARN LFPSNLVVAA FRTYATDYKV
ENSBTAP00000010206/1-530 LQSSDLGLED SGPPPVPKET VDSFLDLTRN LFPSNLVVAA FRTYATDYRE
BACU019427/1-531 LQSSDLGLEE TGPPPVPKET VDSFLDLARN LFPSNLVVAA FRTYATDYRE
ENSTTRP00000007826/1-530 LQSSDLGLEE TGPPPVPKET VDSFLDLARN LFPSNLVVAA FRTYATDYRE
201 250
bmy_01565T0/1-412 --------EI FINSIPIGTE IEGMNILGLV LFALVLGVAL KKLGSEGEEL
ENSP00000234256/1-532 VTQNSSSGNV THEKIPIGTE IEGMNILGLV LFALVLGVAL KKLGSEGEDL
ENSBTAP00000010206/1-530 VTYNTSAGKV TIEKIPIGTE IEGMNILGLV LFALVLGVAL KKLGSEGEEL
BACU019427/1-531 VTHNTSTGNI TREKIPIGTE IEGMNILGLV LFALVLGVAL KKLGSEGEEL
ENSTTRP00000007826/1-530 VTHNTSTGNI TREKIPIGTE IEGMNILGLV LFALVLGVAL KKLGSEGEEL
251 300
bmy_01565T0/1-412 IRFFNALNEA TMVLVSWIMW YVPVGIMFLV GSKIVEMKDI VVLVTSLGKY
ENSP00000234256/1-532 IRFFNSLNEA TMVLVSWIMW YVPVGIMFLV GSKIVEMKDI IVLVTSLGKY
ENSBTAP00000010206/1-530 IRFFNAFNEA TMVLVSWIMW YVPVGIMFLV GSKIVEMKDI IMLVTSLGKY
BACU019427/1-531 IRFFNALNEA TMVLVSWIMW YVPVGIMFLV GSKIVEMKDI IVLVTSLGKY
ENSTTRP00000007826/1-530 IRFFNALNEA TMVLVSWIMW YVPVGIMFLV GSKIVEMKDI IVLVTSLGKY
301 350
bmy_01565T0/1-412 IFTSILGHFI HGGIVLPLIY FVFTRKNPFR FLLGLLTPFA TAFATCSSSA
ENSP00000234256/1-532 IFASILGHVI HGGIVLPLIY FVFTRKNPFR FLLGLLAPFA TAFATCSSSA
ENSBTAP00000010206/1-530 IFTSILGHFI HGGIVLPLIY FVFTRKNPFR FLLGLLTPFA TAFATCSSSA
BACU019427/1-531 IFTSILGHFI HGGIVLPLIY FVFTRKNPFR FLLGLLTPFA TAFATCSSSA
ENSTTRP00000007826/1-530 IFTSILGHFI HGGIVLPLIY FVFTRKNPFR FLLGLLTPFA TAFATCSSSA
351 400
bmy_01565T0/1-412 TLPSMMKCIE ENNGVDKRIG RFILPIGATV NMDGAAIFQC VAAVFIAQLN
ENSP00000234256/1-532 TLPSMMKCIE ENNGVDKRIS RFILPIGATV NMDGAAIFQC VAAVFIAQLN
ENSBTAP00000010206/1-530 TLPSMMKCIE ENNGVDKRIS RFILPIGATV NMDGAAIFQC VAAVFIAQLN
BACU019427/1-531 TLPSMMKCIE ENNGVDKRIG RFILPIGATV NMDGAAIFQC VAAVFIAQLN
ENSTTRP00000007826/1-530 TLPSMIKCIE ENNGVDKRIG RFILPIGATV NMDGAAIFQC VAAVFIAQLN
401 450
bmy_01565T0/1-412 NVELKAGQIF TILVTATASS VGAAGVPAGG VLTIAIILEA IGLPTHDLSL
ENSP00000234256/1-532 NVELNAGQIF TILVTATASS VGAAGVPAGG VLTIAIILEA IGLPTHDLPL
ENSBTAP00000010206/1-530 NVELRAGQIF TILVTATASS VGAAGVPAGG VLTIAIILEA IGLPTHDLSL
BACU019427/1-531 NVELKAGQIF TILVTATASS VGAAGVPAGG VLTIAIILEA IGLPTHDLSL
ENSTTRP00000007826/1-530 NVELKAGQIF TILVTATASS VGAAGVPAGG VLTIAIILEA IGLPTHDLSL
451 500
bmy_01565T0/1-412 ILAVDWIVDR TTTVVNVEGD ALGAGILHHL NQKATKRGEQ ELREVKVEAV
ENSP00000234256/1-532 ILAVDWIVDR TTTVVNVEGD ALGAGILHHL NQKATKKGEQ ELAEVKVEAI
ENSBTAP00000010206/1-530 ILAVDWIVDR TTTVVNVEGD ALGAGILHHL NQKAMKRGEQ ELSEVKVEAI
BACU019427/1-531 ILAVDWIVDR TTTVVNVEGD ALGAGILHHL NQKATKRGEQ ELSEVKVEAV
ENSTTRP00000007826/1-530 ILAVDWIVDR TTTVVNVEGD ALGAGILHHL NQKATKRGEQ ELSEVKVEAV
501 550
bmy_01565T0/1-412 PNCKSEEETS PLVTHPNPTG LAASTP--ES KESVL
ENSP00000234256/1-532 PNCKSEEETS PLVTHQNPAG PVASAPELES KESVL
ENSBTAP00000010206/1-530 PNSKSEEETS PLVTHPNPTG PAASTP--ES KESVL
BACU019427/1-531 PNCKSEEETS PLVTHPNPTS LAASTP--ES KESVL
ENSTTRP00000007826/1-530 PNCKSEEETS PLVTHPNPTG LAASTP--ES KESVL