KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:40:44 2014 Check: 00 .. Name: ENSTTRP00000011635/1-465 Len: 510 Check: 9655 Weight: 1.00 Name: bmy_19480T0/1-485 Len: 510 Check: 2948 Weight: 1.00 Name: ENSBTAP00000010324/1-441 Len: 510 Check: 4452 Weight: 1.00 Name: ENSP00000263360/1-441 Len: 510 Check: 4242 Weight: 1.00 Name: BACU002280/1-441 Len: 510 Check: 4242 Weight: 1.00 // 1 50 ENSTTRP00000011635/1-465 ---------- ---------- ---------- ---------- ----MSEREV bmy_19480T0/1-485 DSGGSGGGGG GSGNFAASSG RACLTAVWRR PRPRRQEPGG RRRNMSEREV ENSBTAP00000010324/1-441 ---------- ---------- ---------- ---------- ----MSEREV ENSP00000263360/1-441 ---------- ---------- ---------- ---------- ----MSEREV BACU002280/1-441 ---------- ---------- ---------- ---------- ----MSEREV 51 100 ENSTTRP00000011635/1-465 STAPAGTDMP AAKKQKLSSD ENSNPDLSGD ENDDAVSIES GTNTERPDTP bmy_19480T0/1-485 STAPAGTDMP AAKKQKLSSD ENSNPDLSGD ENDDAVSIES GTNTERPDTP ENSBTAP00000010324/1-441 STVPAGTDMP AAKKQKLSSD ENSNPDLSGD ENDDAVSIES GTNTERPDTP ENSP00000263360/1-441 STAPAGTDMP AAKKQKLSSD ENSNPDLSGD ENDDAVSIES GTNTERPDTP BACU002280/1-441 STAPAGTDMP AAKKQKLSSD ENSNPDLSGD ENDDAVSIES GTNTERPDTP 101 150 ENSTTRP00000011635/1-465 TNTPNAPGRK SWGKGKWKSK KCKYSFKCVN SLKEDHNQPL FGVQFNWHSK bmy_19480T0/1-485 TNTPNAPGRK SWGKGKWKSK KCKYSFKCVN SLKEDHNQPL FGVQFNWHSK ENSBTAP00000010324/1-441 TNTPNAPGRK SWGKGKWKSK KCKYSFKCVN SLKEDHNQPL FGVQFNWHSK ENSP00000263360/1-441 TNTPNAPGRK SWGKGKWKSK KCKYSFKCVN SLKEDHNQPL FGVQFNWHSK BACU002280/1-441 TNTPNAPGRK SWGKGKWKSK KCKYSFKCVN SLKEDHNQPL FGVQFNWHSK 151 200 ENSTTRP00000011635/1-465 EGDPLVFATV GSNRVTLYEC HSQGEIRLLQ SYVDADADEN -YTCAWTYDS bmy_19480T0/1-485 EGDPLVFATV GSNRVTLYEC HSQGEIRLLQ SYVDADADEN FYTCAWTYDS ENSBTAP00000010324/1-441 EGDPLVFATV GSNRVTLYEC HSQGEIRLLQ SYVDADADEN FYTCAWTYDS ENSP00000263360/1-441 EGDPLVFATV GSNRVTLYEC HSQGEIRLLQ SYVDADADEN FYTCAWTYDS BACU002280/1-441 EGDPLVFATV GSNRVTLYEC HSQGEIRLLQ SYVDADADEN FYTCAWTYDS 201 250 ENSTTRP00000011635/1-465 NTSHPLLAVA GSRGIIRIIN PITMQCIKHY VGHGNAINEL KFHPRDPNLL bmy_19480T0/1-485 NTSHPLLAVA GSRGIIRIIN PITMQCIKHY VGHGNAINEL KFHPRDPNLL ENSBTAP00000010324/1-441 NTSHPLLAVA GSRGIIRIIN PITMQCIKHY VGHGNAINEL KFHPRDPNLL ENSP00000263360/1-441 NTSHPLLAVA GSRGIIRIIN PITMQCIKHY VGHGNAINEL KFHPRDPNLL BACU002280/1-441 NTSHPLLAVA GSRGIIRIIN PITMQCIKHY VGHGNAINEL KFHPRDPNLL 251 300 ENSTTRP00000011635/1-465 LSVSKXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXDYDL LGEKIMSCGM bmy_19480T0/1-485 LSVSKDHALR LWNIQTDTLV AIFGGVEGHR DEVLSADYDL LGEKIMSCGM ENSBTAP00000010324/1-441 LSVSKDHALR LWNIQTDTLV AIFGGVEGHR DEVLSADYDL LGEKIMSCGM ENSP00000263360/1-441 LSVSKDHALR LWNIQTDTLV AIFGGVEGHR DEVLSADYDL LGEKIMSCGM BACU002280/1-441 LSVSKDHALR LWNIQTDTLV AIFGGVEGHR DEVLSADYDL LGEKIMSCGM 301 350 ENSTTRP00000011635/1-465 DHSLKLWRIN SKRMMNAIKE SYDYNPNKTN RPFISQKIHF PDFSTRDIHR bmy_19480T0/1-485 DHSLKLWRIN SKRMMNAIKE SYDYNPNKTN RPFISQKIHF PDFSTRDIHR ENSBTAP00000010324/1-441 DHSLKLWRIN SKRMMNAIKE SYDYNPNKTN RPFISQKIHF PDFSTRDIHR ENSP00000263360/1-441 DHSLKLWRIN SKRMMNAIKE SYDYNPNKTN RPFISQKIHF PDFSTRDIHR BACU002280/1-441 DHSLKLWRIN SKRMMNAIKE SYDYNPNKTN RPFISQKIHF PDFSTRDIHR 351 400 ENSTTRP00000011635/1-465 NYVDCVRWLG DLILSKSGRA ILHSHQQCMK DPVSSNLRRH LSCENAIVCW bmy_19480T0/1-485 NYVDCVRWLG DLILSK---- ---------- ---------- -SCENAIVCW ENSBTAP00000010324/1-441 NYVDCVRWLG DLILSK---- ---------- ---------- -SCENAIVCW ENSP00000263360/1-441 NYVDCVRWLG DLILSK---- ---------- ---------- -SCENAIVCW BACU002280/1-441 NYVDCVRWLG DLILSK---- ---------- ---------- -SCENAIVCW 401 450 ENSTTRP00000011635/1-465 KPGKMEDDID KIKPSESNVT ILGRFDYSQC DIWYMRFSMD FWQKXXXXXX bmy_19480T0/1-485 KPGKMEDDID KIKPSESNVT ILGRFDYSQC DIWYMRFSMD FWQKMLALGN ENSBTAP00000010324/1-441 KPGKMEDDID KIKPSESNVT ILGRFDYSQC DIWYMRFSMD FWQKMLALGN ENSP00000263360/1-441 KPGKMEDDID KIKPSESNVT ILGRFDYSQC DIWYMRFSMD FWQKMLALGN BACU002280/1-441 KPGKMEDDID KIKPSESNVT ILGRFDYSQC DIWYMRFSMD FWQKMLALGN 451 500 ENSTTRP00000011635/1-465 XXXXXXXXXX XXXXXXXXXC TTLTHHKCGA AIRQTSFSRD SSILIAVCDD bmy_19480T0/1-485 QVGKLYVWDL EVEDPHKAKC TTLTHHKCGA AIRQTSFSRD SSILIAVCDD ENSBTAP00000010324/1-441 QVGKLYVWDL EVEDPHKAKC TTLTHHKCGA AIRQTSFSRD SSILIAVCDD ENSP00000263360/1-441 QVGKLYVWDL EVEDPHKAKC TTLTHHKCGA AIRQTSFSRD SSILIAVCDD BACU002280/1-441 QVGKLYVWDL EVEDPHKAKC TTLTHHKCGA AIRQTSFSRD SSILIAVCDD 501 550 ENSTTRP00000011635/1-465 ASIWRWDRLR bmy_19480T0/1-485 ASIWRWDRLR ENSBTAP00000010324/1-441 ASIWRWDRLR ENSP00000263360/1-441 ASIWRWDRLR BACU002280/1-441 ASIWRWDRLR