KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:40:53 2014 Check: 00 ..
Name: ENSP00000412461/1-714 Len: 735 Check: 1188 Weight: 1.00
Name: ENSBTAP00000010363/1-599 Len: 735 Check: 7562 Weight: 1.00
Name: BACU007611/1-722 Len: 735 Check: 2562 Weight: 1.00
Name: bmy_04265T0/1-717 Len: 735 Check: 317 Weight: 1.00
Name: ENSTTRP00000012953/1-705 Len: 735 Check: 3935 Weight: 1.00
//
1 50
ENSP00000412461/1-714 MLSPKIRQAR RARSKSLVMG EQSRSPGRMP CPHRLGPVLK AGWLKKQRSI
ENSBTAP00000010363/1-599 ---------- ---------- ---------- ---------- ----------
BACU007611/1-722 MLSPKMRQAR RARSKSLVMG EQSRSPGQTP CPRRLGPVLK AGWLKKQRSI
bmy_04265T0/1-717 ---------- --------MG EQSRSPGQPP CPRRLGPVLK AGWLKKQRSI
ENSTTRP00000012953/1-705 LVCSRAGQGR GARSKSLVMG EQSRSPGQPP CPRRLGPVLK AGWLKKQRSI
51 100
ENSP00000412461/1-714 MKNWQQRWFV LRGDQLFYYK DKDEIKPQGF ISLQGTQVTE LPPGPEDPGK
ENSBTAP00000010363/1-599 ---------- ---------- ---------- ---------- ----------
BACU007611/1-722 MKNWQQRWFV LRGDQLFYYK DKDESKPQGF ISLQGTQVTE LLPGPEDPGK
bmy_04265T0/1-717 MKNWQQRWFV LRGDQLFYYK DKDESKPQGF ISLQGTQVTE LLPGPEDPGK
ENSTTRP00000012953/1-705 MKNWQQRWFV LRGDQLFYYK DKDESKPQGF ISLQGTQVTE LLPGPEDPGK
101 150
ENSP00000412461/1-714 HLFEISPGGA GEREKVPANP EALLLMASSQ RDMEDWVQAI RRVIWAPLGG
ENSBTAP00000010363/1-599 -------GGA GEREKVPANP EALLLMASSQ RDMEDWVQAI RRVIWAPFGR
BACU007611/1-722 HLFEISPGGA GEREKVPANP EALLLMASSQ RDMEDWVQAI RRVIWAPFGG
bmy_04265T0/1-717 HLFEISPGGA GEREKVPANP EALLLMASSQ RDMEDWVQAI RRVIWAPFGG
ENSTTRP00000012953/1-705 HLFEISPGGA GEREKVPANP EALLLMASSQ RDMEDWVQAI RRVIWAPFGG
151 200
ENSP00000412461/1-714 GTARRSHAHP LEPLP----- --------PG IFGQRLEETV HHERKYGPRL
ENSBTAP00000010363/1-599 ---------- ---------- ---------G IFGQRLEDTV HHERKYGPRL
BACU007611/1-722 GTARSAHAHP LEPLP----- --------PG VFGQRLEDTV HHERKYGPRL
bmy_04265T0/1-717 APPALCCPQH PPPQPSRLAE GVTSSSLCPG VFGQRLEDTV HHERKYGPRL
ENSTTRP00000012953/1-705 ---------- ---------- ---------G VFGQRLEDTV HHERKYGPRL
201 250
ENSP00000412461/1-714 APLLVEQCVD FIRERGLTEE GLFRMPGQAN LVRDLQDSFD CGEKPLFDST
ENSBTAP00000010363/1-599 APLLVEQCVD FIRERGLSEE GLFRMPGQAN LVRDLQDSFD CGEKPRFDST
BACU007611/1-722 APLLVEQCVD FIRERGLTEE GLFRMPGQAN LVRDLQDSFD CGEKPLFDST
bmy_04265T0/1-717 APLLVEQCVD FIRERGLTEE GLFRMPGQAN LVRDLQDSFD CGEKPLFDST
ENSTTRP00000012953/1-705 APLLVEQCVD FIRERGLTEE GLFRMPGQAN LVRDLQDSFD CGEKPLFDST
251 300
ENSP00000412461/1-714 TDVHTVASLL KLYLRELPEP VVPFARYEDF LSCAQLLTKD EGEGTLELAK
ENSBTAP00000010363/1-599 TDVHTVASLL KLYLRELPEP VVPFARYEDF LNCAQLLTKD EGEGTLELAK
BACU007611/1-722 TDVHTVASLL KLYLRELPEP VVPFARYEDF LSCAQLLTKD EGEGTLELAK
bmy_04265T0/1-717 TDVHTVASLL KLYLRELPEP VVPFARYEDF LSCAQLLTKD EGEGTLELAK
ENSTTRP00000012953/1-705 TDVHTVASLL KLYLRELPEP VVPFARYEDF LSCAQLLTKD EGEGTLELAK
301 350
ENSP00000412461/1-714 QVSNLPQANY NLLRYICKFL DEVQAYSNVN KMSVQNLATV FGPNILRPQV
ENSBTAP00000010363/1-599 QVSSLPLVNY NLLRYICKFL DEVQSHSDVN KMSVQNLATV FGPNILRPQR
BACU007611/1-722 QVSSLPLVNY NLLRYICKFL DEVQSHSDVN KMSVQNLATV FGPNILRPQI
bmy_04265T0/1-717 QVSSLPLVNY NLLRYICKFL DEVQSHSDVN KMSVQNLATV FGPNILRPQI
ENSTTRP00000012953/1-705 QVSSLPLVNY NLLRYICKFL DEVQSHSDVN KMSVQNLATV FGPNILRPQI
351 400
ENSP00000412461/1-714 EDPVTIMEGT SLVQHLMTVL IRKHSQLFTA PVPEGPTSPR GGLQCAVGWG
ENSBTAP00000010363/1-599 EDPVTIMEGT SLVQHLMTIL IRKHSQLFTS RTTEGPASPR GGPPCTVGWG
BACU007611/1-722 EDPVTIMEGT SLVQHLMTVL IRKHSQLFTS RTTEGPASPR GSPPCTVGWG
bmy_04265T0/1-717 EDPVTIMEGT SLVQHLMTVL IRKHSQLFTS RTTEGPASPR GSPPCTVGWG
ENSTTRP00000012953/1-705 EDPVTIMEGT SLVQHLMTVL IRRHSQLFTS RTTEAPASPR GSPPCTVGWG
401 450
ENSP00000412461/1-714 SEEVTRDSQG EPG---GPGL PAHRTSSLDG AAVAVLSRTA PTGPGSRCS-
ENSBTAP00000010363/1-599 SEEVTRDDQA EPGSPSAPCL PSHRTSSLDG AAVAALSRTS PTGLGSRCSP
BACU007611/1-722 SEEVTRDSRA EPGSPSAPGL PSHRTSSLDG AAVAAFSRTS STGLGSRSSP
bmy_04265T0/1-717 SEEVTRDSRA EPGSPSAPGL PSHRTSSLDG AAVAAFSRTS STGLGSRSSP
ENSTTRP00000012953/1-705 SEEVTRDSQA EPGSPSAPGL PSHRASSLDG AAVAAFSRTS PTGLGSRSSP
451 500
ENSP00000412461/1-714 ----PGKKVQ TLPSWKSSFR QPRSLSGSPK GGGSSLEVPI ISSGGNWLMN
ENSBTAP00000010363/1-599 AATSPGKKVQ TLPNWRSSFR QSGSRSGSPK VGTSSLEVPI ISSGGNWLMN
BACU007611/1-722 AATSPGKKVQ TLPNWRSSFR QSGSRSGSPK VGTSSLEVPI ISSGGNWLMN
bmy_04265T0/1-717 AATSPGKKVQ TLPNWRSSFR QSGSRSGSPK VGTSSLEVPI ISSGGNWLMN
ENSTTRP00000012953/1-705 AAT-PGKKVQ TLPNWRSSFR QSGSRSGSPK VGTSSLEVPI ISSGGNWLMN
501 550
ENSP00000412461/1-714 GLSSLRGHRR ASSGDRLKDS GSVQRLSTYD NVPAPGLVPG IPSVASMAWS
ENSBTAP00000010363/1-599 GLSSLRGHRR ASSGDRLKDS GSEQRLSTYD NVPPQSCFPS TPSVASLPWS
BACU007611/1-722 GLSSLRGHRR ASSGDRFKDS GSEQRLSTYD NVPLPSPFPS TPSVASMPWS
bmy_04265T0/1-717 GLSSLRGHRR ASSGDRFKDS GSEQRLSTYD NVPLPSPFPS TPSVASMPWS
ENSTTRP00000012953/1-705 GLSSLRGHRR ASSGDRFKDS GSEQRLSTYD NVPLPSPFPS TPSVASMPWS
551 600
ENSP00000412461/1-714 GASSSESSVG GSLSSCTACR ASDSSARSSL HTDWALEPSP LPSSSEDPKS
ENSBTAP00000010363/1-599 GASSCEASAQ GSVSSCTACR ASDSSTCSSL HIEGALEPSP VLSSSEERRS
BACU007611/1-722 GASSGEASAR GSVSSCTACR ASDSSACSSL HTEGALEPSP VPSSSEECRS
bmy_04265T0/1-717 GASSCEASAR GSVSSCTACR ASDSSACSSL HTEGALEPSP VPSSSEECRS
ENSTTRP00000012953/1-705 GASSCEASAR GSVSSCTACR ASDSSACSSL HTEGALEPSP VPSSSEECRS
601 650
ENSP00000412461/1-714 LDLDHSMDEA GAGASNSEPS EPDSPTREHA RRSEALQGLV TELRAELCRQ
ENSBTAP00000010363/1-599 LDLDHGLDGV GACISSSEPS DPGSPAQDHA RRTEVLQGLV TELRAELCRQ
BACU007611/1-722 PDLDHGLDRV GACISSSEPS DPGSPTQDLA HRTEALQGLV TELRAELCRQ
bmy_04265T0/1-717 PDLDHGLDRV GACISSSEPS DPGSPTQDFA HRTEALQGLV TELRAELCRQ
ENSTTRP00000012953/1-705 PDLDHGLDRV GACISSSEPS DPGSPTQDLA HRTETLQGLV TELRAELCRQ
651 700
ENSP00000412461/1-714 RTEYERSVKR IEEGSADLRK RMSRLEEELD QEKKKYIMLE IKLRNSERAR
ENSBTAP00000010363/1-599 RTEYETNVKR LEEGSADLRK RMSRLEEELD QEKKKYTMLE IKLRNSERAR
BACU007611/1-722 RTEYEMSVKR LEEGSADLRK RMSRLEEELD QEKKKYTMLE IKLRNSERAR
bmy_04265T0/1-717 RTEYETSVKR LEEGSADLRK RMSRLEEELD QEKKKYTMLE IKLRNSERAR
ENSTTRP00000012953/1-705 RTEYETSVKR LEEGSADLRK RMLQLEEQLD QEKKKYTMLE IKLRNSERAR
701 750
ENSP00000412461/1-714 EDAERRNQLL QREMEEFFST LGSLTVGAKG ARAPK
ENSBTAP00000010363/1-599 EDAEKRNQLL QREMEEFFST LGSLTVGAKG ARALK
BACU007611/1-722 EDAEKRNQLL QKEMEEFFST LGSLTAGAKG ARAPK
bmy_04265T0/1-717 EDAEKRNQLL QKEMEEFFST LGSLTAGATG ARAPK
ENSTTRP00000012953/1-705 EDAEKRNQLL QKEMEEFFST LGSLTAGAKG ARAPK