KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:41:08 2014 Check: 00 .. Name: ENSP00000317721/1-390 Len: 451 Check: 7165 Weight: 1.00 Name: ENSTTRP00000003874/1-389 Len: 451 Check: 5200 Weight: 1.00 Name: ENSBTAP00000010444/1-392 Len: 451 Check: 4098 Weight: 1.00 Name: bmy_00127T0/1-414 Len: 451 Check: 7476 Weight: 1.00 Name: BACU010493/1-390 Len: 451 Check: 3738 Weight: 1.00 // 1 50 ENSP00000317721/1-390 MAAQKDLWDA IVIGAGIQGC FTAYHLAKHR KRILLLEQFF LPHSRGSSHG ENSTTRP00000003874/1-389 MAAQKDLYDA IVIGAGIQGC FTAYHLAKHR KRVLLLEQFF LPHS-GSSHG ENSBTAP00000010444/1-392 MAAQRELYDA IVIGAGIQGC FTAYHLAKHS KKVLLLEQFF LPHSRGSSHG bmy_00127T0/1-414 MAAQKDLYDA IVIGAGIQGC FTAYHLAKHR KRVLLLEQFF LPHSRGSSHG BACU010493/1-390 MAAQKDLYDA IVIGAGIQGC FTAYHLAKHR KRVLLLEQFF LPHSRGSSHG 51 100 ENSP00000317721/1-390 QSRIIRKAYL EDFYTRMMHE CYQIWAQLEH EAGTQLHRQT GLLLLGMKEN ENSTTRP00000003874/1-389 QSRIIRRAYP EDFYTQMMAE CYQIWAQLEH EAGTQLYRQT GLLLLGMKEN ENSBTAP00000010444/1-392 QSRIIRRAYP EDFYTQMMAE CYSLWAQLEH EAGTQLYRQT GLLLLGMKEN bmy_00127T0/1-414 QSXIIQRAYA EDFYTQMMAE CYQIWAQLEH EAGTQLHRQT GLLLLGMKEN BACU010493/1-390 QSRIIRRAYP EDFYTQMMAE CYQIWAQLEH EAGTQLYRQT GLLLLGMKEN 101 150 ENSP00000317721/1-390 QELKTIQANL SRQRVEHQCL SSEELKQRFP NIRLPRGEVG LLDNSGGVIY ENSTTRP00000003874/1-389 AELKIIQATL SRQGVEHQCL PSEELKQRFP NIRLARGEVG LLEKSGGVLY ENSBTAP00000010444/1-392 PELKIIQATL SRQGVEHQCL SSEELKQRFP NIRLARGEVG LLEVSGGVLY bmy_00127T0/1-414 AELKIIQATL SRQGVEHQCL PSEELKQRFP NIRLARGEVG LLEKSGGVLY BACU010493/1-390 AELKIIQATL SRQGVEHQCL PSEELKQRFP NIRLARGEVG LLEKSGGVLY 151 200 ENSP00000317721/1-390 AYKALRALQ- ---------- ---------- ---------- ---------- ENSTTRP00000003874/1-389 ADKALRALQ- ---------- ---------- ---------- ---------- ENSBTAP00000010444/1-392 ADKALRALQ- ---------- ---------- ---------- ---------- bmy_00127T0/1-414 ADKALRALQV ISCSIRGTAA PALGILGPHQ PSPDPQLDES LCPASFSLDF BACU010493/1-390 ADKALRALQ- ---------- ---------- ---------- ---------- 201 250 ENSP00000317721/1-390 ---------- --------DA IRQLGGIVRD GEKVVEINPG LLVTVKTTSR ENSTTRP00000003874/1-389 ---------- --------DA IRQLGGIVHD GEKVMEIKPG LLVMVKTTSR ENSBTAP00000010444/1-392 ---------- --------DA IRQLGGIVHD GEKVVEIKSG LPVMVKTTSR bmy_00127T0/1-414 LDWAVLYTLL GLDNMGEEDA IRQLGGIVHD GEKVMEIKPG LLVV------ BACU010493/1-390 ---------- --------DA IRQLGGIVHD GEKVMEIKPG LLVVVKTTSR 251 300 ENSP00000317721/1-390 SYQAKSLVIT AGPWTNQLLR PLGIEMPLQT LRINVCYWRE MVPGSYGVSQ ENSTTRP00000003874/1-389 SYQAKSLIIT AGPWTNRLLR PLGIELPLQT LRINVCYWRE KVPGSYGVSQ ENSBTAP00000010444/1-392 SYQAKSLIIT AGPWTNRLLR PLGAELPLQT LRINVCYWQE KVPGSYSVSQ bmy_00127T0/1-414 ---------- ---------- ---------T LRINVCYWRE KVPGSYGVSQ BACU010493/1-390 SYQAKSLIIT AGPWTNRLLR PLGIELPLQT LRINVCYWRE KVPGSYGVSQ 301 350 ENSP00000317721/1-390 AFPCFLWLG- -LCPHHIYGL PTGEYPGLMK VSYHHGNHAD PEERDCPTAR ENSTTRP00000003874/1-389 AFPCFLGFG- -LAPYHIYGL PSGEYPGLMK VCYHHGNNAD PEERDCPAAF ENSBTAP00000010444/1-392 AFPCFMGLGL SLAPHHIYGL PSREYPGLMK VCYHHGNNAD PEERDCPAAF bmy_00127T0/1-414 AFPCFLGFS- -LAPYHIYGL PSGEYPGLMK VCYHHGNNAD PEERDCPAAF BACU010493/1-390 AFPCFLGFS- -LAPYHIYGL PSGEYPGLMK VCYHHGNNAD PEERDCPAAF 351 400 ENSP00000317721/1-390 TDIGDVQILS SFVRDHLPDL KPEPAVIESC MYTNTPDEQF ILDRHPKYDN ENSTTRP00000003874/1-389 SDIQDVHILS CFVRDHLPNL EPEPAVXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000010444/1-392 SDIQDVHILS GFVRDHLPDL QPEPAVMEHC MYTNTPDGHF VLDRHPKYDN bmy_00127T0/1-414 SDIQDVHILS CFVRDHLPNL EPEPAVMEHC MYTNTPDEHF ILDRHPKYDN BACU010493/1-390 SDIQDVHILS CFVRDHLPNL EPEPAVMEHC MYTNTPDEHF ILDRHPKYDN 401 450 ENSP00000317721/1-390 IVIGAGFSGH GFKLAPVVGK ILYELSMKLT PSYDLAPFRI SRFPSLGKAH ENSTTRP00000003874/1-389 XXXXXXXXXH GFKLSPVVGK ILYELSMKLM PSYDLTPFRI SRFPRLGKAH ENSBTAP00000010444/1-392 IVIGAGFSGH GFKLSPVVGK ILYELSMKLT PSYDLTPFRI SRFPSLGKAH bmy_00127T0/1-414 IVIGAGFSGH GFKLSPVVGK ILYELSMKLM PSYDLTPFRI SRFPCLGKAH BACU010493/1-390 IVIGAGFSGH GFKLSPVVGK ILYELSMKLM PSYDLTPFRI SRFPCLGKAH 451 500 ENSP00000317721/1-390 L ENSTTRP00000003874/1-389 I ENSBTAP00000010444/1-392 L bmy_00127T0/1-414 M BACU010493/1-390 M