KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:40:24 2014 Check: 00 .. Name: bmy_01565T0/1-412 Len: 535 Check: 6911 Weight: 1.00 Name: ENSP00000234256/1-532 Len: 535 Check: 1848 Weight: 1.00 Name: ENSBTAP00000010206/1-530 Len: 535 Check: 2493 Weight: 1.00 Name: BACU019427/1-531 Len: 535 Check: 3099 Weight: 1.00 Name: ENSTTRP00000007826/1-530 Len: 535 Check: 1285 Weight: 1.00 // 1 50 bmy_01565T0/1-412 ---------- ---------M LPGS-GDSLG KHFKIASVKE TSRMPILCDS ENSP00000234256/1-532 MEKSNETNGY LDSAQAGPAA GPGAPGTAAG RARRCAGFLR RQALVLLTVS ENSBTAP00000010206/1-530 MEKSSETNGY LDSAQEGPAA GPGEPGTTAR RAGRCAGFLR RHGLVLLTVS BACU019427/1-531 MEKSRETNGY LDSAQAGPAA GPGAPGSTAR RARRCAGFLR RHALVLLTVS ENSTTRP00000007826/1-530 MEKSSETNGY LDSAQAGPAA GPGARGSTAG RARRCAGFLR RHALVLLTVS 51 100 bmy_01565T0/1-412 RHVPWQRQGA VLSACGQEI- QNAVAKWFDF PTQCIRNSV- ---------- ENSP00000234256/1-532 GVLAGAGLGA ALR--GLSL- SRTQVTYLAF PGEMLLRMLR MIILPLVVCS ENSBTAP00000010206/1-530 GVVAGAGLGA ALR--GLQL- NRTQVTYLAF PGEMLLRMLR MIILPLVVCS BACU019427/1-531 GVVAGAGLGA ALR--GLKLM NRTQVTYLAF PGEMLLRMLR MIILPLVVCS ENSTTRP00000007826/1-530 GVVAGAGLGA ALR--GLKL- NRTQVIYLAF PGEMLLRMLR MIILPLVVCS 101 150 bmy_01565T0/1-412 ---------- ---------- ---------- ---------- ---------- ENSP00000234256/1-532 LVSGAASLDA SCLGRLGGIA VAYFGLTTLS ASALAVALAF IIKPGSGAQT ENSBTAP00000010206/1-530 LVSGAASLDA SSLGRLGGIA IAYFGLTTLG ASALAVALAF IIKPGSGSQT BACU019427/1-531 LVSGAASLDA SSLGRLGGIA IAYFGLTTLG ASALAVALAF IIKPGSGAQT ENSTTRP00000007826/1-530 LVSGAASLDA SSLGRLGGIA IAYFGLTTLG ASALAVALAF IIKPGSGAQT 151 200 bmy_01565T0/1-412 ---ADWGME- ---------- --VYIE-CRI LFR------- -RVF------ ENSP00000234256/1-532 LQSSDLGLED SGPPPVPKET VDSFLDLARN LFPSNLVVAA FRTYATDYKV ENSBTAP00000010206/1-530 LQSSDLGLED SGPPPVPKET VDSFLDLTRN LFPSNLVVAA FRTYATDYRE BACU019427/1-531 LQSSDLGLEE TGPPPVPKET VDSFLDLARN LFPSNLVVAA FRTYATDYRE ENSTTRP00000007826/1-530 LQSSDLGLEE TGPPPVPKET VDSFLDLARN LFPSNLVVAA FRTYATDYRE 201 250 bmy_01565T0/1-412 --------EI FINSIPIGTE IEGMNILGLV LFALVLGVAL KKLGSEGEEL ENSP00000234256/1-532 VTQNSSSGNV THEKIPIGTE IEGMNILGLV LFALVLGVAL KKLGSEGEDL ENSBTAP00000010206/1-530 VTYNTSAGKV TIEKIPIGTE IEGMNILGLV LFALVLGVAL KKLGSEGEEL BACU019427/1-531 VTHNTSTGNI TREKIPIGTE IEGMNILGLV LFALVLGVAL KKLGSEGEEL ENSTTRP00000007826/1-530 VTHNTSTGNI TREKIPIGTE IEGMNILGLV LFALVLGVAL KKLGSEGEEL 251 300 bmy_01565T0/1-412 IRFFNALNEA TMVLVSWIMW YVPVGIMFLV GSKIVEMKDI VVLVTSLGKY ENSP00000234256/1-532 IRFFNSLNEA TMVLVSWIMW YVPVGIMFLV GSKIVEMKDI IVLVTSLGKY ENSBTAP00000010206/1-530 IRFFNAFNEA TMVLVSWIMW YVPVGIMFLV GSKIVEMKDI IMLVTSLGKY BACU019427/1-531 IRFFNALNEA TMVLVSWIMW YVPVGIMFLV GSKIVEMKDI IVLVTSLGKY ENSTTRP00000007826/1-530 IRFFNALNEA TMVLVSWIMW YVPVGIMFLV GSKIVEMKDI IVLVTSLGKY 301 350 bmy_01565T0/1-412 IFTSILGHFI HGGIVLPLIY FVFTRKNPFR FLLGLLTPFA TAFATCSSSA ENSP00000234256/1-532 IFASILGHVI HGGIVLPLIY FVFTRKNPFR FLLGLLAPFA TAFATCSSSA ENSBTAP00000010206/1-530 IFTSILGHFI HGGIVLPLIY FVFTRKNPFR FLLGLLTPFA TAFATCSSSA BACU019427/1-531 IFTSILGHFI HGGIVLPLIY FVFTRKNPFR FLLGLLTPFA TAFATCSSSA ENSTTRP00000007826/1-530 IFTSILGHFI HGGIVLPLIY FVFTRKNPFR FLLGLLTPFA TAFATCSSSA 351 400 bmy_01565T0/1-412 TLPSMMKCIE ENNGVDKRIG RFILPIGATV NMDGAAIFQC VAAVFIAQLN ENSP00000234256/1-532 TLPSMMKCIE ENNGVDKRIS RFILPIGATV NMDGAAIFQC VAAVFIAQLN ENSBTAP00000010206/1-530 TLPSMMKCIE ENNGVDKRIS RFILPIGATV NMDGAAIFQC VAAVFIAQLN BACU019427/1-531 TLPSMMKCIE ENNGVDKRIG RFILPIGATV NMDGAAIFQC VAAVFIAQLN ENSTTRP00000007826/1-530 TLPSMIKCIE ENNGVDKRIG RFILPIGATV NMDGAAIFQC VAAVFIAQLN 401 450 bmy_01565T0/1-412 NVELKAGQIF TILVTATASS VGAAGVPAGG VLTIAIILEA IGLPTHDLSL ENSP00000234256/1-532 NVELNAGQIF TILVTATASS VGAAGVPAGG VLTIAIILEA IGLPTHDLPL ENSBTAP00000010206/1-530 NVELRAGQIF TILVTATASS VGAAGVPAGG VLTIAIILEA IGLPTHDLSL BACU019427/1-531 NVELKAGQIF TILVTATASS VGAAGVPAGG VLTIAIILEA IGLPTHDLSL ENSTTRP00000007826/1-530 NVELKAGQIF TILVTATASS VGAAGVPAGG VLTIAIILEA IGLPTHDLSL 451 500 bmy_01565T0/1-412 ILAVDWIVDR TTTVVNVEGD ALGAGILHHL NQKATKRGEQ ELREVKVEAV ENSP00000234256/1-532 ILAVDWIVDR TTTVVNVEGD ALGAGILHHL NQKATKKGEQ ELAEVKVEAI ENSBTAP00000010206/1-530 ILAVDWIVDR TTTVVNVEGD ALGAGILHHL NQKAMKRGEQ ELSEVKVEAI BACU019427/1-531 ILAVDWIVDR TTTVVNVEGD ALGAGILHHL NQKATKRGEQ ELSEVKVEAV ENSTTRP00000007826/1-530 ILAVDWIVDR TTTVVNVEGD ALGAGILHHL NQKATKRGEQ ELSEVKVEAV 501 550 bmy_01565T0/1-412 PNCKSEEETS PLVTHPNPTG LAASTP--ES KESVL ENSP00000234256/1-532 PNCKSEEETS PLVTHQNPAG PVASAPELES KESVL ENSBTAP00000010206/1-530 PNSKSEEETS PLVTHPNPTG PAASTP--ES KESVL BACU019427/1-531 PNCKSEEETS PLVTHPNPTS LAASTP--ES KESVL ENSTTRP00000007826/1-530 PNCKSEEETS PLVTHPNPTG LAASTP--ES KESVL