KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:41:18 2014 Check: 00 .. Name: ENSBTAP00000010504/1-321 Len: 363 Check: 8873 Weight: 1.00 Name: ENSP00000261172/1-322 Len: 363 Check: 2664 Weight: 1.00 Name: ENSTTRP00000001255/1-321 Len: 363 Check: 8418 Weight: 1.00 Name: bmy_04649T0/1-330 Len: 363 Check: 6713 Weight: 1.00 Name: BACU018476/1-321 Len: 363 Check: 9831 Weight: 1.00 // 1 50 ENSBTAP00000010504/1-321 MKALARLIVG LLILDAAVTA PTLESINYNS ETYDATLEDL DHLYNYENIP ENSP00000261172/1-322 MKTLAGLVLG LVIFDAAVTA PTLESINYDS ETYDATLEDL DNLYNYENIP ENSTTRP00000001255/1-321 MKTLARLVLG LVILDAAVTA PTLESINYDS ETYDATLEDL DNLYNYENIP bmy_04649T0/1-330 MKTLARLVLG LVVLDAAVTA PTLESINYDS ETYDATLEDL DNLYNYENIP BACU018476/1-321 MKTLARLVLG LVVLDAAVTA PTLESINYDS GTYDATLEDL DNLYNYENIP 51 100 ENSBTAP00000010504/1-321 MGRAE----- ---------- ---------- ---------- ------IEIA ENSP00000261172/1-322 VDKVE----- ---------- ---------- ---------- ------IEIA ENSTTRP00000001255/1-321 MGQAE----- ---------- ---------- ---------- ------IEIA bmy_04649T0/1-330 MGQAELENQP QQIPELKLLL MFLMPVVLGR LGTTGCQVLP QGNRALIEIA BACU018476/1-321 MGQAE----- ---------- ---------- ---------- ------IEIA 101 150 ENSBTAP00000010504/1-321 TVMPSGNREL LTPPPQPEEA -EEEEEEEST PRLIDGSSPQ EPEFTGVLGP ENSP00000261172/1-322 TVMPSGNREL LTPPPQPEKA QEEEEEEEST PRLIDGSSPQ EPEFTGVLGP ENSTTRP00000001255/1-321 TAIPSGNREL LTPPLQPKDA -EEEEEEEST PRLIDGSSPQ EPEFPGVLGP bmy_04649T0/1-330 TVIPSGNREL LTPPPQPKEA -EEEEEEEST PRLIDGSSPQ EPEFPGVLGP BACU018476/1-321 TVIPSGNREL LTPPPQPKEA -EEEEEEEST PRLIDGSSPQ EPEFPGVLGP 151 200 ENSBTAP00000010504/1-321 QTNEDFPTCL LCTCISTTVY CDDHELDAIP PLPKNTAYFY SRFNRIKKIN ENSP00000261172/1-322 HTNEDFPTCL LCTCISTTVY CDDHELDAIP PLPKNTAYFY SRFNRIKKIN ENSTTRP00000001255/1-321 HTNEDFPTCL LCTCISTTVY CDDHELDAIP PLPKNTAYFY SRFNRIKKIN bmy_04649T0/1-330 HTNEDFPTCL LCTCISTTVY CDDHELDAIP PLPKNTAYFY SRFNRIKKIN BACU018476/1-321 HTNEDFPTCL LCTCISTTVY CDDHELDAIP PLPKNTAYFY SRFNRIKKIN 201 250 ENSBTAP00000010504/1-321 KNDFASLNDL RRIDLTSNLI SEIDEDAFRK LPQLRELVLR DNKIRQLPEL ENSP00000261172/1-322 KNDFASLSDL KRIDLTSNLI SEIDEDAFRK LPQLRELVLR DNKIRQLPEL ENSTTRP00000001255/1-321 RNDFASLNDL RKIDLTSNLI SEIDEDAFRK LPRLRELVLR DNKIRQLPEL bmy_04649T0/1-330 RNDFASLNDL RRIDLTSNLI SEIDEDAFRK LPQLRELVLR DNKIRQLPEL BACU018476/1-321 RNDFASLNDL RRIDLTSNLI SEIDEDAFRK LPQLRELVLR DNKIRQLPEL 251 300 ENSBTAP00000010504/1-321 PTTLRFIDIS NNRLGRKGIK QEAFKDMYDL HHLYLTDNNL DHIPLPLPEN ENSP00000261172/1-322 PTTLTFIDIS NNRLGRKGIK QEAFKDMYDL HHLYLTDNNL DHIPLPLPEN ENSTTRP00000001255/1-321 PTTLTFIDIS NNRLGRKGIK QEAFKDMYDL HHLYLSDNNL EHIPLPLPEN bmy_04649T0/1-330 PTTLTFIDIS NNRLGRKGIK QEAFK----- ---------- ---------- BACU018476/1-321 PTTLTYIDIS NNRLGRKGIK QEAFKDMYDL HHLYLSDNNL EHIPLPLPEN 301 350 ENSBTAP00000010504/1-321 LRALHLQNNN IMEMHEDTFC NVKNLTYIRK ALEDIRLDGN PINLSKTPQA ENSP00000261172/1-322 LRALHLQNNN ILEMHEDTFC NVKNLTYIRK ALEDIRLDGN PINLSKTPQA ENSTTRP00000001255/1-321 LRALHLQNNN ILEMREDTFC NVKNLTYIRK ALEDIRLDGN PINLSKTPQA bmy_04649T0/1-330 -------NNN ILEMHEDTFC NVKNLTYIRK ALEDIRLDGN PINLSKTPQA BACU018476/1-321 LRALHLQNNN ILEMHEDTFC NVKNLTYIRK ALEDIRLDGN PINLSKTPQA 351 400 ENSBTAP00000010504/1-321 YMCLPRLPIG SLV ENSP00000261172/1-322 YMCLPRLPVG SLV ENSTTRP00000001255/1-321 YICLPRLPIG NLV bmy_04649T0/1-330 YMCLPRLPIG SLV BACU018476/1-321 YMCLPRLPIG SLV