KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:41:13 2014 Check: 00 .. Name: ENSP00000373331/1-351 Len: 399 Check: 8278 Weight: 1.00 Name: ENSBTAP00000010478/1-344 Len: 399 Check: 3626 Weight: 1.00 Name: ENSTTRP00000007137/1-352 Len: 399 Check: 1940 Weight: 1.00 Name: bmy_00444T0/1-356 Len: 399 Check: 4783 Weight: 1.00 Name: BACU019325/1-352 Len: 399 Check: 2803 Weight: 1.00 // 1 50 ENSP00000373331/1-351 ---------- ---------- ---------- ---------- -------MRA ENSBTAP00000010478/1-344 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007137/1-352 ---------- ---------- ---------- ---------- -------MRT bmy_00444T0/1-356 QTRISSSRSL AKAKLRLLTA LSLAIPIDSQ SDQSARCGAS LGSPSGHMLT BACU019325/1-352 ---------- ---------- ---------- ---------- -------MLT 51 100 ENSP00000373331/1-351 VLAREMDGRR VLGRFWSGWR RGLGVRPVPE DAGFGTEARH QRQPRGSCQR ENSBTAP00000010478/1-344 -----MGGWR VLGQASGGWR RGLGIRATST AAGFGTKARH QLQRRGASKP ENSTTRP00000007137/1-352 VLAPEMGGCR VLRQVSGGWR RGSGDPAART ASSYGTEARH QQQRRGSSKR bmy_00444T0/1-356 VLAPEMGGCR VLGQVWGGWR RGPGVRAAPT ASSFGTEARH QQQHRGSSKR BACU019325/1-352 VLAPEMGGCR VLGQVWGGWR RGPGVRAAPT ASSFGTEARH QQQRRGSSKR 101 150 ENSP00000373331/1-351 SGPLGDQPFA GLL-PKNLSR EELVDALRAA VVDRKGPLVT LNKPQGLPVT ENSBTAP00000010478/1-344 SDPPGDQPFP GLLRPGTFSR EELVDVLRAA VVDRKGPLVT LNKPQGLPVT ENSTTRP00000007137/1-352 SGPRDDQPFS GLLRPENVSR EELVDVLRAA VVDQKGPLVT LNKPLGLPVT bmy_00444T0/1-356 SGPLDDQPFS GLLRPENLSR EELVDVLRAA VVDQK----- ---------- BACU019325/1-352 SGPLDDQPFS GLLRPENLSR EELVDVLRAA VVDQKGPLVT LNKPQGLPVT 151 200 ENSP00000373331/1-351 GKPGELTLFS VLPELSQSLG LREQELQVVR ASGKESSGLV LLSSCPQTAS ENSBTAP00000010478/1-344 GKPGELTLLS VLPELSRSLG LGEQEVQVVR ASGKEASGLV LLSSCSQTAS ENSTTRP00000007137/1-352 GKPGELTLLS VLPELSQSLG LGERELQVVR ASGKETSGLV LLSSCPQTAS bmy_00444T0/1-356 GKPGELTLLS VLPELSQSLG LGERELQVVR ASGN------ ----CPQTAS BACU019325/1-352 GKPGELTLLS VLPELSQSLG LGERELQVVR ASGKETSGLV LLSSCPQTAS 201 250 ENSP00000373331/1-351 RLQKYFTHAR RAQRPTATYC AVTDGIPAAS EGKIQAALKL EHIDGVNLTV ENSBTAP00000010478/1-344 RLQKFFTHSR RARKPTATYC AVTDGIPVTS EGKIQAALKL EHIDGVNLVV ENSTTRP00000007137/1-352 HLQKFFTHSQ RARRPTVTYC AVTDGIPATS EGKIQAALKL EHIDGVNLVV bmy_00444T0/1-356 RLQKFFTHSQ RARRPTVTYC AVTDGIPATS EGTIQAALKL EHIDGVNLVV BACU019325/1-352 RLQKFFTHSQ RARRPTVTYC AVTDGIPATS EGTIQAALKL EHTDGVNLVV 251 300 ENSP00000373331/1-351 PVKAPSRKDI LEGVKKTLSH FRVVATGSGC ALVQLQPLTV FSSQLQVHMV ENSBTAP00000010478/1-344 PVQSPSRKDI MEGVKRTLSH FRVVATGSGC ALVQLQPLTV FPSQLQAHMA ENSTTRP00000007137/1-352 PVKSPSRKDI LEGVKRTLSY FRVVAMGSGC ALVQLQPLTA FPSQLQAHMA bmy_00444T0/1-356 PVKSPSRKDI LEGVKRTLSY FRVVATGSGC ALVQLQPLTA FPSQLQAHMA BACU019325/1-352 PVKSPSRKDI LEGVKRTLSY FRVVATGSGC ALVQLQPLTA FPSQLQAHMA 301 350 ENSP00000373331/1-351 LQLCPVLGDH MYSARVGTVL GQRFLLPAEN NKPQRQVLDE ALLRRLHLTP ENSBTAP00000010478/1-344 LQLCPVLGDH TYSARVGTVL GQRFLLPVES TKPQRQVLDE ALLGRLCLTA ENSTTRP00000007137/1-352 LQLCPLLGDH MYSARVATVL GQRFLLPAES TRPQRQVLDE ALLRRLHLTP bmy_00444T0/1-356 LQLCPLLGDH THSARVAT-- ---------- ------VLDE ALLSRLHLTP BACU019325/1-352 LQLCPLLGDH THSARVATVL GQRFLLPAES TRPQRQVLDE ALLSRLHLTP 351 400 ENSP00000373331/1-351 SQAAQLPLHL HLHRLLLPGT RARDTPVELL APLPPYFSRT LQCLGLRLQ ENSBTAP00000010478/1-344 SQAARLPLHL HLHCLRLPGA RPRDPPIELL APLPSYFSRT LQCLGLHYQ ENSTTRP00000007137/1-352 SQAAQLPLHL HLHCLYLPGA RPRDPPIKLL APLPSYFSRT LHCLGLHYQ bmy_00444T0/1-356 SQAAQLPLHL HLHCLYLPGA RPRDPPIKLL APLPSYFSRT LHCLGLHYQ BACU019325/1-352 SQAAQLPLHL HLHCLYLPGT RPRDPPIKLL APLPSYFSRT LHCLGLHYQ