KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:40:25 2014 Check: 00 .. Name: BACU007006/1-480 Len: 494 Check: 2390 Weight: 1.00 Name: bmy_08549T0/1-469 Len: 494 Check: 837 Weight: 1.00 Name: ENSP00000263707/1-479 Len: 494 Check: 7214 Weight: 1.00 Name: ENSTTRP00000003179/1-472 Len: 494 Check: 7374 Weight: 1.00 Name: ENSBTAP00000010210/1-479 Len: 494 Check: 9693 Weight: 1.00 // 1 50 BACU007006/1-480 ----MLFWHS QPEHLWPSPG ELYPGPPSSL LREALPLPYL KQEELPNIPR bmy_08549T0/1-469 MPEPAAFFLG KVEDT----G KTSLG----Y IKAVNHWAWV GPEGVEKTSS ENSP00000263707/1-479 ----MLFWHT QPEHY----N QHNSG---SY LRDVLALPIF KQEEPQLSPE ENSTTRP00000003179/1-472 ----MLFWHT QPEHY----N QHNSG---SY LRDVLALPIF KQEEPQLSPE ENSBTAP00000010210/1-479 ----MLFWHT QPEHY----N QHNPG---SY LRDVLALPIF KQEEPQLSPE 51 100 BACU007006/1-480 AEPPCPAFQY VLCAATSPAV KQQEETLTYL NQGQSYEVRM LCNPRLGDAT bmy_08549T0/1-469 WGSPKFEDRN GKCTIIPPP- ---------- --GQSYEIRL LENRKLGDFQ ENSP00000263707/1-479 NEARLPPLQY VLCAATSPAV KLHEETLTYL NQGQSYEIRL LENRKLGDFQ ENSTTRP00000003179/1-472 SEARLPPLQY VLCAATSPAV KLHEETLTYL NQGQSYEIRL LENRKLGDFQ ENSBTAP00000010210/1-479 NEARLPPLQY VLCAATSPAV KLHEETLTYL NQGQSYEIRL LENRKLGDFQ 101 150 BACU007006/1-480 Q-GPRLLKSV VRVVFHDRRL QYTEQQQLDG WRWSRPGDRI LDIDVPLSVG bmy_08549T0/1-469 DLNTKYVKSI IRVVFHDRRL QYTEHQQLEG WRWSRPGDRI LDIDIPLSVG ENSP00000263707/1-479 DLNTKYVKSI IRVVFHDRRL QYTEHQQLEG WRWSRPGDRI LDIDIPLSVG ENSTTRP00000003179/1-472 DLNTKYVKSI IRVVFD--CL QYT-HQQL-G WRWSRPGDRI LDIDIPLSVG ENSBTAP00000010210/1-479 DLNTKYVKSI IRVVFHDRRL QYTEHQQLEG WRWSRPGDRI LDIDIPLSVG 151 200 BACU007006/1-480 VIEPQVLPSQ LNTVEFYWDP TKRTSLFLQV HCISTEFTPR KKGGEKGVPF bmy_08549T0/1-469 ILDPRASPTQ LNAVEFLWDP SKRASAFIQV HCISTEFTPR KHGGEKGVPF ENSP00000263707/1-479 ILDPRASPTQ LNAVEFLWDP AKRASAFIQV HCISTEFTPR KHGGEKGVPF ENSTTRP00000003179/1-472 ILDPRASPTQ LNAVEFLWDP SKRASAFIQV HCISTEFT-R KHGGEKGVP- ENSBTAP00000010210/1-479 ILDPRASPTQ LNAVEFLWDP SKRASAFIQV HCISTEFTPR KHGGEKGVPF 201 250 BACU007006/1-480 RLQIDTFKPS DKELSPEHLH SAGCLIKVFK PKGADRKLKT DREKIEKQPV bmy_08549T0/1-469 RVQIDTFKQN ENGEYTEHLH SASCQIKVFK PKGADRKQKT DREKMEKRTA ENSP00000263707/1-479 RVQIDTFKQN ENGEYTEHLH SASCQIKVFK PKGADRKQKT DREKMEKRTA ENSTTRP00000003179/1-472 RVQID-LQQS ENGEYTEHLH SASCQIKVFK PKGADRKQKT DREKMEKRTA ENSBTAP00000010210/1-479 RVQIDTFKQS ENGEYSEHLH SASCQIKVFK PKGADRKQKT DREKMEKRTA 251 300 BACU007006/1-480 HERDKYQTAC ESTVFMECSP WPEPSSGPHP PLSPLALTSP NSCKLLSPER bmy_08549T0/1-469 QEKEKYQPSY ETTILSECSP WPDVVYQVNS ASSPSYNGSP NSFGLGEGN- ENSP00000263707/1-479 QEKEKYQPSY ETTILTECSP WPDVAYQVNS APSPSYNGSP NSFGLGEGN- ENSTTRP00000003179/1-472 QEKEKYQPSY ETTILSECSP WPDVVYQVNS ASSPSYNGSP NSFGLGEGN- ENSBTAP00000010210/1-479 QEKEKYQPSY ETTILSECSP WPDVVYQVNS ASSPSYNGSP SSFGLGEGN- 301 350 BACU007006/1-480 LCSSPPFALD TLGGSPAQDL NPGASILETQ QWLHRHRFSN YCRSLANFTG bmy_08549T0/1-469 --SSPTHPVE ALPVG-SDHL LPSASMQDAQ QWLHRNRFSQ FCRLFASFSG ENSP00000263707/1-479 --ASPTHPVE ALPVG-SDHL LPSASIQDAQ QWLHRNRFSQ FCRLFASFSG ENSTTRP00000003179/1-472 --SSPTHPVE ALPVG-SDHL LPSASTQDAQ QWLHRNRFSQ FCRLFASFSG ENSBTAP00000010210/1-479 --SSPTHPVE ALPVG-SDHL LPSASMQDAQ QWLHRNRFSQ FCRLFASFSG 351 400 BACU007006/1-480 TDLLKLTRQD LIQICGAADG IRLFNTLRAR PIRHRLTLYV AQEASRQENE bmy_08549T0/1-469 ADLLKMSRDD LVQICGPADG IRLFNAIKGR NVRPKMTIYV CQELEQSRVP ENSP00000263707/1-479 ADLLKMSRDD LVQICGPADG IRLFNAIKGR NVRPKMTIYV CQELEQNRVP ENSTTRP00000003179/1-472 ADLLKMSRDD LVQICGPADG IRLFNAIKGR NVRPKMTIYV CQELEQSRVP ENSBTAP00000010210/1-479 ADLLKMSRDD LVQICGPADG IRLFNAIKGR NVRPKMTIYV CQELEQSRVP 401 450 BACU007006/1-480 VPKHPDSGF- -----YQEIS LDELSAVELM GKLAELLALP ANQIHRLFHQ bmy_08549T0/1-469 LQQKRDGGGD PNLCVYHAIF LEELTTLELI EKIANLYSIS PQHIHRVYRQ ENSP00000263707/1-479 LQQKRDGSGD SNLSVYHAIF LEELTTLELI EKIANLYSIS PQHIHRVYRQ ENSTTRP00000003179/1-472 LQQKRDGGGD PNLCVYHAIF LEELTTLELI EKIANLYSIS PQHIHRVYRQ ENSBTAP00000010210/1-479 LQQKRDGSGD PNLCVYHAIF LEELTTLELI EKIANLYSIS PQHIHRVYRQ 451 500 BACU007006/1-480 GPGGILILLS DQVVQNLEDE SYFVAVVKKV QNPDGYYLVL T--- bmy_08549T0/1-469 GPTGIHVVVS NEMVQNFQDE SCFILSTLKA ESNDGYHVIL KCGL ENSP00000263707/1-479 GPTGIHVVVS NEMVQNFQDE SCFVLSTIKA ESNDGYHIIL KCGL ENSTTRP00000003179/1-472 GPTGIHVVVS NEMVQNFQDE SCFILSTLKA ESNDGYHVIL KCGL ENSBTAP00000010210/1-479 GPTGIHVVVS NEMVQNFQDE SCFILSTLKA ESNDGYHVIL KCGL