KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:40:34 2014 Check: 00 .. Name: ENSTTRP00000012969/1-840 Len: 1303 Check: 3685 Weight: 1.00 Name: bmy_16640T0/1-636 Len: 1303 Check: 6015 Weight: 1.00 Name: BACU008487/1-1202 Len: 1303 Check: 6241 Weight: 1.00 Name: ENSP00000365624/1-841 Len: 1303 Check: 5182 Weight: 1.00 Name: ENSBTAP00000010247/1-841 Len: 1303 Check: 8835 Weight: 1.00 // 1 50 ENSTTRP00000012969/1-840 ---------- ---------- ---------- ---------- ---------- bmy_16640T0/1-636 ---------- ---------- ---------- ---------- ---------- BACU008487/1-1202 MSHAAEPARD GVEASAEGPR AVFLLLEERR PADSAQLLSL NSLLPESGIV ENSP00000365624/1-841 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010247/1-841 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000012969/1-840 ---------- ---------- ---------- ---------- ---------- bmy_16640T0/1-636 ---------- ---------- ---------- ---------- ---------- BACU008487/1-1202 ADIELENVLD PDSFYELKSQ PLSLRSSLPI SLQATPATPA TLSASSSAGG ENSP00000365624/1-841 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010247/1-841 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000012969/1-840 ---------- ---------- -MAQALSEEE FQRMQ----- ---------- bmy_16640T0/1-636 ---------- ---------- ---------- ---------- ---------- BACU008487/1-1202 SRTPAMSSSS SSRVLLRQQL MRAQAQEQER RERREQAAAS PFPSPAPASP ENSP00000365624/1-841 ---------- ---------- -MAQALSEEE FQRMQ----- ---------- ENSBTAP00000010247/1-841 ---------- ---------- -MAQALSEEE FQRMQ----- ---------- 151 200 ENSTTRP00000012969/1-840 ---------- ---------- ---------- ---------- ---------- bmy_16640T0/1-636 ---------- ---------- ---------- ---------- ---------- BACU008487/1-1202 AISVVGVSAG GHTLGRPPPA QVPREVLKVQ THLENPTRYH LQQARRQQVK ENSP00000365624/1-841 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010247/1-841 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000012969/1-840 ---------- ---------- ---------- ---------- ---------- bmy_16640T0/1-636 ---------- ---------- ---------- ---------- ---------- BACU008487/1-1202 QYLSTTLGPK LASQALTPPP GAASAQPLPA PEAAHATGPT GSAPNSPMAL ENSP00000365624/1-841 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010247/1-841 ---------- ---------- ---------- ---------- ---------- 251 300 ENSTTRP00000012969/1-840 ---------- ---------- ---------- ---------- ---------- bmy_16640T0/1-636 ---------- ---------- ---------- ---------- ---------- BACU008487/1-1202 LTIGSSSEKE IDDVIDEIIS LESSYNDEML SYLPGGTTGL QLPSTLPVSG ENSP00000365624/1-841 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010247/1-841 ---------- ---------- ---------- ---------- ---------- 301 350 ENSTTRP00000012969/1-840 ---------- ---------- ---------- ---------- ---------- bmy_16640T0/1-636 ---------- ---------- ---------- ---------- ---------- BACU008487/1-1202 NLLDVYSSQG VATPAITVSN SCPAELPNIK REISETEAKA LLKERQKKDN ENSP00000365624/1-841 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010247/1-841 ---------- ---------- ---------- ---------- ---------- 351 400 ENSTTRP00000012969/1-840 ---------- ---------- ---------- ---------- ---------- bmy_16640T0/1-636 ---------- ---------- ---------- ---------- ---------- BACU008487/1-1202 HNLIERRRRF NINDRIKELG TLIPKSSDPE MRWNKGTILK ASVDYIRKLQ ENSP00000365624/1-841 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010247/1-841 ---------- ---------- ---------- ---------- ---------- 401 450 ENSTTRP00000012969/1-840 ---------- ---------- ---------- -------AQL LELRTNNYQL bmy_16640T0/1-636 ---------- ---------- ---------- ---------- --MTAGNYQG BACU008487/1-1202 KEQQRSKDLE SRQRSLEQAN RSLQLRIQVW KEEAVAGAQL LELRTNNYQL ENSP00000365624/1-841 ---------- ---------- ---------- -------AQL LELRTNNYQL ENSBTAP00000010247/1-841 ---------- ---------- ---------- -------AQL LELRTNNYQL 451 500 ENSTTRP00000012969/1-840 SDELRKNGVE LTSLRQKVAY LDKEFNKAQK ALSKSKKAQE VEGLLSENEM bmy_16640T0/1-636 WGYWWTMGQC PAGL------ ---------- ---------- ---------- BACU008487/1-1202 SDELRKNGVE LTSLRQKVAY LDKEFNKAQK ALSKSKKAQE VEGLLSENEM ENSP00000365624/1-841 SDELRKNGVE LTSLRQKVAY LDKEFSKAQK ALSKSKKAQE VEVLLSENEM ENSBTAP00000010247/1-841 SDELRKNGVE LTSLRQKVAY LDKEFSKAQK ALSKSKKAQE VEGLLSENEM 501 550 ENSTTRP00000012969/1-840 LQAKLHSQEE DFRLQNSTLM AEFSK----- ---------- ---------- bmy_16640T0/1-636 --------TE DHRGRAGRLG LSLSS----- ---------- ---------- BACU008487/1-1202 LQAKLHSQEE DFRLQNSTLM AEFSKTQTPP QKKAGSGTIH DADILDQQLP ENSP00000365624/1-841 LQAKLHSQEE DFRLQNSTLM AEFSK----- ---------- ---------- ENSBTAP00000010247/1-841 LQAKLHSQEE DFRLQNSTLM AEFSK----- ---------- ---------- 551 600 ENSTTRP00000012969/1-840 ---------- -LCSQMEQLE RENQQLKDGA ARAGATQAGS LVDGELLRLQ bmy_16640T0/1-636 ---------- -VC------- ---------- ---------- ---------- BACU008487/1-1202 EEPEVLDCDC ELCSQMEQLE RENQQLKDGA ARAGAAQTGS LVDGELLRLQ ENSP00000365624/1-841 ---------- -LCSQMEQLE QENQQLKEGA AGAGVAQAGP LVDGELLRLQ ENSBTAP00000010247/1-841 ---------- -LCSQMEQLE RENQQLKAGA AREGAAQAGS LVDGELLRLQ 601 650 ENSTTRP00000012969/1-840 AENTALQKNV AALQERYGKE AGRSPAASED QGDPLGGPAS PVLAPMPLAE bmy_16640T0/1-636 ---------- ---------- ---------- -------PSL PPITP----- BACU008487/1-1202 AENTALQKNV AALQERYGKE AGRSPAASED QGDPLGGPAS PVLAPLPLAE ENSP00000365624/1-841 AENTALQKNV AALQERYGKE AGKFSAVSEG QGDPPGGPAP TVLAPMPLAE ENSBTAP00000010247/1-841 AENTALQKNV AALQERYGKE AGRPPAASEG EGDPPGGPAS PVVAPMPLAE 651 700 ENSTTRP00000012969/1-840 VELKWEMEKE EKRLLWEQLQ GLE-TLKQAE TSRLQEELAK LAEKLKKKQE bmy_16640T0/1-636 ---------- ---------- ---------- ---------- ---------- BACU008487/1-1202 VELKWEMEKE EKRLLWEQLQ GLEQTLKQAE TSRLQEELAK LAEKLKKKQE ENSP00000365624/1-841 VELKWEMEKE EKRLLWEQLQ GLE-SSKQAE TSRLQEELAK LSEKLKKKQE ENSBTAP00000010247/1-841 VELKWEMEKE EKRLLWEQLQ GLE-TLKQAE TSRLQEELAK LSEKLKKKQE 701 750 ENSTTRP00000012969/1-840 SFCRLQTEKE TLFNDSRNKI EELQQRKEAD LKAQLARTQK LQQELEAANQ bmy_16640T0/1-636 ---------- ------RNKI EELQQRKEAD LKAQLARTQK LQQELEAANQ BACU008487/1-1202 ---------- ------RNKI EELQQQKEAD LKAQLARTQK LQQELEAANQ ENSP00000365624/1-841 SFCRLQTEKE TLFNDSRNKI EELQQRKEAD HKAQLARTQK LQQELEAANQ ENSBTAP00000010247/1-841 SFCRLQTEKE TLFNDSRNKI EELQQRKEAD LKAQLARTQK LQQELEAANQ 751 800 ENSTTRP00000012969/1-840 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_16640T0/1-636 SLAELRDQRQ GELLEHAAAL RALQDQVSIQ SADAQEQVEG LLAENNALRT BACU008487/1-1202 SLAELRDQRQ GELLEHAAAL RALQDQVSIQ SADAQEQVEG LSAENNALRT ENSP00000365624/1-841 SLAELRDQRQ GERLEHAAAL RALQDQVSIQ SADAQEQVEG LLAENNALRT ENSBTAP00000010247/1-841 SLAELRDQRQ GERLEHAAAL RALQDQVSLQ SADAQEQVEG LLTENNALRT 801 850 ENSTTRP00000012969/1-840 XXXXXXXIQT AKTQELNTLR EQTAGLTAEL QQRQTEYEDL MGQKDDLNSQ bmy_16640T0/1-636 SLAALEQIQT AKTQELNMLR EQTAGLTAEL QQRQTEYEDL MGQKDDLNSQ BACU008487/1-1202 SLAALEQIQT AKTQELNMLR EQTAGLTAEL QQRQTEYEDL MGQKDDLNSQ ENSP00000365624/1-841 SLAALEQIQT AKTQELNMLR EQTTGLAAEL QQQQAEYEDL MGQKDDLNSQ ENSBTAP00000010247/1-841 SLAALEQIQT AKTQELNMLR EQTAGLTAEL QQRQTQYEDL MGQKDDLNCQ 851 900 ENSTTRP00000012969/1-840 LQESLRANSR LLEQLQELGQ EKEQLTQELQ EARKSAEKRK AMLDELAMET bmy_16640T0/1-636 LQESLRANSR LLEQLQELGQ EKEQLTQELQ EARKSAEKRK AMLDELAMET BACU008487/1-1202 LQESLRANSR LLEQLQELGQ EKEQLTQELQ EARKSAEKRK AMLDELAMET ENSP00000365624/1-841 LQESLRANSR LLEQLQEIGQ EKEQLTQELQ EARKSAEKRK AMLDELAMET ENSBTAP00000010247/1-841 LQESLRANSR LLEQLQELGQ EKEQLIQELQ EARKSAEKRK AMLDELAMET 901 950 ENSTTRP00000012969/1-840 LQEKSQHKEE LG-VRLRHEK EVLGVPARYE RELREXXXXX XXXXXXXXXX bmy_16640T0/1-636 LQEKSQHKEE LGAVRLRHEK EVLGVRARYE RELRELHEDK KRQEEELRGQ BACU008487/1-1202 LQEKSQHKEE LGAVRLRHEK EVLGVRARYE RELRELHEDK KRQEEELRGQ ENSP00000365624/1-841 LQEKSQHKEE LGAVRLRHEK EVLGVRARYE RELRELHEDK KRQEEELRGQ ENSBTAP00000010247/1-841 LQEKSQHKEE LGAVRLRHEK EVLGVRARYE RELRELHEDK KRQEEELRGQ 951 1000 ENSTTRP00000012969/1-840 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXESLQQQQ bmy_16640T0/1-636 IREEKARTRE LETLQQTVEE LQAQVHSMDG AKGWFERRLK EAEESLQQQQ BACU008487/1-1202 IREEKARTRE LETLQQMVEE LQAQVHSMDG AKGWFERRLK EAEESLQQQQ ENSP00000365624/1-841 IREEKARTRE LETLQQTVEE LQAQVHSMDG AKGWFERRLK EAEESLQQQQ ENSBTAP00000010247/1-841 IREEKARTRE LETLQQTVEE LQAQVHSMDG AKGWFERRLK EAEESLQQQQ 1001 1050 ENSTTRP00000012969/1-840 QEQEEALKQC REQHAGELKS KEEELQGVRD QLQQAQEERD CHLKTISSLK bmy_16640T0/1-636 QEQEEALKQC REQHAGELKS KEEELQGVRD QLQQAQEERA CHLKTISSLK BACU008487/1-1202 QEQEEALKQC REQHAGELKS KEEELQGVRD QLQQAQEERD CHLKTISSLK ENSP00000365624/1-841 QEQEEALKQC REQHAAELKG KEEELQDVRD QLEQAQEERD CHLKTISSLK ENSBTAP00000010247/1-841 QEQEEALRQC QEQHTRELKS KEEELQGVQE QLRQAQEERD CHLKTINSLK 1051 1100 ENSTTRP00000012969/1-840 QEVKDTVDGQ RILEKKGSAA LKDLKRQLHL ERKRADKLQE RLQDILTNSK bmy_16640T0/1-636 QEVKDTVDGQ RILEKKGSAA LKDLKRQLHL ERKRADKLQE RLQDILTNSK BACU008487/1-1202 QEVKDTVDGQ RILEKKGSAA LKDLKRQLHL ERKRADKLQE RMQDILTNSK ENSP00000365624/1-841 QEVKDTVDGQ RILEKKGSAA LKDLKRQLHL ERKRADKLQE RLQDILTNSK ENSBTAP00000010247/1-841 QEVKDTVDGQ RILEKKGSAA LKDLKRQLHL ERKRADKLQE RLQDILTNSK 1101 1150 ENSTTRP00000012969/1-840 SRSGLEELVL SEMNSPSRTQ TGDSSSISSF SYREILREKE SSTVPARXXX bmy_16640T0/1-636 SRSGLEELVL SEMNSPSRTQ TGDSSSISSF SYREILREKE SSTVPARSLS BACU008487/1-1202 SRSGLEELVL SEMNSPSRTQ TGDSSSISSF SYREILREKE SSTVPARSLS ENSP00000365624/1-841 SRSGLEELVL SEMNSPSRTQ TGDSSSISSF SYREILREKE SSAVPARSLS ENSBTAP00000010247/1-841 SRSGLEELVL SEMNSPSRTQ TGDSSSVSSF SYREILREKE SSTVPARSLS 1151 1200 ENSTTRP00000012969/1-840 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXQ EKWMLKEKVK HLEVSSASMA bmy_16640T0/1-636 SSPQAQPPRP AELSDEEVAE LFQRLAETQQ EKWMLEEKVK HLEVSSASMA BACU008487/1-1202 SSPQAQPPRP AELSDEEVAE LFQRLAETQQ EKWMLEEK-- ---------- ENSP00000365624/1-841 SSPQAQPPRP AELSDEEVAE LFQRLAETQQ EKWMLEEKVK HLEVSSASMA ENSBTAP00000010247/1-841 SSPQAQPPRP AELSDEEVAE LFQRLAEMQQ EKWMLEEKVK HLEVSSASMA 1201 1250 ENSTTRP00000012969/1-840 EDLCRKSAII ETYVMDSRID VSVAAGHTDR SGLGSVLRDL VKPGDENLRE bmy_16640T0/1-636 EDLCRKSAII ETYVMDSRID VSVAAGHTDR SGLGSVLRDL VKPGDENLRE BACU008487/1-1202 ---------- ---------- ---------- ---------- ---------- ENSP00000365624/1-841 EDLCRKSAII ETYVMDSRID VSVAAGHTDR SGLGSVLRDL VKPGDENLRE ENSBTAP00000010247/1-841 EDLCRKSAII ETYVMDSRID VSVAAGHTDR SGLGSVLRDL VKPGDENLRE 1251 1300 ENSTTRP00000012969/1-840 MNKKLQNMLE EQLTKNMHLH K--DMEVLSQ EIVRLSKECV GSPDPDLEPG bmy_16640T0/1-636 MNKKLQNMLE EQLTKNMHLH KASDMEVLSQ EIVRLSKECV GSPDPDLEPG BACU008487/1-1202 ---------- ---------- ---DMEVLSQ EIVRLSKECV GSPNPDLEPG ENSP00000365624/1-841 MNKKLQNMLE EQLTKNMHLH K--DMEVLSQ EIVRLSKECV GPPDPDLEPG ENSBTAP00000010247/1-841 MNKKLQNMLE EQLTKNMHLH K--DMEVLSQ EIVRLSKECV GSPDPDLEPG 1301 1350 ENSTTRP00000012969/1-840 EAS bmy_16640T0/1-636 EAS BACU008487/1-1202 EAS ENSP00000365624/1-841 ETS ENSBTAP00000010247/1-841 EAS