KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:41:14 2014 Check: 00 .. Name: bmy_12342T0/1-430 Len: 523 Check: 2048 Weight: 1.00 Name: ENSP00000265605/1-487 Len: 523 Check: 7983 Weight: 1.00 Name: ENSTTRP00000003483/1-487 Len: 523 Check: 8579 Weight: 1.00 Name: ENSBTAP00000010485/1-487 Len: 523 Check: 6575 Weight: 1.00 // 1 50 bmy_12342T0/1-430 MSSPMVGTRA LLMLENFIDG KFLPCSSYLD SYDPSTGEVY CRVPNSGKEE ENSP00000265605/1-487 ----MAGTNA LLMLENFIDG KFLPCSSYID SYDPSTGEVY CRVPNSGKD- ENSTTRP00000003483/1-487 ----MAGTRA LLMLENFIDG KFLPCSSYLD SYDPSTGEVY CRVPNSGKE- ENSBTAP00000010485/1-487 ----MAGRGG LLMLENFIGG KFLPCSSYLD SYDPSTGEVY CHVPNSGKE- 51 100 bmy_12342T0/1-430 VSTFTQRRLK STLPVGDLCN SIRRPSSVCS PEIEAAVEAA RAAFPGWSSW ENSP00000265605/1-487 ---------- ---------- ---------- -EIEAAVKAA REAFPSWSSR ENSTTRP00000003483/1-487 ---------- ---------- ---------- -EIEAAVEAA RAAFPGWSSR ENSBTAP00000010485/1-487 ---------- ---------- ---------- -EVEAAVEAA RAAFPGWSSR 101 150 bmy_12342T0/1-430 SPQERSQVLQ RLADLLEQSL EELAQAESRD QGKTLTLART MDIPRSVQNF ENSP00000265605/1-487 SPQERSRVLN QVADLLEQSL EEFAQAESKD QGKTLALART MDIPRSVQNF ENSTTRP00000003483/1-487 SPQERSQVLQ RLADLLEQSL EELAQAESRD QGKTLTLART MDIPRSVQNF ENSBTAP00000010485/1-487 SPQERSQVLQ RLADLLEQSL EELAQAESKD QGKTITLART MDIPRAVHNF 151 200 bmy_12342T0/1-430 RFFASSILHH TSECTQMDHL GCLHYTVRTP VGIG------ -------SW- ENSP00000265605/1-487 RFFASSSLHH TSECTQMDHL GCMHYTVRAP VGVAGLISPW NLPLYLLTWK ENSTTRP00000003483/1-487 RFFASSILHH TSECTQMDHL GCLHYTVRTP VGIAGLISPW NLPLYLLTWK ENSBTAP00000010485/1-487 RFFASSILHH TSECTQMDHL GCLHYTVRAP VGIAALISPW NLPLYLLTWK 201 250 bmy_12342T0/1-430 -SDQSLESAP LLADLEDGSS DRCWQHC--- ---------- ---------- ENSP00000265605/1-487 IAPAMAAGNT VIAKPSELTS VTAWMLCKLL DKAGVPPGVV NIVFGTGPRV ENSTTRP00000003483/1-487 LAPAIAAGNT VIAKPSELTS VTAWMMCKLL EKAGVPPGVV NIVFGTGPRV ENSBTAP00000010485/1-487 IAPAIAAGNT VIAKPSELTS VTAWMMCRLL EKAGVPPGVV NIVFGTGPRV 251 300 bmy_12342T0/1-430 ---------- --------DS QAQR-----A DFCDRV---- ---------- ENSP00000265605/1-487 GEALVSHPEV PLISFTGSQP TAERITQLSA PHCKKLSLEL GGKNPAIIFE ENSTTRP00000003483/1-487 GEALVSHPEV PLISFTGSQP TAERITQLSA PHCKKLSLEL GGKNPAIIFE ENSBTAP00000010485/1-487 GEALVSHPEV PLISFTGSQP TAERIMQLSA PHCKKLSLEL GGKNPAVIFE 301 350 bmy_12342T0/1-430 ---------- ---DDVQTPG E-----SRIF VQKSIYSEFL KRFVEATRMW ENSP00000265605/1-487 DANLDECIPA TVRSSFANQG EICLCTSRIF VQKSIYSEFL KRFVEATRKW ENSTTRP00000003483/1-487 DANLEECVPT TVRSSFANQG EICLCTSRIF VQKSIYSEFL KRFVEATRMW ENSBTAP00000010485/1-487 DANLAECIPT TVRSSFANQG EICLCTSRIF VQRSIYSEFL KRFVEAARMW 351 400 bmy_12342T0/1-430 KVGIPSDPSA DMGALISKAH LEKVRSYIKK ARLEGAQILC GEGVDKLNLP ENSP00000265605/1-487 KVGIPSDPLV SIGALISKAH LEKVRSYVKR ALAEGAQIWC GEGVDKLSLP ENSTTRP00000003483/1-487 KVGIPSDPSA DMGALISKAH LEKVRSYIKK ARMEGAQILC GEGVDKLNLP ENSBTAP00000010485/1-487 KVGIPSDPSA DMGALISKAH LEKVRSYIKK ARMEGAQILC GEGVDKLNLP 401 450 bmy_12342T0/1-430 PRNQAGYFML PTVITDIKDE SCCMKEEIFG PVTCVVPFDS EEEVIQRANS ENSP00000265605/1-487 ARNQAGYFML PTVITDIKDE SCCMTEEIFG PVTCVVPFDS EEEVIERANN ENSTTRP00000003483/1-487 LRNRAGYFML PTVITDIKDE SCCMKEEIFG PVTCVVPFDS EEEVIQRANS ENSBTAP00000010485/1-487 PRNQAGYFML PTVITDVKDE SCCMKEEIFG PVTCVVPFDS EEEVIQRANN 451 500 bmy_12342T0/1-430 VKYGLAATVW SGNVGRVHRV AKKLQSGLVW TNCWLIRELN LPFGGMKSSG ENSP00000265605/1-487 VKYGLAATVW SSNVGRVHRV AKKLQSGLVW TNCWLIRELN LPFGGMKSSG ENSTTRP00000003483/1-487 VKYGLAATVW SGNVGRVHRV AKKLQSGLVW TNCWLIRELN LPFGGMKSSG ENSBTAP00000010485/1-487 VKYGLAATVW SGNVGRVHRV AKKLQSGLVW TNCWLIRELN LPFGGMKSSG 501 550 bmy_12342T0/1-430 VGREGAKDSY EFFTEIKTIT IKH ENSP00000265605/1-487 IGREGAKDSY DFFTEIKTIT VKH ENSTTRP00000003483/1-487 VGREGAKDSY EFFTEIKTIT IKH ENSBTAP00000010485/1-487 VGREGAKDSY EFFTEVKTIT VKH