KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:40:34 2014 Check: 00 .. Name: ENSP00000395232/1-385 Len: 512 Check: 5500 Weight: 1.00 Name: ENSBTAP00000010261/1-366 Len: 512 Check: 3827 Weight: 1.00 Name: bmy_08159T0/1-511 Len: 512 Check: 7550 Weight: 1.00 Name: ENSTTRP00000002379/1-371 Len: 512 Check: 6787 Weight: 1.00 // 1 50 ENSP00000395232/1-385 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010261/1-366 ---------- ---------- ---------- ---------- -------MKK bmy_08159T0/1-511 MRSGTGHGPR SLSLVGGRGS GEPIVEARDR FGGAREEGRA SSRVTPGIKK ENSTTRP00000002379/1-371 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000395232/1-385 ---------- ---MSLILNI LREMLEYFGV PVEQVLLIWE NKDYGSTRSI ENSBTAP00000010261/1-366 QCFFEFASVF ASSMSFILSI LREMLEYFGV PINQILHIWE NKDYGSARSI bmy_08159T0/1-511 QCFLKFASVF ASSMSFILSI LREMLEYFGV PVNQVLQIWE NKDYGSARSI ENSTTRP00000002379/1-371 ---------- --------SI LREMLEYFGV PVNQVLQIWE NKDYGSARSI 101 150 ENSP00000395232/1-385 VRIIGKMLPL EPCRRPNFEL IPLLNSVDSD NCGSMVPSFA DILYVANDEE ENSBTAP00000010261/1-366 VRIIGKLLPL EPCPRPNFEL VPLLNSVDPA NCGSVVPSFA DVWCVANDEE bmy_08159T0/1-511 VRIIGKILPL EPCPRPNFEL IPLLISVDPA NCGSVVPSFA DVLYVMNDEE ENSTTRP00000002379/1-371 VRVIGKILPL EPCPRPNFEL IPLLNSVDPA NCGSVVPSFA DVLYVTNDEE 151 200 ENSP00000395232/1-385 ASYLRFRNSI WKNEE-EKVE IFHPLRLVRD PLSPAVRQKE TVKNDLPVNE ENSBTAP00000010261/1-366 ASYLRFRT-- WKNEEEEKIA SFHPLQLFEG PLTPAVRRNK PRKNDWPESE bmy_08159T0/1-511 ASYLRFRNSI WKNEEEEKIA SFHPLQLVED PLTPALRHNK PTKNDWPESE ENSTTRP00000002379/1-371 ASYLRFRNSI WKNEEGEKIA SFHPLQLVED PLTPALRHNK PTKSDWPESE 201 250 ENSP00000395232/1-385 AAIRKIAALE NELTFLRSQI AAIVEMQELK NSTNSSSFGL SDERIS-LGQ ENSBTAP00000010261/1-366 TAIKKIAALE DELAFLRSQI AAIVGRQELG NSTKAGFLDL -NGRPSGFGQ bmy_08159T0/1-511 AAIKKIAALE DELAFLRSQI AAILGRQELR NCTNSGSLDL KNDRPSGLGQ ENSTTRP00000002379/1-371 AAIKKIAALE DELAFLRSQI AAIVGRQELR NSTNSGSLDL KNDRPSGLGH 251 300 ENSP00000395232/1-385 LSSSRAAHLS VDPDQLPGSV LSPPPPPPLP PQFSSLQPPC FPPVQPGSNN ENSBTAP00000010261/1-366 KPSSGATQLN VKQDSFSSSV RPSSPPPPSP PQISSVQPPC SPLMKIASNS bmy_08159T0/1-511 MPSSGTTQLS VEXDSFSSSV FPSPPPPPPP PQVSSLQPPC SPLVQIASNN ENSTTRP00000002379/1-371 MPSSGTTQLS VEPDSFSSSV FPSPPPPPPP PQVSSLRPPC SPLVQTASNN 301 350 ENSP00000395232/1-385 ICDSDNPATE MSKQNPAANK TNYSHHSKSQ RNKDIPNMLD VLKDMNKVKL ENSBTAP00000010261/1-366 ICASDNSTTE VKQQHPDAGK TNYSHHSKNQ KNEAVPNMLD VLKDMNKVKL bmy_08159T0/1-511 ICASDNSATE VKKQHPDTRK TNFSHHSKNQ KNKDVPNMLD VLKDVNKVKL ENSTTRP00000002379/1-371 ICASDNSATE VKKQHPDTRK TNFSHHSKNH K--DVPNMLD VLKDVNKVKL 351 400 ENSP00000395232/1-385 RAIERSPGGR PIHKRKRQNS HWDPVSLISH ALKQKFAFQE DDSFEKENRS ENSBTAP00000010261/1-366 RAIERSPGGR PIHKRKREDS PWDPVSLISH ALKQKFAFQE EDSFEKEDNC bmy_08159T0/1-511 RAIERSPGGR PIHKRKRQDS PWDPVSLIAH ALKQKFAFQE EDSFEKENNS ENSTTRP00000002379/1-371 RAVERSPGCR PIHKRKRQDS PWDPVSLISH ALKQKFAFQE EDSFEKENNS 401 450 ENSP00000395232/1-385 WESSPFSSPE TSRF------ ---------- --------GH HI-----SQS ENSBTAP00000010261/1-366 WESSPFSSPE TSRV------ ---------- ---------- RL-------- bmy_08159T0/1-511 WESSPFSSPE NSRLLAETTG PRSPGLSWLR PPGPLQSRQP HLDTIFHSQK ENSTTRP00000002379/1-371 WECSPFSSPE TSRF------ ---------- --------GN HI-----SQS 451 500 ENSP00000395232/1-385 EGQRTKEEMV NTKAVDQGIS NTSLLNSRI- ---------- ---------- ENSBTAP00000010261/1-366 ---------- ---------- ---------- ---------- ---------- bmy_08159T0/1-511 DIE-LKEELT DTAGVAQATS YRACVCTYKA GLQKYASILI PTCERISSPV ENSTTRP00000002379/1-371 EGH-TKEELT NTAGIAQATS Y--------- ---------- ---------- 501 550 ENSP00000395232/1-385 ---------- -- ENSBTAP00000010261/1-366 ---------- -- bmy_08159T0/1-511 NEVKCSLYTG VY ENSTTRP00000002379/1-371 ---------- --