KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:40:56 2014 Check: 00 .. Name: bmy_09025T0/1-409 Len: 684 Check: 9420 Weight: 1.00 Name: ENSP00000272542/1-679 Len: 684 Check: 5873 Weight: 1.00 Name: BACU017753/1-684 Len: 684 Check: 4744 Weight: 1.00 Name: ENSTTRP00000010448/1-684 Len: 684 Check: 6675 Weight: 1.00 Name: ENSBTAP00000010384/1-681 Len: 684 Check: 3277 Weight: 1.00 // 1 50 bmy_09025T0/1-409 ---------- ---------- ---------- ---------- ---------- ENSP00000272542/1-679 ----MATLIT STTAATAASG PLVDYLWMLI LGFIIAFVLA FSVGANDVAN BACU017753/1-684 MASTMATLIA TTIAATAASG PLVDYLWMLI LGFIIAFVLA FSVGANDVAN ENSTTRP00000010448/1-684 MASTMATLIA TTIAATAASG PLVDYLWMLV LGFVIAFVLA FSVGANDVAN ENSBTAP00000010384/1-681 MATTVTPLIT TAIAATAASG PLVDYLWMLI LGFIIAFVLA FSVGANDVAN 51 100 bmy_09025T0/1-409 ---------- ---------- ---------- ---------- ---------- ENSP00000272542/1-679 SFGTAVGSGV VTLKQACILA SIFETVGSVL LGAKVSETIR KGLIDVEMYN BACU017753/1-684 SFGTAVGSGV VTLKQACILA SIFETVGSVL LGAKVSETIR KGLIDVEMYN ENSTTRP00000010448/1-684 SFGTAVGSGV VTLKQACILA SIFETVGSVL LGAKVSETIR KGLIDVEMYN ENSBTAP00000010384/1-681 SFGTAVGSGV VTLKQACILA SIFETVGSVL LGAKVSETIR KGLIDVEMYN 101 150 bmy_09025T0/1-409 ---------- ---------- ---------- ---------- ---------- ENSP00000272542/1-679 STQGLLMAGS VSAMFGSAVW QLVASFLKLP ISGTHCIVGA TIGFSLVAKG BACU017753/1-684 STQELLMAGS VSAMFGSAVW QLVASFLKLP ISGTHCIVGA TIGFSLVAKG ENSTTRP00000010448/1-684 STQELLMAGS VSAMFGSAVW QLVASFLKLP ISGTHCIVGA TIGFSLVAKG ENSBTAP00000010384/1-681 STQKLLMAGS VSAMFGSAVW QLVASFLKLP ISGTHCIVGA TIGFSLVAKG 151 200 bmy_09025T0/1-409 ----MW---- ----SYFEKD FF-------- FF----FEVR ERGNVEQ--- ENSP00000272542/1-679 QEGVKWSELI KIVMSWFVSP LLSGIMSGIL FFLVRAFILH KADPVPNGLR BACU017753/1-684 QEGVKWSELI KIVMSWFVSP LLSGIMSGIL FFLVRAFILR KADPVPNGLR ENSTTRP00000010448/1-684 QEGVKWSELI KIVMSWFVSP LLSGIMSGIL FFLVRAFILR KADPVPNGLR ENSBTAP00000010384/1-681 QEGVKWSELI KIVLSWFVSP LLSGIMSGIL FFLVRAFILR KADPVPNGLR 201 250 bmy_09025T0/1-409 ---------- -VSLVKTKQK HPSFLG---- ---------- ---------- ENSP00000272542/1-679 ALPVFYACTV GINLFSIMYT GAPLLGFDKL PLWGTILISV GCAVFCALIV BACU017753/1-684 ALPVFYACTI GINLFSIMYT GAPLLGFDKL PLWGTILISV GCAVFCALIV ENSTTRP00000010448/1-684 ALPVFYACTV GINLFSIMYT GAPLLGFDKL PLWGTILISV GCAVFCALIV ENSBTAP00000010384/1-681 ALPVFYACTV GINLFSIMYT GAPLLGFDKL PLWGTILISV GCAVFCALIV 251 300 bmy_09025T0/1-409 ---------- ----EIKCSP SESPLMEKKN SLKEDHEETK LSLSDTETRN ENSP00000272542/1-679 WFFVCPRMKR KIEREIKCSP SESPLMEKKN SLKEDHEETK LSVGDIENKH BACU017753/1-684 WFFVCPRMKR KIEREIKCSP SESPLMEKKN SLKEDHEETK LSLSDTETRN ENSTTRP00000010448/1-684 WFFVCPRMKR KIEREIKSSP SESPLMEKKN SLKEDREETK LSLSDTETRN ENSBTAP00000010384/1-681 WFFVCPRMKR KIEREIKSSP SESPLMEKKN SLKEDHEETK LSLSDIETRN 301 350 bmy_09025T0/1-409 PVSEVGSAAT GPXRAAVEER TVSFKLGDLE EAPERERLPS VDLKEETSID ENSP00000272542/1-679 PVSEVGPATV -PLQAVVEER TVSFKLGDLE EAPERERLPS VDLKEETSID BACU017753/1-684 PVSEVGSAAT GPLRAAVEER TVSFKLGDLE EAPERERLPS VDLKEETSID ENSTTRP00000010448/1-684 PVSEVGSAAT GPLRAAVEER TVSFKLGDLE EAPERERLPS VDLKEETSID ENSBTAP00000010384/1-681 PVSEVGSATV -PHRAVVEER TVSFKLGDLE EAPERERLPS IDLKEETSID 351 400 bmy_09025T0/1-409 GTMNGAVQLP NGNLVQFNQA VSNQINSSGH YQYHTVHKDS GLYKELLHKL ENSP00000272542/1-679 STVNGAVQLP NGNLVQFSQA VSNQINSSGH YQYHTVHKDS GLYKELLHKL BACU017753/1-684 STVNGAVQLP NGNLVQFSQA VSNQINSSGH YQYHTVHKDS GLYKELLHKL ENSTTRP00000010448/1-684 GTMNGAVQLP NGNLVQFNQA VSNQINSSGH YQYHTVHKDS GLYKELLHKL ENSBTAP00000010384/1-681 GSVNGAVQLP NGNLVQFSQA VSNQINSSGH YQYHTVHKDS GLYKELLHKL 401 450 bmy_09025T0/1-409 HLAKVGDCMG DSGDKPLRRN NSYTSYTMAI CGMPLDSFRA KEGEQKGEEM ENSP00000272542/1-679 HLAKVGDCMG DSGDKPLRRN NSYTSYTMAI CGMPLDSFRA KEGEQKGEEM BACU017753/1-684 HLAKVGDCMG DSGDKPLRRN NSYTSYTMAI CGMPLDSFRA KEGEQKGEEM ENSTTRP00000010448/1-684 HLAKVGDCMG DSGDKPLRRN NSYTSYTMAI CGMPLDSFRA KEGEQKGEEM ENSBTAP00000010384/1-681 HLAKVGDCMG DSGDKPLRRN NSYTSYTMAI CGMPLDSFRA KEGEQKGEEM 451 500 bmy_09025T0/1-409 EKLTWPNGDS KKRIRMDSYT SYCNAVSDIH SASEIDMSVK AEMGLGDRKG ENSP00000272542/1-679 EKLTWPNADS KKRIRMDSYT SYCNAVSDLH SASEIDMSVK AEMGLGDRKG BACU017753/1-684 EKLTWPNGDS KKRIRMDSYT SYCNAVSDIH SASEIDMSVK AEMGLGDRKG ENSTTRP00000010448/1-684 EKLTWPNGDS KKRIRMDSYT SYCNAVSDIH SASEIDVSVK AEMGLGDRKG ENSBTAP00000010384/1-681 EKLTWPNADS KKRIRMDSYT SYCNAVSDIH SASEVDVSVK AEMGLGDRKG 501 550 bmy_09025T0/1-409 STSSLEEWYD QDKPEVSLLF QFLQILTACF GSFAHGGNDV SNAIGPLVAL ENSP00000272542/1-679 SNGSLEEWYD QDKPEVSLLF QFLQILTACF GSFAHGGNDV SNAIGPLVAL BACU017753/1-684 STSSLEEWCD QDKPEVSLLF QFLQILTACF GSFAHGGNDV SNAIGPLVAL ENSTTRP00000010448/1-684 STSSLEEWCD QDKPEVSLLF QFLQILTACF GSFAHGGNDV SNAIGPLVAL ENSBTAP00000010384/1-681 STSSLEEWCD QDKPEVSLLF QFLQILTACF GSFAHGGNDV SNAIGPLVAL 551 600 bmy_09025T0/1-409 YLVYDTGDVS SKVATPIWLL LYGGVGICIG LWVWGRRVIQ TMGKDLTPIT ENSP00000272542/1-679 YLVYDTGDVS SKVATPIWLL LYGGVGICVG LWVWGRRVIQ TMGKDLTPIT BACU017753/1-684 YLVYDTGDVS SKVATPIWLL LYGGVGICIG LWVWGRRVIQ TMGKDLTPIT ENSTTRP00000010448/1-684 YLVYDTGDVS SKVATPIWLL LYGGVGICIG LWVWGRRVIQ TMGKDLTPIT ENSBTAP00000010384/1-681 YLVYDTGDVS SKVATPIWLL LYGGVGICIG LWVWGRRVIQ TMGKDLTPIT 601 650 bmy_09025T0/1-409 PSSGFSIELA SALTVVIASN IGLPISTTHC KVSVM----- ---------- ENSP00000272542/1-679 PSSGFSIELA SALTVVIASN IGLPISTTHC KVGSVVSVGW LRSKKAVDWR BACU017753/1-684 PSSGFSIELA SALTVVIASN IGLPISTTHC KVGSVVSVGW LRSKKAVDWR ENSTTRP00000010448/1-684 PSSGFSIELA SALTVVIASN IGLPISTTHC KVGSVVSVGW LRSKKAVDWR ENSBTAP00000010384/1-681 PSSGFSIELA SALTVVIASN IGLPISTTHC KVGSVVSVGW LRSKKAVDWR 651 700 bmy_09025T0/1-409 ---------- ---------- ---------- ---- ENSP00000272542/1-679 LFRNIFMAWF VTVPISGVIS AAIMAIFRYV ILRM BACU017753/1-684 LFRNIFMAWF VTVPISGVIS AAIMAVFKYV ILRV ENSTTRP00000010448/1-684 LFRNIFMAWF VTVPISGVIS AAIMAVFKYV ILRV ENSBTAP00000010384/1-681 LFRNIFMAWF VTVPISGVIS AAIMAVFKYI IL--