KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:40:30 2014 Check: 00 .. Name: ENSP00000290431/1-613 Len: 647 Check: 6075 Weight: 1.00 Name: ENSBTAP00000010236/1-600 Len: 647 Check: 3324 Weight: 1.00 Name: ENSTTRP00000009024/1-624 Len: 647 Check: 9152 Weight: 1.00 Name: BACU004097/1-537 Len: 647 Check: 4799 Weight: 1.00 Name: bmy_18919T0/1-486 Len: 647 Check: 1563 Weight: 1.00 // 1 50 ENSP00000290431/1-613 ---------- ---------- -MAEASRWHR GGASKHKLHY RKEVEITTTL ENSBTAP00000010236/1-600 ---------- ---------- -MAEASRWHL GGTPKHKLHY REDVEIRTTL ENSTTRP00000009024/1-624 ---------- ---------- -MAEASRWHL GGTPKHKLHY RKEVEMRTTL BACU004097/1-537 MSIAQAPPAW GGERASSSKF AMAEASRWHL G--------- ---------- bmy_18919T0/1-486 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000290431/1-613 QELLLYFIFL INLCILTFGM VNPHMYYLNK VMSSLFLDTS VPGEERTNFK ENSBTAP00000010236/1-600 QELLLYSIFL INLC------ ---------- ---------- ISGEERTNFK ENSTTRP00000009024/1-624 QEVLLYLIFL INLCILTFGM VNPHMYYLNK VMSSLFLDTS VHGEERINFK BACU004097/1-537 ---------- -----VTFGM VNPHMYYLNK VMSSLFLDTS VHGEERTNFK bmy_18919T0/1-486 ---------- ---------M VNPHMYYLNK VMSSLFLDTS VHGEERTNFK 101 150 ENSP00000290431/1-613 SIRSITDFWK FMEGPLLEGL YWDSWYNNQQ LYNLKNSSRI YYENILLGVP ENSBTAP00000010236/1-600 SIRSITDFWK FMEGPLLDGL YWDSWYNNEN LYDLKNSSRI YYENILLGLP ENSTTRP00000009024/1-624 SIRSITDFWK FMEGPLLEGL YWDSWYNNKS LYDLKNSSRI YYENILLGVP BACU004097/1-537 SIRSITDFWK FMEGPLLEGL YWDSWYNNKN LYDLKNSSRI YHENILLGVP bmy_18919T0/1-486 SIRSITDFWK FMEGPLLEGL YWDSWYNNKN LYDLKNSSRI YYENILLGVP 151 200 ENSP00000290431/1-613 RVRQLKVRNN TCKVYSSFQS LMSECYGKYT SANEDLSNFG LQINTEWRYS ENSBTAP00000010236/1-600 RVRQLKVRNG TCKVHSFFRS LMDECYDKYT SKNEDTADFG LKQHTEWKYS ENSTTRP00000009024/1-624 RVRQLKVRNN TCKVHSSFQS LMNECYDKYT SENEDLSDFG LKYDTEWKYS BACU004097/1-537 RVRQLKVRNN TCKVHSSFQS LMNECYDKYT SENEDLSDFG LKYDTEWKYS bmy_18919T0/1-486 RVRQLKVRNN TCKVHSSFQS LMNECYDKYT SENEDLSDFG LKYDTEWKYS 201 250 ENSP00000290431/1-613 TSNTNSPWHW GFLGVYRNGG YIFTLSKSKS ETKNKFIDLR LNSWITRGTR ENSBTAP00000010236/1-600 SPRTNSPWHW GFVGVYQNGG YIFTLSKSKS ETLNKFINLR MNSWITRGTR ENSTTRP00000009024/1-624 APIINSPWHW GFTGVYRNGG YIFTLSKSKS ETLNKFINLR MNSWITRSTR BACU004097/1-537 APSINSPWHW GFTGVYRNGG YIFTLSKSKS ETLNKFINLR MNSWITRSTR bmy_18919T0/1-486 APSINSPWHW GFTGVYRNGG YIFTLSKSKS ETLNKFINLR MNSWITRSTR 251 300 ENSP00000290431/1-613 VIFIDFSLYN ANVNLFCIIR LVAEFPATGG ILTSWQFYSV KLLRYVSYYD ENSBTAP00000010236/1-600 VIFIDFSVYN ANVNLFCIIR LVAEFPATGG ILTSWQFYSV KLLRYVSFYD ENSTTRP00000009024/1-624 VIFIDFSLYN ANVNLFCVIR LVAEFPATGG ILTSWQFYSV KLLRYVSYYD BACU004097/1-537 VVFIDFSVYN ANVNLFCIIR LVAEFPATGG ILTSWQFYSV KLLRYVSYYD bmy_18919T0/1-486 VIFIDFSLYN ANVNLFCIIR ESASY----- --QHYSPFPI VLL------- 301 350 ENSP00000290431/1-613 YFIASCEITF CIFLFVFTTQ EVKKIKEFKS AYFKSIWNWL ELLLLLLCFV ENSBTAP00000010236/1-600 YFIASCEIIF CIFIIVFTIQ EIKKLKEFKF AYFKSIWNWL ELLLLVLCFS ENSTTRP00000009024/1-624 YFIASCEITF CIFLIVFTTQ EVLKIKEFKS AYFKSSWNWL ELLLLVLCFV BACU004097/1-537 YFIASCEVTF CIFLIVFTTQ EVQKIKEFKS G--------- ---------- bmy_18919T0/1-486 ---------- ---------- ---------- ---------- -------CFV 351 400 ENSP00000290431/1-613 AVSFNTYYNV QIFLLLGQLL KSTEKYSDFY FLACWHIYYN NIIAITIFFA ENSBTAP00000010236/1-600 TVFFSLYSNM QIYRMIGRLL RNTEKYSDFY FLAYWHIYYN NIIAITIFFA ENSTTRP00000009024/1-624 AVFFNSYCNI QTSLLLGQLL KSTEKYSDFY FLAHWHIYYN NIIAITIFFA BACU004097/1-537 ---------- ---------- ---------Y FKSSW----- NWLELLLLV- bmy_18919T0/1-486 AVFFNTYCNI QIFLLLGQLL KSTEKYSDFY FLAYWHIYYN NIIAITIFFA 401 450 ENSP00000290431/1-613 WIKIFKFISF NKTMSQLSST LSRCVKDIVG FAIMFFIIFF AYAQLGFLVF ENSBTAP00000010236/1-600 WIKIFKFISF NKTMSQLSST LSRCIKDIIG FAIMFFIIFF AYAQLGFLVF ENSTTRP00000009024/1-624 WIKIFKFISF NKTMSQLSST LSRCINDIVG FAIMFFIIFF AYAQLGFLVF BACU004097/1-537 ---IFKFISF NKTMSQLSST LSRCIKDIVG FAIMFFIIFF AYAQLGFLVF bmy_18919T0/1-486 WIKIFKFISF NKTMSQLSST LSRCIKDIVG FAIMFFIIFF AYAQLGFLVF 451 500 ENSP00000290431/1-613 GSQVDDFSTF QNSIFAQFRI VLGDFNFAGI QQANPILGPI YFITFIFFVF ENSBTAP00000010236/1-600 GSQVDDFSTF QNAIFTQFRI VLGDFNFAGI QQANRILGPI YFITFIFFVF ENSTTRP00000009024/1-624 GSQVDDFSTF QNSIFTQFRI VLGDFNFAGI QQASRILGPI YFITFIFFVF BACU004097/1-537 GSQVDDFSTF QNSIFAQFRI VLGDFNFAGI QQASRILGPI YFITFIFFVF bmy_18919T0/1-486 GSQVDDFSTF QNSIFTQFRI VLGDFNFAGI QQASRILGPI YFITFIFFVF 501 550 ENSP00000290431/1-613 FVLLNMFLAI INDTYSEVKA DYSIGRRLDF ELGKMIKQSY KNVLEKFRLK ENSBTAP00000010236/1-600 FVLLNMFLAI INDTYSEVKA DYSIGRRPDF QLGKMIKKSY NNALEKLKLK ENSTTRP00000009024/1-624 FVLLNMFLAI INDTYSEVKA DYSIGRRPDF ELGKMIKKSY HNALEKLKLK BACU004097/1-537 FVLLNMFLAI INDTYSEVKA DYSIGRRPGF ELGKMIKKSY HNALEKLKLK bmy_18919T0/1-486 FVLLNMFLAI INDTYSEVKA DYSIGRRPDF ELGKMIKKSY HNALEKLKLK 551 600 ENSP00000290431/1-613 KAQKDEDKKT KGSGDLAEQA RREGFDENEI QNAEQMKKWK ERLEKKYYSM ENSBTAP00000010236/1-600 KPETDEDKKR MENKDLAEKA RREGFDEKEI QSAEQMKKWK ERLEKKYYST ENSTTRP00000009024/1-624 KPETDEDKK- RKSRDLAEQA RREGFDEKEI QSAEQMKKWK ERLEKKYYST BACU004097/1-537 KPETDEDKKS RKSRDLAEQA RREGFDEKEI QSAEQMKKWK ERLEKKYYST bmy_18919T0/1-486 KPETDEDKKS RKSRDLAEKA RREGFDEKEI QSAEQMKKWK ERLEKKYYST 601 650 ENSP00000290431/1-613 EIQDDYQPVT QEEFRD---- GTTTKYKMRF SECLTKRI-- ------- ENSBTAP00000010236/1-600 EIQDDYQTVT QQEFRDLFLY AVELEKELHY VSLKLNRVMR KVSALQY ENSTTRP00000009024/1-624 EIQDDYQPVT QQEFRDLFLY AVELEKELHY VSLKLNRVMR KVSALQ- BACU004097/1-537 EIQDDYQPVT QQEFRE-LID DISINDDCR- ---------- ------- bmy_18919T0/1-486 EIQDDYQPVT QQEFRE---- ---------- ---------- -------