KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:41:07 2014 Check: 00 .. Name: ENSP00000398523/1-470 Len: 476 Check: 4868 Weight: 1.00 Name: ENSBTAP00000010432/1-450 Len: 476 Check: 4045 Weight: 1.00 Name: bmy_09800T0/1-421 Len: 476 Check: 4956 Weight: 1.00 Name: ENSTTRP00000008057/1-448 Len: 476 Check: 5119 Weight: 1.00 Name: BACU006399/1-448 Len: 476 Check: 6212 Weight: 1.00 // 1 50 ENSP00000398523/1-470 MEETIKDPPT SAVLLDHCHF SQVIFNSVEK FYIPGGDVTC HYTFTQHFIP ENSBTAP00000010432/1-450 MEETVDDPPT SAVLLDHCHF SQVIFNSVEK FYIPGGDITC YYTLTQHFIP bmy_09800T0/1-421 MEETIEDPPT SAVLLDHCHF SQVIFNSVEK FYVPGGDITC YYTLTQHFIP ENSTTRP00000008057/1-448 MEETVEDPPT SAVLLDHCHF SQVIFNSVEK FYVPGGDITC YYTLTQHFIP BACU006399/1-448 MEETIEDPPT SAVLLDHCHF SQVIFNSVEK FYVPGGDITC YYTLTQHFIP 51 100 ENSP00000398523/1-470 RRKDWIGIFR AFKCFQDKLE QELLKWRSQG QKLQVGWKTT REYYTFMWVT ENSBTAP00000010432/1-450 RRKDWIGIFR ---------- ---------- ----VGWKTT REYYTFMWVT bmy_09800T0/1-421 RRKDWIGIFR ---------- ---------- ----VGWKTT REYYTFMWVT ENSTTRP00000008057/1-448 RRKDWIGIFR ---------- ---------- ----VGWKTT REYYTFMWVT BACU006399/1-448 RRKDWIGIFR ---------- ---------- ----VGWKTT REYYTFMWVT 101 150 ENSP00000398523/1-470 LPIDLNNKSA KQQEVQFKAY YLPKDDEYYQ FCYVDEDGVV RGASIPFQFR ENSBTAP00000010432/1-450 LPVDLNSESA KQQEVQFKAY YLPKDDEYYQ FCYVDQDGVV RGASIPFQFR bmy_09800T0/1-421 LPVDLNSKSA KQQEVQFKAY YLPKDDEYYQ FCYVDQDGVV RGASIPFQFR ENSTTRP00000008057/1-448 LPVDLNSKSP KQQEVQFKAY YLPKDDEYYQ FCYVDQDGVV RGASIPFQFC BACU006399/1-448 LPVDLNSKPA KQQEVQFKAY YLPKDDEYYQ FCYVDQDGVV RGASIPFQFR 151 200 ENSP00000398523/1-470 PENEEDILVV TTQGEVEEIE QHNKELCKEN QELKDSCISL QKQNSDMQAE ENSBTAP00000010432/1-450 PENEEDILVV TTQSEVEEIE QHNKELCKEN RELKDSCVSL QKQNSDMQAT bmy_09800T0/1-421 PENEEDILVV TTQGEVEEIE QHNKELCKEN KQLKDSCVGL QKQNSDTQAE ENSTTRP00000008057/1-448 PENEEDILVV TTQGEVEEIE QHNEELCREN KQLKDSCVSL QKQNADMQAR BACU006399/1-448 PENEEDILVV TTQGEVEEIE QHNKELCKEN KQLKDSCVGL QKQNSDTQAE 201 250 ENSP00000398523/1-470 LQKKQEELET LQSINKKLEL KVKEQKDYWE TELLQLKEQN QKMSSENEKM ENSBTAP00000010432/1-450 LQKKQEELET LKSINKKLEQ TMKEQKDCWE IELLQLKEQN QKMSSENEKM bmy_09800T0/1-421 LQRKQEELET LKSINKKLEQ TMKEQKDCWE TELLQLKEQN QKMSSENEKM ENSTTRP00000008057/1-448 LQKKQEELET LKSINKKLEQ TMKEQKDCWE TELLQLKEQN QKMSSENEKM BACU006399/1-448 LQRKQEELET LKSINKKLEQ TMKEQKDCWE TELLQLKEQN QKMSSENEKM 251 300 ENSP00000398523/1-470 GIRVDQLQAQ LSTQEKEMEK LVQGDQDKTE QLEQLKKEND HLFLSLTEQR ENSBTAP00000010432/1-450 GVRVDQLQAQ LSNQGREMEK LVQGVQDKTE QLEHLKEENG QLFLSLTEQR bmy_09800T0/1-421 GVRVDQLQAQ LSTQEKEMEK LVQGVQDKTE QLEHLKKENG QLFLSLTEQG ENSTTRP00000008057/1-448 GVRVDQLQAQ LSTQEKEIEK LVQGVQDKAE QLEDLKKENG QLFLSLTEQR BACU006399/1-448 GVRVDQLQAQ LSTQEKEMEK LVQGVQDKTE QLEHLKKENG QLFLSLTEQR 301 350 ENSP00000398523/1-470 KDQ-KKLEQT VEQMKQNETT AMKKQQELMD ENFDLSKRLS ENEIICNALQ ENSBTAP00000010432/1-450 EHQ-KKLEQT VEEMKQKETT AAKKQQELTD QNMDLSKRLS ENMIIHDVLQ bmy_09800T0/1-421 TSEGARMDSG GDEAERNYCS ----EETTGD QNFDLSKRLS ENKIMYNVLQ ENSTTRP00000008057/1-448 EHR-KELERT VEEMKQKETT AAKKEQELTD QNFDLSKRLS ENKIIYNVLQ BACU006399/1-448 EHQ-KELEWT VEEMKQKETT AAKKQQELTD QNFDLSKRLS ENKIMYNVLQ 351 400 ENSP00000398523/1-470 RQKERLEGEN DLLKRENSRL LSYMGLDFNS LPYQVPTSDE GGARQNPGLA ENSBTAP00000010432/1-450 REKEKMEKEN DYLKRENNRL LSYMGLDCDS LSYQVPTSNQ GGTRQDPGLV bmy_09800T0/1-421 KEKERMEEEN DLLKMENSTL LSYMGLNYDS LPYQAPTSNQ GGARQNPGLV ENSTTRP00000008057/1-448 KEKERMEEEN GLLKMENSTL LSYMGLNYDS LPYQAPASNQ GGARPNPGLV BACU006399/1-448 KEKERVEEEN DLLKMENSTL LSYMGLNYDS LPYQAPTSNQ GAARQNPGLV 401 450 ENSP00000398523/1-470 YGNPYSGIQE SSSPSPLSIK KCPICKAD-- -DICDH--TL EQQQMQPLCF ENSBTAP00000010432/1-450 FGNPYSGIQE SSAPSLLSIK KCPTCKSDFA ADVFDHNLAL E-QHLQTLSL bmy_09800T0/1-421 YGNPYSGIQE SSAPSL---- ---------- ---------- ---HMQTLSL ENSTTRP00000008057/1-448 YGNPYSGIQE SPAPSLLSIK KCPTCKSDFP DDLFDH--TL E-QHMQPLSL BACU006399/1-448 YGNPYSGIQE SSAPGLLSIK KCPTCKSDFP DDLFDH--TL E-QHMQTLSL 451 500 ENSP00000398523/1-470 NCPICDKIFP ATEKQIFEDH VFCHSL ENSBTAP00000010432/1-450 NCPICDKTFP AKEKQIFEDH VFCHTL bmy_09800T0/1-421 NCPICDKAFP AKEKQIFEDH VFCHTL ENSTTRP00000008057/1-448 NCPICDKAFP AKEKQIFEDH VLCHTL BACU006399/1-448 NCPICDKAFP AKEKQIFEDH VFCHTL