KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:40:53 2014 Check: 00 .. Name: ENSP00000412461/1-714 Len: 735 Check: 1188 Weight: 1.00 Name: ENSBTAP00000010363/1-599 Len: 735 Check: 7562 Weight: 1.00 Name: BACU007611/1-722 Len: 735 Check: 2562 Weight: 1.00 Name: bmy_04265T0/1-717 Len: 735 Check: 317 Weight: 1.00 Name: ENSTTRP00000012953/1-705 Len: 735 Check: 3935 Weight: 1.00 // 1 50 ENSP00000412461/1-714 MLSPKIRQAR RARSKSLVMG EQSRSPGRMP CPHRLGPVLK AGWLKKQRSI ENSBTAP00000010363/1-599 ---------- ---------- ---------- ---------- ---------- BACU007611/1-722 MLSPKMRQAR RARSKSLVMG EQSRSPGQTP CPRRLGPVLK AGWLKKQRSI bmy_04265T0/1-717 ---------- --------MG EQSRSPGQPP CPRRLGPVLK AGWLKKQRSI ENSTTRP00000012953/1-705 LVCSRAGQGR GARSKSLVMG EQSRSPGQPP CPRRLGPVLK AGWLKKQRSI 51 100 ENSP00000412461/1-714 MKNWQQRWFV LRGDQLFYYK DKDEIKPQGF ISLQGTQVTE LPPGPEDPGK ENSBTAP00000010363/1-599 ---------- ---------- ---------- ---------- ---------- BACU007611/1-722 MKNWQQRWFV LRGDQLFYYK DKDESKPQGF ISLQGTQVTE LLPGPEDPGK bmy_04265T0/1-717 MKNWQQRWFV LRGDQLFYYK DKDESKPQGF ISLQGTQVTE LLPGPEDPGK ENSTTRP00000012953/1-705 MKNWQQRWFV LRGDQLFYYK DKDESKPQGF ISLQGTQVTE LLPGPEDPGK 101 150 ENSP00000412461/1-714 HLFEISPGGA GEREKVPANP EALLLMASSQ RDMEDWVQAI RRVIWAPLGG ENSBTAP00000010363/1-599 -------GGA GEREKVPANP EALLLMASSQ RDMEDWVQAI RRVIWAPFGR BACU007611/1-722 HLFEISPGGA GEREKVPANP EALLLMASSQ RDMEDWVQAI RRVIWAPFGG bmy_04265T0/1-717 HLFEISPGGA GEREKVPANP EALLLMASSQ RDMEDWVQAI RRVIWAPFGG ENSTTRP00000012953/1-705 HLFEISPGGA GEREKVPANP EALLLMASSQ RDMEDWVQAI RRVIWAPFGG 151 200 ENSP00000412461/1-714 GTARRSHAHP LEPLP----- --------PG IFGQRLEETV HHERKYGPRL ENSBTAP00000010363/1-599 ---------- ---------- ---------G IFGQRLEDTV HHERKYGPRL BACU007611/1-722 GTARSAHAHP LEPLP----- --------PG VFGQRLEDTV HHERKYGPRL bmy_04265T0/1-717 APPALCCPQH PPPQPSRLAE GVTSSSLCPG VFGQRLEDTV HHERKYGPRL ENSTTRP00000012953/1-705 ---------- ---------- ---------G VFGQRLEDTV HHERKYGPRL 201 250 ENSP00000412461/1-714 APLLVEQCVD FIRERGLTEE GLFRMPGQAN LVRDLQDSFD CGEKPLFDST ENSBTAP00000010363/1-599 APLLVEQCVD FIRERGLSEE GLFRMPGQAN LVRDLQDSFD CGEKPRFDST BACU007611/1-722 APLLVEQCVD FIRERGLTEE GLFRMPGQAN LVRDLQDSFD CGEKPLFDST bmy_04265T0/1-717 APLLVEQCVD FIRERGLTEE GLFRMPGQAN LVRDLQDSFD CGEKPLFDST ENSTTRP00000012953/1-705 APLLVEQCVD FIRERGLTEE GLFRMPGQAN LVRDLQDSFD CGEKPLFDST 251 300 ENSP00000412461/1-714 TDVHTVASLL KLYLRELPEP VVPFARYEDF LSCAQLLTKD EGEGTLELAK ENSBTAP00000010363/1-599 TDVHTVASLL KLYLRELPEP VVPFARYEDF LNCAQLLTKD EGEGTLELAK BACU007611/1-722 TDVHTVASLL KLYLRELPEP VVPFARYEDF LSCAQLLTKD EGEGTLELAK bmy_04265T0/1-717 TDVHTVASLL KLYLRELPEP VVPFARYEDF LSCAQLLTKD EGEGTLELAK ENSTTRP00000012953/1-705 TDVHTVASLL KLYLRELPEP VVPFARYEDF LSCAQLLTKD EGEGTLELAK 301 350 ENSP00000412461/1-714 QVSNLPQANY NLLRYICKFL DEVQAYSNVN KMSVQNLATV FGPNILRPQV ENSBTAP00000010363/1-599 QVSSLPLVNY NLLRYICKFL DEVQSHSDVN KMSVQNLATV FGPNILRPQR BACU007611/1-722 QVSSLPLVNY NLLRYICKFL DEVQSHSDVN KMSVQNLATV FGPNILRPQI bmy_04265T0/1-717 QVSSLPLVNY NLLRYICKFL DEVQSHSDVN KMSVQNLATV FGPNILRPQI ENSTTRP00000012953/1-705 QVSSLPLVNY NLLRYICKFL DEVQSHSDVN KMSVQNLATV FGPNILRPQI 351 400 ENSP00000412461/1-714 EDPVTIMEGT SLVQHLMTVL IRKHSQLFTA PVPEGPTSPR GGLQCAVGWG ENSBTAP00000010363/1-599 EDPVTIMEGT SLVQHLMTIL IRKHSQLFTS RTTEGPASPR GGPPCTVGWG BACU007611/1-722 EDPVTIMEGT SLVQHLMTVL IRKHSQLFTS RTTEGPASPR GSPPCTVGWG bmy_04265T0/1-717 EDPVTIMEGT SLVQHLMTVL IRKHSQLFTS RTTEGPASPR GSPPCTVGWG ENSTTRP00000012953/1-705 EDPVTIMEGT SLVQHLMTVL IRRHSQLFTS RTTEAPASPR GSPPCTVGWG 401 450 ENSP00000412461/1-714 SEEVTRDSQG EPG---GPGL PAHRTSSLDG AAVAVLSRTA PTGPGSRCS- ENSBTAP00000010363/1-599 SEEVTRDDQA EPGSPSAPCL PSHRTSSLDG AAVAALSRTS PTGLGSRCSP BACU007611/1-722 SEEVTRDSRA EPGSPSAPGL PSHRTSSLDG AAVAAFSRTS STGLGSRSSP bmy_04265T0/1-717 SEEVTRDSRA EPGSPSAPGL PSHRTSSLDG AAVAAFSRTS STGLGSRSSP ENSTTRP00000012953/1-705 SEEVTRDSQA EPGSPSAPGL PSHRASSLDG AAVAAFSRTS PTGLGSRSSP 451 500 ENSP00000412461/1-714 ----PGKKVQ TLPSWKSSFR QPRSLSGSPK GGGSSLEVPI ISSGGNWLMN ENSBTAP00000010363/1-599 AATSPGKKVQ TLPNWRSSFR QSGSRSGSPK VGTSSLEVPI ISSGGNWLMN BACU007611/1-722 AATSPGKKVQ TLPNWRSSFR QSGSRSGSPK VGTSSLEVPI ISSGGNWLMN bmy_04265T0/1-717 AATSPGKKVQ TLPNWRSSFR QSGSRSGSPK VGTSSLEVPI ISSGGNWLMN ENSTTRP00000012953/1-705 AAT-PGKKVQ TLPNWRSSFR QSGSRSGSPK VGTSSLEVPI ISSGGNWLMN 501 550 ENSP00000412461/1-714 GLSSLRGHRR ASSGDRLKDS GSVQRLSTYD NVPAPGLVPG IPSVASMAWS ENSBTAP00000010363/1-599 GLSSLRGHRR ASSGDRLKDS GSEQRLSTYD NVPPQSCFPS TPSVASLPWS BACU007611/1-722 GLSSLRGHRR ASSGDRFKDS GSEQRLSTYD NVPLPSPFPS TPSVASMPWS bmy_04265T0/1-717 GLSSLRGHRR ASSGDRFKDS GSEQRLSTYD NVPLPSPFPS TPSVASMPWS ENSTTRP00000012953/1-705 GLSSLRGHRR ASSGDRFKDS GSEQRLSTYD NVPLPSPFPS TPSVASMPWS 551 600 ENSP00000412461/1-714 GASSSESSVG GSLSSCTACR ASDSSARSSL HTDWALEPSP LPSSSEDPKS ENSBTAP00000010363/1-599 GASSCEASAQ GSVSSCTACR ASDSSTCSSL HIEGALEPSP VLSSSEERRS BACU007611/1-722 GASSGEASAR GSVSSCTACR ASDSSACSSL HTEGALEPSP VPSSSEECRS bmy_04265T0/1-717 GASSCEASAR GSVSSCTACR ASDSSACSSL HTEGALEPSP VPSSSEECRS ENSTTRP00000012953/1-705 GASSCEASAR GSVSSCTACR ASDSSACSSL HTEGALEPSP VPSSSEECRS 601 650 ENSP00000412461/1-714 LDLDHSMDEA GAGASNSEPS EPDSPTREHA RRSEALQGLV TELRAELCRQ ENSBTAP00000010363/1-599 LDLDHGLDGV GACISSSEPS DPGSPAQDHA RRTEVLQGLV TELRAELCRQ BACU007611/1-722 PDLDHGLDRV GACISSSEPS DPGSPTQDLA HRTEALQGLV TELRAELCRQ bmy_04265T0/1-717 PDLDHGLDRV GACISSSEPS DPGSPTQDFA HRTEALQGLV TELRAELCRQ ENSTTRP00000012953/1-705 PDLDHGLDRV GACISSSEPS DPGSPTQDLA HRTETLQGLV TELRAELCRQ 651 700 ENSP00000412461/1-714 RTEYERSVKR IEEGSADLRK RMSRLEEELD QEKKKYIMLE IKLRNSERAR ENSBTAP00000010363/1-599 RTEYETNVKR LEEGSADLRK RMSRLEEELD QEKKKYTMLE IKLRNSERAR BACU007611/1-722 RTEYEMSVKR LEEGSADLRK RMSRLEEELD QEKKKYTMLE IKLRNSERAR bmy_04265T0/1-717 RTEYETSVKR LEEGSADLRK RMSRLEEELD QEKKKYTMLE IKLRNSERAR ENSTTRP00000012953/1-705 RTEYETSVKR LEEGSADLRK RMLQLEEQLD QEKKKYTMLE IKLRNSERAR 701 750 ENSP00000412461/1-714 EDAERRNQLL QREMEEFFST LGSLTVGAKG ARAPK ENSBTAP00000010363/1-599 EDAEKRNQLL QREMEEFFST LGSLTVGAKG ARALK BACU007611/1-722 EDAEKRNQLL QKEMEEFFST LGSLTAGAKG ARAPK bmy_04265T0/1-717 EDAEKRNQLL QKEMEEFFST LGSLTAGATG ARAPK ENSTTRP00000012953/1-705 EDAEKRNQLL QKEMEEFFST LGSLTAGAKG ARAPK