KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:40:46 2014 Check: 00 .. Name: ENSP00000402219/1-423 Len: 431 Check: 7952 Weight: 1.00 Name: ENSTTRP00000009507/1-385 Len: 431 Check: 6630 Weight: 1.00 Name: ENSBTAP00000010335/1-382 Len: 431 Check: 5479 Weight: 1.00 Name: bmy_12821T0/1-367 Len: 431 Check: 2685 Weight: 1.00 Name: BACU017190/1-378 Len: 431 Check: 3035 Weight: 1.00 // 1 50 ENSP00000402219/1-423 MVFAFWKVFL ILSCLAGQVS VVQVTIPDGF VNVTVGSNVT LICIYTTTVA ENSTTRP00000009507/1-385 MVFTFWKVFL ILSCLAGPVR GVQVTIPDDF VNVTVGSNVT LICTYTTTVA ENSBTAP00000010335/1-382 MGLTFWKVFL ILNCLAGQVN GVQVTIPDSF VNVTVGSDVT LICTYATTVA bmy_12821T0/1-367 MII------- ----FSGPVS GVQVTIPDNF VNVTVGSDVT LICTYTTTVA BACU017190/1-378 MVFTYWKVFL ILNCLAGPVS GVQVTIPDNF VNVTVGSDVT LICTYTTTVA 51 100 ENSP00000402219/1-423 SREQLSIQWS FFHKKEMEPI SHSSCLSTEG MEEKAVSQCL KMTHARDARG ENSTTRP00000009507/1-385 SLDKLSIQWT FFHKE-SQPV S--------- ---------- ---------- ENSBTAP00000010335/1-382 SLNKLSIQWT FFHKEASQPV S--------- ---------- ---------- bmy_12821T0/1-367 SLDKLSIQWT FFHKE-SQPV S--------- ---------- ---------- BACU017190/1-378 SLDNLSIQWT FFHKE-SQPV S--------- ---------- ---------- 101 150 ENSP00000402219/1-423 RCSWTSEIYF SQGGQAVAIG QFKDRITGSN DPGNASITIS HMQPADSGIY ENSTTRP00000009507/1-385 -------IYY SEGGQATAIG QFKDRIVGSN APGNASITIA HMQPADSGIY ENSBTAP00000010335/1-382 -------IYY SEGGQATAIG KFKDRIVGSN TSGNASITIS HMQPEDSGIY bmy_12821T0/1-367 -------IYY SEGGRATAIG QFKDRIVGSN APGNASITIS HMQPADSGIY BACU017190/1-378 -------IYY SEGGRATAIG QFKDRIVGSN APGNASITIS HMQPADSGIY 151 200 ENSP00000402219/1-423 ICDVNNPPDF LGQNQGILNV SVLVKPSKPL CSVQGRPETG HTISLSCLSA ENSTTRP00000009507/1-385 VCDVNNPPDF FGKNQGTLNV SVLVKPSKPF CSIQGIPETG HPVSLTCLSV ENSBTAP00000010335/1-382 ICDVNNPPDF FGKNQGTISV SVLVKPSKPF CSIQGIAETG HPISLTCLSV bmy_12821T0/1-367 VCDVNNPPDF FGKNQGTLNV SVLVKPSKPF CSIQGIPEPG YPISLTCLSV BACU017190/1-378 VCDVNNPPDF FGKNQGTLNV SVLVKPSKPF CSIQGIPEPG HPISLTCLSV 201 250 ENSP00000402219/1-423 LGTPSPVYYW HKLEGRDIVP VKENFNPTTG ILVIGNLTNF EQGYYQCTAI ENSTTRP00000009507/1-385 LGTPSPVYYW YKLEGRDIVP VKETFNPATG ILFIGNLTNF VQGYYQCTAI ENSBTAP00000010335/1-382 LGTPSPVYYW YKLEGRNIVP VKENFNPATG ILFIGNLTTF EQGYYQCTAI bmy_12821T0/1-367 LGTPSPVYYW YKLEGRDIVP VKESFNPATG ILFIGNLTNF VQGYYQCTAI BACU017190/1-378 LGTPSPVYYW YKLEGRDIVP VKESFNPATG ILFIGNLTNF VQGYYQCTAI 251 300 ENSP00000402219/1-423 NRLGNSSCEI DLTSSHPEVG IIVGALIGSL VGAAIIISVV CFARNKAKAK ENSTTRP00000009507/1-385 NNLGNSSCEI DLTSSHPEVG IIVGAVVGTL IGAAIIFSVV CFARNKAKEK ENSBTAP00000010335/1-382 NILGNSSCEI DLTTPYPGIG IIVGAFVGTL IGVIIIISVV WFVRRKVKAK bmy_12821T0/1-367 NNLGNSSCEI DLTSSHPEVG IIVGALVGTL VGAAIIFSVV CFARNKAKAK BACU017190/1-378 NNLGNSSCEI DLTSSHPEVG IIVGALVGTL VGVAIIFSVV CFARNKAKAK 301 350 ENSP00000402219/1-423 AKE--RNSKT IAELEPMTKI NPRGESEAMP REDATQLEVT LPSSIHETGP ENSTTRP00000009507/1-385 GKKRKRNSKP TTELQPMTNV NQSAECETIP DEDIIQIEAT XXXXXXXXXX ENSBTAP00000010335/1-382 GKERKRNSKT TTELEPMTKI NQRTEGETMP REDAIQLEAT LPSSTHETEP bmy_12821T0/1-367 RKERKRNSKS TTELELMTKI NQSTECETIP DEDIIQIEAT LPPSIHEAEP BACU017190/1-378 REERKRNSKP TTELELMTKI NQSTECETIP DEDIIQVEPT LPPPIHEAEP 351 400 ENSP00000402219/1-423 DTIQEPDYEP KPTQEPAPEP APGSEPMAVP DLDIELELEP ETQSELEPEP ENSTTRP00000009507/1-385 XXXXXXXXXX XXXXXXXXXX X--XXXXXXX ----XXXXXX XXXXXXXXXX ENSBTAP00000010335/1-382 NATLGPDHEP IPEPEPALQP T--VEPPSGP ----ELVPMS ELEIQLEPEP bmy_12821T0/1-367 NTTLGPDHKP IPKPEPALQP A--LEPASGP ----ELARAP ELEIKLE--- BACU017190/1-378 NTALWPDHKP IPEPEPALQP A--LETASGP ----ELARAP ELEIKLD--- 401 450 ENSP00000402219/1-423 E------PEP ESEPGVVVEP LSEDEKGVVK A ENSTTRP00000009507/1-385 XXXXXXEPQQ EPEPSIVE-- FCDKGEGVIT - ENSBTAP00000010335/1-382 A------PQQ EPEPLIVDEP FCDEEK-VIK P bmy_12821T0/1-367 -------PQQ EPEPSIVVEP SCDEGKGVIK T BACU017190/1-378 -------PQQ EPEPSIVVEP SCDEGKGVIK T