KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:41:11 2014 Check: 00 .. Name: ENSTTRP00000005169/1-909 Len: 923 Check: 37 Weight: 1.00 Name: ENSP00000312550/1-910 Len: 923 Check: 1337 Weight: 1.00 Name: ENSBTAP00000010460/1-910 Len: 923 Check: 9795 Weight: 1.00 Name: bmy_00770T0/1-923 Len: 923 Check: 4029 Weight: 1.00 Name: BACU011915/1-923 Len: 923 Check: 4593 Weight: 1.00 // 1 50 ENSTTRP00000005169/1-909 MGAPRAQHPP PPQLLFLILL SCPWIQGLPL KEEEALPEPG NETPTVASEA ENSP00000312550/1-910 MGTPRAQHPP PPQLLFLILL SCPWIQGLPL KEEEILPEPG SETPTVASEA ENSBTAP00000010460/1-910 MGTPRAQHPP PPQLLFLFLL SCPWIQGLPL KEEEALPEPG SETPTVASEA bmy_00770T0/1-923 MGTPRAQHPP PPQLLFLILL SCPWIQGLPL KEEEALPEPG NETPTVASEA BACU011915/1-923 MGTPRAQHPP PPQLLFLILL SCPWIQGLPL KEEEALPEPG NETPTVASEA 51 100 ENSTTRP00000005169/1-909 LAELLHGALL RRGPEMGYLP GSDPDPTLAT PPAGQTLAAP SLPRATEPGT ENSP00000312550/1-910 LAELLHGALL RRGPEMGYLP GSDRDPTLAT PPAGQTLAVP SLPRATEPGT ENSBTAP00000010460/1-910 LAELLHGALL RKGPEMGYLP GSDPDPTLAT PPVGQTIAAP FLPRATEPGT bmy_00770T0/1-923 LAELLHGALL RRGPEMGYLP GSDPDPTLAT PPAGQTLAAP SLPRATEPGT BACU011915/1-923 LAELLHGALL RRGPEMGYLP GSDPDPTLAT PPAGQTLAAP SLPRATEPGT 101 150 ENSTTRP00000005169/1-909 GPLTTAVTPK GGRGAGPTAP ELLTPPPGTT APPLPGPASP GPPLGPEGGE ENSP00000312550/1-910 GPLTTAVTPN GVRGAGPTAP ELLTPPPGTT APPPPSPASP GPPLGPEGGE ENSBTAP00000010460/1-910 GPLTTAVTPK GGRGAGPTAP ELLTPPPGTT APPLPGPASP GPPLGPEGGE bmy_00770T0/1-923 GPLTTAVTPK EGRGAGPTAP ELLTPPPGTT APPLPGPASP GPPLGPEGGE BACU011915/1-923 GPLTTAVTPK EGRGAGPTAP ELLTPPPGTT APPLPGPASP GPPLGPEGGE 151 200 ENSTTRP00000005169/1-909 EETTTTIITT TTVTTTVTSP VLCNNNISEG EGHVESPDLG SAASRTLGLL ENSP00000312550/1-910 EETTTTIITT TTVTTTVTSP VLCNNNISEG EGYVESPDLG SPVSRTLGLL ENSBTAP00000010460/1-910 EETTTTIITT TTVTTTVTSP VLCNNNISEG EGHVESPDLG SSTSRTLGLL bmy_00770T0/1-923 EETTTTIITT TTVTTTVTSP VLCNNNISEG EGHVESPDLG SAASRTLGLL BACU011915/1-923 EETTTTIITT TTVTTTVTSP VLCNNNISEG EGHVESPDLG SAASRTLGLL 201 250 ENSTTRP00000005169/1-909 DCTYSIHVYP GYGIEIQVQT LNLSREEELL VLAGGGSPGL APRLLANSSM ENSP00000312550/1-910 DCTYSIHVYP GYGIEIQVQT LNLSQEEELL VLAGGGSPGL APRLLANSSM ENSBTAP00000010460/1-910 DCTYSIHVYP GYGIEIQVQM LNLSREEELL VLAGGGSPGL APRLLANSSM bmy_00770T0/1-923 DCTYSIHVYP GYGIEIQVQT LNLSREEELL VLAGGGSPGL APRLLANSSM BACU011915/1-923 DCTYSIHVYP GYGIEIQVQT LNLSQEEELL VLAGGGSPGL APRLLANSSM 251 300 ENSTTRP00000005169/1-909 LGEGQVLRSP TNRLLLHFQS PRVPRGGGFR IHYQAYLLSC GFPPRPAHGD ENSP00000312550/1-910 LGEGQVLRSP TNRLLLHFQS PRVPRGGGFR IHYQAYLLSC GFPPRPAHGD ENSBTAP00000010460/1-910 LGEGQVLRSP TNRLLLHFQS PRVPRGAGFR IHYQAYLLSC GFPPQPAHGD bmy_00770T0/1-923 LGEGQVLRSP TNRLLLHFQS PRVPRGGGFR IHYQAYLLSC GFPPRPAHGD BACU011915/1-923 LGEGQVLRSP TNRLLLHFQS PRVPRGSGFR IHYQAYLLSC GFPPRPAHGD 301 350 ENSTTRP00000005169/1-909 VSVTDLHPGG TATFHCDSGY QLQGEETLIC LNGTRPAWSS EPPSCMXXXX ENSP00000312550/1-910 VSVTDLHPGG TATFHCDSGY QLQGEETLIC LNGTRPSWNG ETPSCMASCG ENSBTAP00000010460/1-910 VSVTDLHPGG TATFHCDSGY QLQGEETLVC LNGTRPAWSS EPPSCMASCG bmy_00770T0/1-923 VSVTDLHPGG TATFHCDSGY QLQGEETLIC LNGTRPAWSS EPPSCMASCG BACU011915/1-923 VSVTDLHPGG TATFHCDSGY QLQGEETLIC LNGTRPAWSS EPPSCMASCG 351 400 ENSTTRP00000005169/1-909 XXXXXXXXXX XXXXXXXXXX XXXXXXXWVI EAAEGRRLH- HFERVSLDED ENSP00000312550/1-910 GTIHNATLGR IVSPEPGGAV GPNLTCRWVI EAAEGRRLHL HFERVSLDED ENSBTAP00000010460/1-910 GTIHNATLGR IVSPEPGGAA GPNLTCRWVI EAAEGRRLHL HFERVSLDED bmy_00770T0/1-923 GTIHNATLGR IVSPEPGGAA GPNLTCRWVI EAAEGRRLHL HFERVSLDED BACU011915/1-923 GTIHNATLGR IVSPEPGGAA GPNLTCRWVI EAAEGRRLHL HFERVSLDED 401 450 ENSTTRP00000005169/1-909 NDRLMVRSGG SPLSPVIYDS DMDDVPERGL ISDAQSLYVE LLSETPANPL ENSP00000312550/1-910 NDRLMVRSGG SPLSPVIYDS DMDDVPERGL ISDAQSLYVE LLSETPANPL ENSBTAP00000010460/1-910 NDRLMVRSGG SPLSPVIYDS DMDDVPERGL ISDAQSLYVE LLSETPANPL bmy_00770T0/1-923 NDRLMVRSGG SPLSPVIYDS DMDDVPERGL ISDAQSLYVE LLSETPANPL BACU011915/1-923 NDRLMVRSGG SPLSPVIYDS DMDDVPERGL ISDAQSLYVE LLSETPANPL 451 500 ENSTTRP00000005169/1-909 LLSLRFEAFE EDRCFAPFLA HGNVTTTDPE YRPGALATFS CLPGYALEPP ENSP00000312550/1-910 LLSLRFEAFE EDRCFAPFLA HGNVTTTDPE YRPGALATFS CLPGYALEPP ENSBTAP00000010460/1-910 LLSLRFEAFE EDRCFAPFLA HGNVTTTDPE YRPGALATFS CLPGYALEPP bmy_00770T0/1-923 LLSLRFEAFE EDRCFAPFLA HGNVTTTDPE YRPGALATFS CLPGYALEPP BACU011915/1-923 LLSLRFEAFE EDRCFAPFLA HGNVTTTDPE YRPGAMATFS CLPGYALEPP 501 550 ENSTTRP00000005169/1-909 GPPNAIECVD PTEPHWNDTE PACKAMCGGE LSEPAGVVLS PDWPQSYSPG ENSP00000312550/1-910 GPPNAIECVD PTEPHWNDTE PACKAMCGGE LSEPAGVVLS PDWPQSYSPG ENSBTAP00000010460/1-910 GPPNVIECVD PTEPHWNDTE PACKAMCGGE LSEPAGVVLS PDWPQSYSPG bmy_00770T0/1-923 GPPNAIECVD PTEPHWNDTE PACKAMCGGE LSEPAGVVLS PDWPQSYSPG BACU011915/1-923 GPPNAIECVD PTEPHWNDTE PACKAMCGGE LSEPAGVVLS PDWPQSYSPG 551 600 ENSTTRP00000005169/1-909 QDCVWGLHVQ EEKRILLQVE ILNVREGDML TLFDGDGPSA RVLAQLRGPQ ENSP00000312550/1-910 QDCVWGVHVQ EEKRILLQVE ILNVREGDML TLFDGDGPSA RVLAQLRGPQ ENSBTAP00000010460/1-910 QDCVWGLHVQ EEKRILLQVE ILNVREGDML TLFDGDGPSA RVLAQLRGPQ bmy_00770T0/1-923 QDCVWGLHVQ EEKRILLQVE ILNVREGDML TLFDGDGPSA RVLAQLRGPQ BACU011915/1-923 QDCVWGLHVQ EEKRILLQVE ILNVREGDML TLFDGDGPSA RVLAQLRGPQ 601 650 ENSTTRP00000005169/1-909 PRRRLLSSGP DLTLQFQAPP GPPNPGLGQG FVLHFKEVPR NDTCPELPPP ENSP00000312550/1-910 PRRRLLSSGP DLTLQFQAPP GPPNPGLGQG FVLHFKEVPR NDTCPELPPP ENSBTAP00000010460/1-910 PRRRLLSSGS DLTLQFQAPP GPPNPGLGQG FVLHFKEVPR NDTCPELPPP bmy_00770T0/1-923 PRRRLLSSGP DLTLQFQAPP GPPNPGLGQG FVLHFKEVPR NDTCPELPPP BACU011915/1-923 PRRRLLSSGP DLTLQFQAPP GPPNPGLGQG FVLHFKEVPR NDTCPELPPP 651 700 ENSTTRP00000005169/1-909 EWGWRTASHG DLIRGTVLTY QCEPGYELLG SDILTCQWDL SWSAAPPACR ENSP00000312550/1-910 EWGWRTASHG DLIRGTVLTY QCEPGYELLG SDILTCQWDL SWSAAPPACQ ENSBTAP00000010460/1-910 EWGWRTASHG DLIRGTVLTY QCEPGYELLG SDILTCQWDL SWSAAPPACQ bmy_00770T0/1-923 EWGWRTASHG DLIRGTVLTY QCEPGYELLG SDILTCQWDL SWSAAPPACQ BACU011915/1-923 EWGWRTASHG DLIRGTVLTY QCEPGYELLG SDILTCQWDL SWSAAPPACQ 701 750 ENSTTRP00000005169/1-909 KIMTCADPGE ITNGHRTTSD AGFPVGSHVQ YRCLPGYSLE GAAVLTCYSR ENSP00000312550/1-910 KIMTCADPGE IANGHRTASD AGFPVGSHVQ YRCLPGYSLE GAAMLTCYSR ENSBTAP00000010460/1-910 KIMTCADPGE ITNGHRTTSD AGFPVGSHVQ YRCLPGYSLE GAAVLTCYSR bmy_00770T0/1-923 KIMTCADPGE ITNGHRTTSD AGFPVGSHVQ YRCLPGYSLE GAAVLTCYSR BACU011915/1-923 KIMTCADPGE ITNGHRTTSD AGFPVGSHVQ YRCLPGYSLE GAAVLTCYSR 751 800 ENSTTRP00000005169/1-909 DTGTPKWSDR VPKCALKYEP CLNPGVPENG YQTLYKHHYQ AGESLRFFCY ENSP00000312550/1-910 DTGTPKWSDR VPKCALKYEP CLNPGVPENG YQTLYKHHYQ AGESLRFFCY ENSBTAP00000010460/1-910 DTGTPKWSDR VPKCALKYEP CLNPGVPENG YQTLYKHHYQ AGESLRFFCY bmy_00770T0/1-923 DTGTPKWSDR VPKCALKYEP CLNPGVPENG YQTLYKHHYQ AGESLRFFCY BACU011915/1-923 DTGTPKWSDR VPKCALKYEP CLNPGVPENG YQTLYKHHYQ AGESLRFFCY 801 850 ENSTTRP00000005169/1-909 EGFELIGEVT ITCVPGHPSQ WTSQPPLCK- ---------- --VSQTTDPS ENSP00000312550/1-910 EGFELIGEVT ITCVPGHPSQ WTSQPPLCK- ---------- --VTQTTDPS ENSBTAP00000010460/1-910 EGFELIGEVT ITCVPGHPSQ WTSQPPLCK- ---------- --VTQTTDPS bmy_00770T0/1-923 EGFELIGEVT ITCVPGHPSQ WTSQPPLCKV AYEELLDNRK LEVTQTTDPS BACU011915/1-923 EGFELIGEVT ITCVPGHPSQ WTSQPPLCKV AYEELLDNRK LEVTQTTDPS 851 900 ENSTTRP00000005169/1-909 RQLEGGNLAL AILLPLGLVI VLGSGVYIYY TKLQGKSLFG FSGSHSYSPI ENSP00000312550/1-910 RQLEGGNLAL AILLPLGLVI VLGSGVYIYY TKLQGKSLFG FSGSHSYSPI ENSBTAP00000010460/1-910 RQLEGGNLAL AILLPLGLVI ILGSGVYIYY TKLQGKSLFG FSGSHSYSPI bmy_00770T0/1-923 RQLEGGNLAL AILLPLGLVI VLGSGVYIYY TKLQGKSLFG FSGSHSYSPI BACU011915/1-923 RQLEGGNLAL AILLPLGLVI VLGSGVYIYY TKLQGKSLFG FSGSHSYSPI 901 950 ENSTTRP00000005169/1-909 TVESDFSNPL YEAGDTREYE VSI ENSP00000312550/1-910 TVESDFSNPL YEAGDTREYE VSI ENSBTAP00000010460/1-910 TVESDFSNPL YEAGDTREYE VSI bmy_00770T0/1-923 TVESDFSNPL YEAGDTREYE VSI BACU011915/1-923 TVESDFSNPL YEAGDTREYE VSI