KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:41:07 2014 Check: 00 .. Name: ENSP00000475738/1-346 Len: 515 Check: 3961 Weight: 1.00 Name: ENSBTAP00000010434/1-506 Len: 515 Check: 3436 Weight: 1.00 Name: bmy_12789T0/1-336 Len: 515 Check: 1776 Weight: 1.00 Name: BACU012255/1-219 Len: 515 Check: 7960 Weight: 1.00 Name: ENSTTRP00000000842/1-347 Len: 515 Check: 3828 Weight: 1.00 // 1 50 ENSP00000475738/1-346 MEFSGRKWRK LRLAGDQRNA SYPHCLQFYL QPPSENISLI EFENLAIDRV ENSBTAP00000010434/1-506 MEFSGGKRKK LRLADDQRNA CYPHSLQFYL QPPSGNVSLT EFETLAIDRV bmy_12789T0/1-336 MQFLGGNRRK LRLADDQRNA CYPHSLLFYL QPPSGNISLI EFENLAIDRV BACU012255/1-219 ---MRQLHKA LRENHHLR-- -HGGRMQYGL --------FL KGIGLTLEQA ENSTTRP00000000842/1-347 MQFLGGNRRK LRLADDQRNA CYPHSLQFYL QPPSGNISLI EFENLAIDRV 51 100 ENSP00000475738/1-346 KLLKSVENLG VSYVKGTEQY QSKLESELRK LKFSYRENLE DEYEPRRRDH ENSBTAP00000010434/1-506 KLLKSVENLG LSYMKGTEQY QSKLEAELRK LKFSYRESLE DEYEPRRKDH bmy_12789T0/1-336 KLLKAVKNLG VSYVKGTAQY Q--------- ---------- ---------- BACU012255/1-219 LQFWKQE--- --FIRG---- --KMDPDKFD KGYSYNIRHS FGKEGKRTDY ENSTTRP00000000842/1-347 KLLKAVENLG VSYVKGSEQY QSKLEAELRK LKFSYRENLG DEYEPRRRDH 101 150 ENSP00000475738/1-346 ISHFILRLAY CQSEELRRW- ---FIQQEMD LLRFR---FS ILPK--DKIQ ENSBTAP00000010434/1-506 ISHFILRLAY CQSEDLRRW- ---FIQQEMD LLRFR---FS ILPK--DKIQ bmy_12789T0/1-336 -------IFY PRTK------ ---------- --------FS ---------- BACU012255/1-219 TPYSCLKIIL TNPPSQGDYH GCPFRHSDPE LLRQKLQAYK IPPSGINQIL ENSTTRP00000000842/1-347 ISHFILRLAY CQSEELRRW- ---FIQQEMD LLRFR---FS ILPK--DKIQ 151 200 ENSP00000475738/1-346 DFLKDSQLQF EAISDEEKTL REQEIVASSP SLSGLKLGFE SIYKIPFADA ENSBTAP00000010434/1-506 SFLKDSHLQF EAISDEEKTV REQDIIASSS TFGGAQLDPE SVYKIPFAEA bmy_12789T0/1-336 -FLEDSHLQF EAISDEEKTL REQDIMASSH SL-------- ---------- BACU012255/1-219 DLVKGIHYQV AC-------- --QKFFEMTH NVDDCGFSLS HPNQFFFESQ ENSTTRP00000000842/1-347 SFLKDSHLQF EAISDEDKTL REQDIMASSH SLGGVQLELE SVYKIPFADA 201 250 ENSP00000475738/1-346 LDLFRGRKVY LEDGFAYVPL KDIVAIILNE FRAKLSKALA LTARSLPAVQ ENSBTAP00000010434/1-506 LDLFRGRKVY LENGFAYVPH KDIVAIILNE FRTKLSKALA LTARSLPAVQ bmy_12789T0/1-336 -----GRKVY LENGFAYVQL KDIVAIILNE FRTKLSKVLA LTARSLPAVQ BACU012255/1-219 RILSGGKDVK KESVQPETPQ PK-------- ---------- ------PSVQ ENSTTRP00000000842/1-347 LDLFRGRKVY LENGFAYVPL KDIVAIILNE FRTKLSKALA LTARSLPAVQ 251 300 ENSP00000475738/1-346 SDERLQPLLN HLSHSYTSQD YSTQGNVGKI SLDQIDLLST KSFPLYMHQL ENSBTAP00000010434/1-506 SDERLQPLLN HLSHSYTGQD YSTQGNAGKI SLDQIDSLST KSFPPCMRQL bmy_12789T0/1-336 TDERLQPLLN HLSHLYTGQD YSTQANVGKV SLDQIDSLST KSFPPCIDQL BACU012255/1-219 RSKDVSSALA SLNSS----- ---------L EMD------- ---------- ENSTTRP00000000842/1-347 SDERLQPLLN HLSHSYTGQD YSTQGNVGKV SLDQIDSLST KSFPPCMRQL 301 350 ENSP00000475738/1-346 HKALRENHHL CHGGRMQYVL FLKGIGLTLE QTLQFWKQEF IKGKMDPDKF ENSBTAP00000010434/1-506 HKALRENHHL RHGGRMQYGL FLKGIGLTLE QALQFWKQEF IRGNMDPDKF bmy_12789T0/1-336 HKALRENHHL RHGGRMQYGL FLKDIGLTLE QAWQFWKQTF IRGKMDPDKF BACU012255/1-219 ---------- ---------- -LEG----LE ELLQ------ ---------- ENSTTRP00000000842/1-347 HKALRENHHL RHGGRMQYGL FLKGIGLTLE QALQFWKQEF IRGKMDPDKF 351 400 ENSP00000475738/1-346 DKGYS----- ---------- ---------- ---------- ---------- ENSBTAP00000010434/1-506 DKGYSYNIRH SYGKEGKRTD YTPYSCMKII LTNTPGQGDY HGCPFRHSDP bmy_12789T0/1-336 DKGYSYNIRH SFGKEGKRTD YTLYSCLKII LTNPPSQGDY HGCPFWHSDP BACU012255/1-219 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000842/1-347 DKGYSY---- ---------- ---------- ---------- ---------- 401 450 ENSP00000475738/1-346 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010434/1-506 ELLRQKLQAY KIPPAGISQI LDLVKGTHYQ VACQKFFEMT HNVDDCGFSL bmy_12789T0/1-336 GLMRQKLQAY KIPPSGINQI LDLVKGTHYQ ---------- ---------- BACU012255/1-219 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000842/1-347 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000475738/1-346 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010434/1-506 SHPNQFFFES QRILSGGKDI KKDSVQPETP QPRPSVQRSK DSSSTLDSLS bmy_12789T0/1-336 ---------- ---------- ---------- ---------- ---------- BACU012255/1-219 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000842/1-347 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000475738/1-346 ---------- ----- ENSBTAP00000010434/1-506 SALDMDLEEL EELLQ bmy_12789T0/1-336 ---------- ----- BACU012255/1-219 ---------- ----- ENSTTRP00000000842/1-347 ---------- -----