KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 16:40:44 2014  Check: 00 ..

 Name: ENSP00000375795/1-207     Len:    207  Check:  2453  Weight:  1.00
 Name: ENSBTAP00000010325/1-187  Len:    207  Check:  853  Weight:  1.00
 Name: ENSTTRP00000011487/1-199  Len:    207  Check:  9900  Weight:  1.00
 Name: bmy_02362T0/1-183         Len:    207  Check:  1239  Weight:  1.00
 Name: BACU019902/1-187          Len:    207  Check:  7430  Weight:  1.00

//


                          1                                                   50
ENSP00000375795/1-207     MNFQQRLQSL WTLASRPFCP PLLATASQMQ MVVLPCLGFT LLLWSQVSGA 
ENSBTAP00000010325/1-187  ---------- ---------P SLLQMNSSMH VAALPCLSLM LLLWSPGPWV 
ENSTTRP00000011487/1-199  MNLQDRLQRP --------RL PLLQMGSPVR MAALPCLSLI LLLWSQGPGV 
bmy_02362T0/1-183         ---------- ---------- ----MGSPVH MAALPCLSLI LLFWSQGPGV 
BACU019902/1-187          ---------- ---------- PLLQMGSPVH MAALPCLSLI LLFWSRGPGV 


                          51                                                 100
ENSP00000375795/1-207     QGQEFHFGPC QVKGVVPQKL WEAFWAVKDT MQAQDNITSA RLLQQEVLQN 
ENSBTAP00000010325/1-187  RGQEFQFGPC RVEGVVLQKL WQAFWAMKDI VQAQDNIMSV RLLRKEVLQN 
ENSTTRP00000011487/1-199  QGQEFQFGPC QVEGVVLQEL WEAFQAMKDI VQAQDNITSV QLLRKEVLQN 
bmy_02362T0/1-183         QGQEFQFGPC QVEGVVLQEL WEAFQAMKDI VQAQDNVTSA QLLRKEVLHN 
BACU019902/1-187          QGQEFQFGPC QVEGVVLQEL WEAFQAMKDI VQAQDNITSV QLLRKEVLQN 


                          101                                                150
ENSP00000375795/1-207     VSDAESCYLV HTLLEFYLKT VFKNYHNRTV EVRTLKSFST LANNFVLIVS 
ENSBTAP00000010325/1-187  VSETESCHLI HALLRFYVNT VFKNYHDKAV EFGILKPFST LANNFFVIVS 
ENSTTRP00000011487/1-199  VSEAESCYLI HALLEFYLNT VFKNYHDKAV EFRILKSFST LANNFIVIVS 
bmy_02362T0/1-183         VSEAESCHLI HALLKFYLNT VFKNYHDKAV EFRILKSFST LANNFIVIVS 
BACU019902/1-187          VSEAESCHLI HALLKFYLNT VFKNYRDKAV EFRILKSFST LANNFIVIVS 


                          151                                                200
ENSP00000375795/1-207     QLQPSQENEM FSIRDSAHRR FLLFRRAFKQ LDVEAALTKA LGEVDILLTW 
ENSBTAP00000010325/1-187  KLQASQEK-M FSARKSARRR FLLFYQAFKQ LDREAAVTKA FGEMDILLSW 
ENSTTRP00000011487/1-199  KLQPSQEKEM FSISESARRR FLLFQRAFKQ LDREAAVTKA FGEVDILLTW 
bmy_02362T0/1-183         KLQPSQEKEM FSISESARRR FLMFQRAFKQ LDREAAVTKA FGEVDILLTW 
BACU019902/1-187          KLQASQEKEM FSISESARRR FLLFQRAFKQ LDREAAVTKA FGEVDILLTW 


                          201                                                250
ENSP00000375795/1-207     MQKFYKL 
ENSBTAP00000010325/1-187  MEKFYQL 
ENSTTRP00000011487/1-199  MEKFYQI 
bmy_02362T0/1-183         MENFYQL 
BACU019902/1-187          MENFYQL