KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:40:56 2014 Check: 00 .. Name: ENSP00000384092/1-267 Len: 387 Check: 9452 Weight: 1.00 Name: ENSBTAP00000010386/1-265 Len: 387 Check: 1938 Weight: 1.00 Name: bmy_05475T0/1-371 Len: 387 Check: 7465 Weight: 1.00 Name: ENSTTRP00000006210/1-259 Len: 387 Check: 6566 Weight: 1.00 // 1 50 ENSP00000384092/1-267 ---------- --------MP RSCCSRSGAL LLALLLQASM EVRGWCLESS ENSBTAP00000010386/1-265 ---------- --------MP RLCSSRSGAL LLALLLQASM EVRGWCLESS bmy_05475T0/1-371 MAAQARWRLR QEPQPAWKMP RLCSTCSGVL LLALLLQASM EVRGWCLEGS ENSTTRP00000006210/1-259 ---------- --------MP RLCSTCLGVL LLTLLLQASM EVRGWCLESS 51 100 ENSP00000384092/1-267 QCQDLTTESN LL-------- ---------- ---------- ---------- ENSBTAP00000010386/1-265 QCQDLTTESN LL-------- ---------- ---------- ---------- bmy_05475T0/1-371 QCQDLTTESN LLVCGLWPPS WFGYQMGLGL GQHKERGMGK GKFIPRDMEA ENSTTRP00000006210/1-259 QCQDLTTETN LL-------- ---------- ---------- ---------- 101 150 ENSP00000384092/1-267 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010386/1-265 ---------- ---------- ---------- ---------- ---------- bmy_05475T0/1-371 GVGRRPRQGP HSALAPLVRP ARAEGAEAQG QRVGGEDAGE GDGGRGARGP ENSTTRP00000006210/1-259 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000384092/1-267 --------EC IRACKPDLSA ETPMFPGNGD EQPLTENPRK YVMGHFRWDR ENSBTAP00000010386/1-265 --------AC IRACKPDLSA ETPVFPGNGD EQPLTENPRK YVMGHFRWDR bmy_05475T0/1-371 DALAPLQQAC IRACKPDLSA ETPVFPGNGD EQPLTENPRK YVMSHFRWDR ENSTTRP00000006210/1-259 --------AC IRACKPDLSA ETPVFPGNGD EQPLTENPRK YVMSHFRWDR 201 250 ENSP00000384092/1-267 FGRRNSSSS- GSSGAGQKRE DVSAGEDCGP LPEGGPEPRS DGAKPGPREG ENSBTAP00000010386/1-265 FGRRNGSSSS GVGGAAQKRE -----EEVAV -GEG-PGPRG DDAETGPRED bmy_05475T0/1-371 FGRRNGSSG- --GGAVQKRE -----EEEGV GGEG-PGPRG DGAEPGPRED ENSTTRP00000006210/1-259 FGRRNSSSS- --GGAAQKRE -------EGP GGEG-PGPRG DGAEPGPRED 251 300 ENSP00000384092/1-267 KRSYSMEHFR WGKPVGKKRR PVKVYPNGAE DESAEAFPLE FKRELTGQRL ENSBTAP00000010386/1-265 KRSYSMEHFR WGKPVGKKRR PVKVYPNGAE DESAQAFPLE FKRELTGERL bmy_05475T0/1-371 KRSYSMEHFR WGKPVGKKRR PVKVYPNGAE DESAEAFPLE FKRELAGERP ENSTTRP00000006210/1-259 KRSYSMEHFR WGKPVGKKRR PVKVYPNGAE DESAEAFPLE FKRELAGERP 301 350 ENSP00000384092/1-267 REGDGPDGPA DDGAGAQADL EHSLL----- VAAEKKDEGP YRMEHFRWGS ENSBTAP00000010386/1-265 EQARGPEAQA -ESAAARAEL EYGLVAEAEA EAAEKKDSGP YKMEHFRWGS bmy_05475T0/1-371 EPARGP---- -EGAAARAEL EYGLV--AEA EAAGKKDEGP YKMEHFRWGS ENSTTRP00000006210/1-259 EPVRGPEAPA -EGAAARAEL EYGLV--AEA EAAEKKDEGP YKMEHFRWGS 351 400 ENSP00000384092/1-267 PPKDKRYGGF MTSEKSQTPL VTLFKNAIIK NAYKKGE ENSBTAP00000010386/1-265 PPKDKRYGGF MTSEKSQTPL VTLFKNAIIK NAHKKGQ bmy_05475T0/1-371 PPKDKRYGGF MTSEKSQTPL VTLFKNAIIK NAHKKGQ ENSTTRP00000006210/1-259 PPKDKRYGGF MTSEKSQTPL VTLFKNTIIK NAHKKGQ