KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:40:41 2014 Check: 00 .. Name: ENSP00000287936/1-888 Len: 946 Check: 6321 Weight: 1.00 Name: bmy_12862T0/1-938 Len: 946 Check: 3647 Weight: 1.00 Name: ENSBTAP00000010315/1-888 Len: 946 Check: 5644 Weight: 1.00 Name: BACU006185/1-884 Len: 946 Check: 9158 Weight: 1.00 Name: ENSTTRP00000009183/1-884 Len: 946 Check: 7305 Weight: 1.00 // 1 50 ENSP00000287936/1-888 ---------- ---------- ---------- ---------- MLSRLFRMHG bmy_12862T0/1-938 MTFLAEEVEG EGDNNRAEVL FGLILNARIH TTGSKDSSAT MLSRLFRMHG ENSBTAP00000010315/1-888 ---------- ---------- ---------- ---------- MLSRLFRMHG BACU006185/1-884 ---------- ---------- ---------- ---------- MLSRLFRMHG ENSTTRP00000009183/1-884 ---------- ---------- ---------- ---------- MLSRLFRMHD 51 100 ENSP00000287936/1-888 LFVASHPWEV IVGTVTLTIC MMSMNMFTGN NKICGWNYEC PKFEEDVLSS bmy_12862T0/1-938 LFVASHPWEV IVGTVTLTIC MMSMNMFTGN DKICGWNYEC PKFEEDVLSS ENSBTAP00000010315/1-888 LFVASHPWEV IVGTVTLTIC MMSMNMFTGN NKICGWNYEC PKLEEDVLSS BACU006185/1-884 LFVASHPWEV IVGTVTLTIC MMSMNMFTGN DKICGWNYEC PKFEEDVLSS ENSTTRP00000009183/1-884 LFVASHPWEV IVGTVTLTIC MMSMNMFTGN DKICGWNYEC PKFEEDVLSS 101 150 ENSP00000287936/1-888 DIIILTITRC IAILYIYFQF QNLRQLGSKY ILGIAGLFTI FSSFVFSTVV bmy_12862T0/1-938 DIIILTITRC IAILYIYFQF QNLRQLGSKY ILVRRSAISD LNNL---EKI ENSBTAP00000010315/1-888 DIIILTITRC IAILYIYFQF QNLRQLGSKY ILGIAGLFTI FSSFVFSTVV BACU006185/1-884 DIIILTITRC IAILYIYFQF QNLRQLGSKY ILGIAGLFTI FSSFVFSTVV ENSTTRP00000009183/1-884 DIIILTITRC IAILYIYFQF QNLRQLGSKY ILGIAGLFTI FSSFVFSTVV 151 200 ENSP00000287936/1-888 IHFLDKELTG LNEALPFFLL LIDLSRASTL AKFALSSNSQ DEVRENIARG bmy_12862T0/1-938 VLFLSEYCMG L-EALPFFLL LIDLSRASAL AKFALSSNSQ DEVRENIARG ENSBTAP00000010315/1-888 IHFLDKELTG LNEALPFFLL LVDLSRASAL AKFALSSNSQ DEVRENIARG BACU006185/1-884 IHFLDKELTG LNEALPFFLL LIDLSRASAL AKFALSSNSQ DEVRENIARG ENSTTRP00000009183/1-884 IHFLDKELTG LNEALPFFLL LIDLSRASAL AKFALSSNSQ DEVRENIARG 201 250 ENSP00000287936/1-888 MAILGPTFTL DALVECLVIG VGTMSGVRQL EIMCCFGCMS VLANYFVFMT bmy_12862T0/1-938 MAILGPTFTL DALVECLVIG VGTMSGVRQL EIMCCFGCMS VLANYFVFMT ENSBTAP00000010315/1-888 MAILGPTFTL DALVECLVIG VGTMSGVRQL EIMCCFGCMS VLANYFVFMT BACU006185/1-884 MAILGPTFTL DALVECLVIG VGTMSGVRQL EIMCCFGCMS VLANYFVFMT ENSTTRP00000009183/1-884 MAILGPTFTL DALVECLVIG VGTMSGVRQL EIMCCFGCMS VLANYFVFMT 251 300 ENSP00000287936/1-888 FFPACVSLVL ELSRESREGR PIWQLSHFAR VLEEEENKPN PVTQRVKMIM bmy_12862T0/1-938 FFPACVSLVL ELSRESREGR PIWQLSHFAR VLEEEENKPN PVTQRVKMIM ENSBTAP00000010315/1-888 FFPACVSLVL ELSRESREGR PIWQLSHFAR VLEEEENKPN PVTQRVKMIM BACU006185/1-884 FFPACVSLVL ELSRESREGR PIWQLSHFAR VLEEEENKPN PVTQRVKMIM ENSTTRP00000009183/1-884 FFPACVSLVL ELSRESREGR PIWQLSHFAR VLEEEENKPN PVTQRVKMIM 301 350 ENSP00000287936/1-888 SL-------- ---------- GLVLVHAHSR WIADPSPQNS TADTSKVSLG bmy_12862T0/1-938 PFNGAIALVS HIASLGLSFR GLVLVHAHSR WIADPSP--- -ADNSKVSLE ENSBTAP00000010315/1-888 SL-------- ---------- GLVLVHAHSR WIADPSPQNS TADNSKVSLG BACU006185/1-884 SL-------- ---------- GLVLVHAHSR WIADPSP--- -ADNSKVSLG ENSTTRP00000009183/1-884 SL-------- ---------- GLVLVHAHSR WIADPSP--- -ADNSKVSLG 351 400 ENSP00000287936/1-888 LDENVSKRIE PSVSLWQFYL SKMISMDIEQ VITLSLALLL AVKYIFFEQT bmy_12862T0/1-938 LDENVSKRIE PSVSLWQFYL SKMISMDIEQ VITLSLALLL AVKYIFFEQA ENSBTAP00000010315/1-888 LDENVSKRIE PSVSLWQFYL SKMISMDIEQ VITLSLALLL AVKYIFFEQA BACU006185/1-884 LDETVSKRIE PSVSLWQFYL SKMISMDIEQ VITLSLALLL AVKYIFFEQA ENSTTRP00000009183/1-884 LDENVSKRIE PSVSLWQFYL SKMISMDIEQ VITLSLALLL AVKYIFFEQA 401 450 ENSP00000287936/1-888 ETESTLSLKN PITSPVVTQK KVPDNCCRRE PMLVRNNQKC DSVEEETGIN bmy_12862T0/1-938 ETESTLSLKN PITSPVVTQK KVAGDCCRRD PIRVRNDQKF HAVEEEVRIN ENSBTAP00000010315/1-888 ETESTLSLKN PITSPVVTQK KITDDCCRRD PVLVRNDQKF HAMEEETRKN BACU006185/1-884 ETESTLSLKN PITSPVVTQK KVAGDCCRRD PILVRNDQKF HAVEEEVRIN ENSTTRP00000009183/1-884 ETESTLSLKN PITSPVVTQK KVADDCCRRD PVLVRNDQKF HAVEEEARIN 451 500 ENSP00000287936/1-888 RERKVEVIKP LVAETDTPNR ATFVVGNSSL LDTSSVLVTQ EPEIELPREP bmy_12862T0/1-938 RERKVEVIKP LVAETDTSNR ATFVVGNSSL LDTSLELETQ EPEIELPMEP ENSBTAP00000010315/1-888 RERKVEVIKP LLAENDTSHR ATFVVGNSSL LGTSLELETQ EPEMELPVEP BACU006185/1-884 RERKVEVIKP LVAETDTSNR ATFVVGNSSL LDTSLELETQ EPEIELPMEP ENSTTRP00000009183/1-884 RERKVEVIKP LVAETDTSNR ATFVVGNSSL LNTSLELETQ EPEIELPMEP 501 550 ENSP00000287936/1-888 RPNEECLQIL GNAEKGAKFL SDAEIIQLVN AKHIPAYKLE TLMETHERGV bmy_12862T0/1-938 RPNEECLQIL GNAEKGAKFL SDAEIIQLVN AKHIPAYKLE TLMETHERGV ENSBTAP00000010315/1-888 RPNEECLQIL ENAEKGAKFL SDAEIIQLVN AKHIPAYKLE TLMETHERGV BACU006185/1-884 RPNEECLQIL GNAEKGAKFL SDAEIIQLVN AKHIPAYKLE TLMETHERGV ENSTTRP00000009183/1-884 RPNEECLQIL GNAEKGAKFL SDAEIIQLVN AKHIPAYKLE TLMETYERGV 551 600 ENSP00000287936/1-888 SIRRQLLSKK LSEPSSLQYL PYRDYNYSLV MGACCENVIG YMPIPVGVAG bmy_12862T0/1-938 SIRRQLLSKK LPEPSSLQYL PYRDYNYSLV MGACCENVIG YMPIPVGVAG ENSBTAP00000010315/1-888 SIRRQLLSKK LPEPSSLQYL PYRDYNYSLV MGACCENVIG YMPIPVGVAG BACU006185/1-884 SIRRQLLSKK LPEPSSLQYL PYRDYNYSLV MGACCENVIG YMPIPVGVAG ENSTTRP00000009183/1-884 SIRRQLLSRK LPEPSSLQYL PYRDYNYSLV MGACCENVIG YMPIPVGVAG 601 650 ENSP00000287936/1-888 PLCLDEKEFQ VPMATTEGCL VASTNRGCRA IGLGGGASSR VLADGMTRGP bmy_12862T0/1-938 PLFLDGKEFQ VPMATTEGCL VASTNRGCRA IGLGGGASSR ILADGMTRGP ENSBTAP00000010315/1-888 PLCLDGKEFQ VPMATTEGCL VASTNRGCRA IGLGGGASSR VLADGMTRGP BACU006185/1-884 PLFLDGKEFQ VPMATTEGCL VASTNRGCRA IGLGGGASSR ILADGMTRGP ENSTTRP00000009183/1-884 PLCLDEKEFQ VPMATTEGCL VASTNRGCRA IGLGGGASSR ILADGITRGP 651 700 ENSP00000287936/1-888 VVRLPRACDS AEVKAWLETS EGFAVIKEAF DSTSRFARLQ KLHTSIAGRN bmy_12862T0/1-938 VVRLPRACDS AEVKAWLETP EGFTVIKEAF DSTSRFARLQ KLHMSVAGRN ENSBTAP00000010315/1-888 VVRFPRACDS AEVKAWLETP EGFTVIKEAF DSTSRFARLQ KLHMSVAGRN BACU006185/1-884 VVRLPRACDS AEVKAWLETP EGFTVIKEAF DSTSRFARLQ KLHMSVAGRN ENSTTRP00000009183/1-884 VVRFPRACDS AEVKAWLETP EGFTVIKEAF DSTSRFARLQ KLQMSVAGRN 701 750 ENSP00000287936/1-888 LYIRFQSRSG DAMGMNMISK GTEKALSKLH EYFPEMQILA VSGNYCTDKK bmy_12862T0/1-938 LYIRFQSRSG DAMGMNMISK GTEKALSKLH EYFPEMQILA VSGNYCTDKK ENSBTAP00000010315/1-888 LYIRFQSRSG DAMGMNMISK GTEKALSKLQ EYFPEMQILA VSGNYCTDKK BACU006185/1-884 LYIRFQSRSG DAMGMNMISK GTEKALSKLH EYFPEMQILA VSGNYCTDKK ENSTTRP00000009183/1-884 LYIRFQSKSG DAMGMNMISK GTEKALSKLH EYFPEMQILA VSGNYCTDKK 751 800 ENSP00000287936/1-888 PAAINWIEGR GKSVVCEAVI PAKVVREVLK TTTEAMIEVN INKNLVGSAM bmy_12862T0/1-938 PAAINWIEGR GKSVVCDAVI PAKVVREVLK TTTEAMIEVN INKNLVGSAM ENSBTAP00000010315/1-888 PAAINWIEGR GKSVVCEAVI PAKVVREVLK TTTEAMIEVN INKNLVGSAM BACU006185/1-884 PAAINWIEGR GKSVVCEAVI PAKVVREVLK TTTEAMIEVN INKNLVGSAM ENSTTRP00000009183/1-884 PAAINWIEGR GKSVVCEAII PAKVVREVLK TTTEAMIEVN INKNLVGSAM 801 850 ENSP00000287936/1-888 AGSIGGYNAH AANIVTAIYI ACGQDAAQNV GSSNCITLME ASGPTNEDLY bmy_12862T0/1-938 AGSIGGYNAH AANIVTAIYI ACGQDAAQNV SSSNCITLIE ASGPTNEDLY ENSBTAP00000010315/1-888 AGSIGGYNAH AANIVTAIYI ACGQDAAQNV GSSNCITLME ASGPTNEDLY BACU006185/1-884 AGSIGGYNAH AANIVTAVYI ACGQDAAQNV SSSNCITLIE ASGPTNEDLY ENSTTRP00000009183/1-884 AGSIGGFNAH AANIVTAIYI ACGQDAAQNV GSSNCITLIE ASGPTNEDLY 851 900 ENSP00000287936/1-888 ISCTMPSIEI GTVGGGTNLL PQQACLQMLG VQGACKDNPG ENARQLARIV bmy_12862T0/1-938 ISCTMPSIEI GTVGGGTNLL PQQACLQMLG VQGPCKDNPG ENARQLARIV ENSBTAP00000010315/1-888 ISCTMPSIEI GTVGGGTNLL PQQACLQMLG VQGACRDNPG ENARQLARIV BACU006185/1-884 ISCTMPSIEI GTVGGGTNLL PQQACLQMLG VQGPCKDNPG ENARQLARIV ENSTTRP00000009183/1-884 ISCTMPSIEI GTVGGGTNLL PQQACLQMLG VQGACKDNPG ENARQLARIV 901 950 ENSP00000287936/1-888 CGTVMAGELS LMAALAAGHL VKSHMIHNRS KINLQDLQGA CTKKTA bmy_12862T0/1-938 CGTVMAGELS LMAALAAGHL VRSHMIHNRS KVNLQDLQGT CTKKAA ENSBTAP00000010315/1-888 CGTVMAGELS LMAALAAGHL VRSHMIHNRS KINLQDLQGT CTKKAA BACU006185/1-884 CGTVMAGELS LMAALAAGHL VRSHMIHNRS KVNLQDLQGT CTKKAA ENSTTRP00000009183/1-884 CGTVMAGELS LLAALAAGHL VRSHMIHNRS KINLQDFQGT CTKKAA