KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:40:26 2014 Check: 00 .. Name: ENSP00000380081/1-530 Len: 534 Check: 2913 Weight: 1.00 Name: ENSBTAP00000010219/1-525 Len: 534 Check: 7325 Weight: 1.00 Name: bmy_12839T0/1-451 Len: 534 Check: 7420 Weight: 1.00 Name: ENSTTRP00000005267/1-521 Len: 534 Check: 7296 Weight: 1.00 // 1 50 ENSP00000380081/1-530 MGSVGSQRLE EPSVAGTPDP GVVMSFTFDS HQLEEA-AEA AQGQGLRARG ENSBTAP00000010219/1-525 MGSVGSQRPR EASVASMPHG GVVMSFSFDS GHLEEAVAGA TQAQGGRTRG bmy_12839T0/1-451 MGSVGSQQLQ EPSVASTPHR SVVMSFSFDS GQLEEVVAGV AQAQGSRARG ENSTTRP00000005267/1-521 MGSVGSQHLQ EPSVASTPHR SVVMS--FDS GPLEEVAAGV AQAQGSRARG 51 100 ENSP00000380081/1-530 VPAFTDTTLD EPVPDDRYHA IYFAMLLAGV GFLLPYNSFI TDVDYLHHKY ENSBTAP00000010219/1-525 IPIFTNSAAE EPAPDDRYHA IYFAMLLAGV GFLLPYNSFI TDVDYLHHKY bmy_12839T0/1-451 IPISTDS--- ---------- ---------- ---------- ---------- ENSTTRP00000005267/1-521 IPIFTDSXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX TDVDYLHHKY 101 150 ENSP00000380081/1-530 PGTSIVFDMS LTYILVALAA VLLNNVLVER LTLHTRITAG YLLALGPLLF ENSBTAP00000010219/1-525 PGTSIVFDMS LTYILVALVA VLLNNALVER LSLHTRITAG YLLALGPLLF bmy_12839T0/1-451 -GTSIVFDMS LTYILVALVA VLLNNALVER LSLHTRITAG YLLALGPLLF ENSTTRP00000005267/1-521 PGTSIVFDMS LTYILVALVA VLLNNALVER LSLHTRITAG YLLALGPLLF 151 200 ENSP00000380081/1-530 ISICDVWLQL FSRDQAYAIN LAAVGTVAFG CTVQQSSFYG YTGMLPKRYT ENSBTAP00000010219/1-525 ISICDVWLQL FSRDQAYAIN LAAVGTVAFG CTVQQSSFYG YTGMLPKRYT bmy_12839T0/1-451 ISICDVWLQL FSRDQAYAIN LAAVGTVAFG CT-------- ---------- ENSTTRP00000005267/1-521 ISICDVWLQL FSRDQAYAIN LAAVGTVAFG CTVQQSSFYG YTGMLPKRYT 201 250 ENSP00000380081/1-530 QGVMTGESTA GVMISLSRIL TKLLLPDERA STLIFFLVSV ALELLCFLLH ENSBTAP00000010219/1-525 QGVMTGESTA GVMVSLSRIL TKLLLPDERA GTLIFFLVSA GLELLCFLLH bmy_12839T0/1-451 -------GTA GVMVSLSRIL TKLLLPDERA GTLIFFLVSA GLELLCFLLH ENSTTRP00000005267/1-521 QGVMTGESTA GVMVSLSRIL TKLLLPDERA GTLIFFLVSA GLELLCFLLH 251 300 ENSP00000380081/1-530 LLVRRSRFVL FYTTRP---R DSHRGRPGLG RGYGYRVHHD VVAGDVHFEH ENSBTAP00000010219/1-525 LLVRGSRFVL YHTARPRHCR PSRRA----- ---GYRVHHD VAAEDVHFEH bmy_12839T0/1-451 LLVRGSRFVL YHTARP---R PGRRA----- ---GYRVHHD VAAEDVHF-- ENSTTRP00000005267/1-521 LVVRGSRFVL YHTARP---R PSHTA----- ---GYRVHHD VAAEDVHFEH 301 350 ENSP00000380081/1-530 PAPALAPNES PKDSPAHEVT GSGGAYMRFD VPRPRVQRSW PTFRALLLHR ENSBTAP00000010219/1-525 QGPALANGGS PKDSPAHEVT G-GGAYTRFD VPRPRIRRSW PSFRALLLHR bmy_12839T0/1-451 -GPGLANGGS PKDSPAHEVT GGGGAYTRFD VPRPRIRRSW PSFRALLLHR ENSTTRP00000005267/1-521 QGPGLANGGS PKDSPAHEVA GGGGAYTRFD VPRPRTRRSW PSFRALLLHR 351 400 ENSP00000380081/1-530 YVVARVIWAD MLSIAVTYFI TLCLFPGLES EIRHCILGEW LPILIMAVFN ENSBTAP00000010219/1-525 YVVARVIWAD MLSIAVTYFI TLCLFPGLES EIRHCILGEW LPILLMAVFN bmy_12839T0/1-451 YVVARVIWAD MLSIAVTYFI TLCLFPGLES EIRHCILGEW LPILIMAVFN ENSTTRP00000005267/1-521 YVVARVIWAD MLSIAVTYFI TLCLFPGLES EIHHCILGEW LPILIMAVFN 401 450 ENSP00000380081/1-530 LSDFVGKILA ALPVDWRGTH LLACSCLRVV FIPLFILCVY PSGMPALRHP ENSBTAP00000010219/1-525 LSDFVGKILA ALPMDWRGTH LLACSCLRVV FIPLFILCVY PSGTPALRHP bmy_12839T0/1-451 LSDFVGKILA ALPMEWRGTH LLACSCLRVV FIPLFILCVY PSSTPALRHP ENSTTRP00000005267/1-521 LSDFVGKILA ALPMDWQGTH LLACACLRVV FIPLFILCVY PSSTPALRHP 451 500 ENSP00000380081/1-530 AWPCIFSLLM GISNGYFGSV PMILAAGKVS PKQRELAGNT MTVSYMSGLT ENSBTAP00000010219/1-525 AWPCVLSLLM GISNGYFGSV PMILAAGKVG PKQRELAGNT MTVSYMTGLT bmy_12839T0/1-451 AWPCVLSLLM GISNGYFGSV PMILAAGKVS PKQRELAGNT MTVSYMTGLT ENSTTRP00000005267/1-521 AWPCILSLLM GISNGYFGSV PMILAAGKVS PKQRELAGNT MTVSYMTGLT 501 550 ENSP00000380081/1-530 LGSAVAYCTY SLTRDAHGSC LHASTANGSI LAGL ENSBTAP00000010219/1-525 LGSAVAYCTY SLTRDAHRSC LRPSAANASF PAGL bmy_12839T0/1-451 LGSAVAYCTY SLTRDAHGSC PDRSAANASF PAGL ENSTTRP00000005267/1-521 LGSAVAYCTY SLTRDAHGTC PDRSAANASF PAGL