KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:40:40 2014 Check: 00 .. Name: ENSTTRP00000006299/1-288 Len: 292 Check: 4504 Weight: 1.00 Name: ENSP00000362329/1-289 Len: 292 Check: 2884 Weight: 1.00 Name: bmy_10773T0/1-258 Len: 292 Check: 4326 Weight: 1.00 Name: BACU001936/1-289 Len: 292 Check: 4267 Weight: 1.00 Name: ENSBTAP00000010311/1-289 Len: 292 Check: 4111 Weight: 1.00 // 1 50 ENSTTRP00000006299/1-288 MSGFSSEERA APFTLEYRVF LKNERGQYIS PFHDIPIYAD KDVFHMVVEV ENSP00000362329/1-289 MSGFSTEERA APFSLEYRVF LKNEKGQYIS PFHDIPIYAD KDVFHMVVEV bmy_10773T0/1-258 MSGFS----- ---------- ---------- ---------N KDVFHMVVEV BACU001936/1-289 MSGFSSEERA APFTLEYRVF LKNEKGQYIS PFHDIPIYAD KDVFHMVVEV ENSBTAP00000010311/1-289 MSGFSSEERA APFTLEYRVF LKNEKGQYIS PFHDIPIYAD KEVFHMVVEV 51 100 ENSTTRP00000006299/1-288 PRWSNAKMEI ATKDPLNPIK QDVKKGKLRY VANLFPYKGY IWNYGAIPQT ENSP00000362329/1-289 PRWSNAKMEI ATKDPLNPIK QDVKKGKLRY VANLFPYKGY IWNYGAIPQT bmy_10773T0/1-258 PRWLNAKMEI ATKDPLNPIK QDVKKGKLCY VANLFPYKGY IWNYGAIPQT BACU001936/1-289 PRWSNAKMEI ATKDPLNPIK QDVKKGKLRY VANLFPYKGY IWNYGAIPQT ENSBTAP00000010311/1-289 PRWSNAKMEI ATKDPLNPIK QDVKKGKLRY VANLFPYKGY IWNYGAIPQT 101 150 ENSTTRP00000006299/1-288 WEDPRHNDEH TGCCGDNDPI DVCEIGSKXX XXXXXXXXXX XXXXXXXXXX ENSP00000362329/1-289 WEDPGHNDKH TGCCGDNDPI DVCEIGSKVC ARGEIIGVKV LGILAMIDEG bmy_10773T0/1-258 WEDPGHNDEH TGCCGDNDPI DVCEIGSKVC ARGEIIRVKV LGILAMIDEG BACU001936/1-289 WEDPRHNDEH TGCCGDNDPI DVCEIGSKVC ARGEIIRVKV LGILAMIDEG ENSBTAP00000010311/1-289 WEDPGHNDKH TGCCGDNDPI DVCEIGSKVC ARGEIIRVKV LGILAMIDEG 151 200 ENSTTRP00000006299/1-288 XXXXXXXXXX XXXXXXXXXX XINDVKRLKP GYLEATVDWF RRYKVPDGKP ENSP00000362329/1-289 ETDWKVIAIN VDDPDAANYN DINDVKRLKP GYLEATVDWF RRYKVPDGKP bmy_10773T0/1-258 ETDWKVIAIN VDDPDAANYN VINDVKRLKP GYLEATVDWF RRYKVPEGKP BACU001936/1-289 ETDWKVIAIN VDDPDAANYN DINDVKRLKP GYLEATVDWF RRYKVPDGKP ENSBTAP00000010311/1-289 ETDWKVIAIN VEDPDAANYN DINDVKRLKP GYLEATVDWF RRYKVPDGKP 201 250 ENSTTRP00000006299/1-288 ENQFAFDA-- -EFKDKDFAI DIIKSTHDYW RALVTKKTDG KGISCMNTTV ENSP00000362329/1-289 ENEFAFNA-- -EFKDKDFAI DIIKSTHDHW KALVTKKTNG KGISCMNTTL bmy_10773T0/1-258 ENQFAFNAEF KEFKDKDFAT DIIKSTHDYW RALVAKKTDG KGISCMNTTV BACU001936/1-289 ENQFAFNA-- -EFKDKDFAI DIIKSTHDYW RALVTKKTDG KGISCMNTTV ENSBTAP00000010311/1-289 ENEFAFNA-- -EFKDKNFAI DIIESTHDYW RALVTKKTDG KGISCMNTTV 251 300 ENSTTRP00000006299/1-288 FESPFQCDPD AAKAIVEALP PH-EPACTIP TDVDKWFHHQ KN ENSP00000362329/1-289 SESPFKCDPD AARAIVDALP PPCESACTVP TDVDKWFHHQ KN bmy_10773T0/1-258 FESPFQCDPD AAKAIVDALP PPCESACTIP TDVDKWFHHQ KN BACU001936/1-289 FESPFQCDPD AAKAIVEALP PPCESACTIP TDVDKWFHHQ KN ENSBTAP00000010311/1-289 SESPFQCDPD AAKAIVDALP PPCESACTIP TDVDKWFHHQ KN