KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:41:20 2014 Check: 00 .. Name: bmy_10511T0/1-535 Len: 666 Check: 5376 Weight: 1.00 Name: ENSTTRP00000014016/1-582 Len: 666 Check: 361 Weight: 1.00 Name: BACU020246/1-590 Len: 666 Check: 4731 Weight: 1.00 Name: ENSP00000356505/1-526 Len: 666 Check: 9940 Weight: 1.00 Name: ENSBTAP00000010525/1-527 Len: 666 Check: 3023 Weight: 1.00 // 1 50 bmy_10511T0/1-535 ---------- ---------- ----MLYMQP --------WK TLILXFXQKP ENSTTRP00000014016/1-582 GSPARGDQLT PPGLHLTMSL AETISLWNEG VLAADKKDWK GALDAFTAVQ BACU020246/1-590 -PAWGDTGSP PPALHLTMSL VETISLWNEG VLAADKKDWR GALDAFTAVQ ENSP00000356505/1-526 ---------- -------MSL VEAISLWNEG VLAADKKDWK GALDAFSAVQ ENSBTAP00000010525/1-527 ---------- -------MSL AEAISLWNEG VLAADKKDWK GALDAFTGVQ 51 100 bmy_10511T0/1-535 SLQGRYA--- ---ELLLGAT TRRSSEDFQD VD-----AVD YLNG------ ENSTTRP00000014016/1-582 DPHSRICFNI GCLHTILGSM PEAEKAFTES INRDKHLAVA YFQRGMLYYQ BACU020246/1-590 DPHSRICFNI GCLHTILGSM PEAEKAFTQS IHRDKHLAVA YFQRGMLYYQ ENSP00000356505/1-526 DPHSRICFNI GCMYTILKNM TEAEKAFTRS INRDKHLAVA YFQRGMLYYQ ENSBTAP00000010525/1-527 DPHSRICFNV GCIYTILGNL PEAEKAFTKS INRDKHLAVS YFQRGMLYYQ 101 150 bmy_10511T0/1-535 ---YDSALKD LKEALTQLRG NQLIDYKILG LPFKLFACEV LYNIAFMYAK ENSTTRP00000014016/1-582 MEKYDSALKD LKEALTQLRG NQLIDYKILG LPFKLFACEV LYNIAFMYAK BACU020246/1-590 MEKYDSALKD LKEALTQLRG NQLIDYKILG LPFKLFACEV LYNIAFMYAK ENSP00000356505/1-526 TEKYDLAIKD LKEALIQLRG NQLIDYKILG LQFKLFACEV LYNIAFMYAK ENSBTAP00000010525/1-527 MEKYDSAIKD LKEALTQLRG NQLIDYKILG LQFKLFACEV LYNIAFMYAK 151 200 bmy_10511T0/1-535 KEEWKKAEEH LALAVNMKSE PRHSKIDKAM ESVW------ ---------- ENSTTRP00000014016/1-582 KEEWKKAEEH LALAVSMKSE PRHSKIDKAM ESVWXXXXXX XXXXXXXXXX BACU020246/1-590 KEEWKKAEEH LALAVSMKSE PRHSKIDKAM ESVWKQKLYE PVVIPVGRLF ENSP00000356505/1-526 KEEWKKAEEQ LALATSMKSE PRHSKIDKAM ECVWKQKLYE PVVIPVGKLF ENSBTAP00000010525/1-527 REEWKKAEEH LALAVSMKSE PRHSKIDRAM ESVWKQKLYE PVVIPVGRLF 201 250 bmy_10511T0/1-535 ------VSAL GKQVAGGFAW VVASVVDHDS FSGFAPLQPQ A--------- ENSTTRP00000014016/1-582 XXXXXQVAQL VKKDYLGKVT VVASVVDQDS FSGFAPLQPQ VRWSVLLGPQ BACU020246/1-590 QPNEKQVAQL VKKDYLGKAT VVASVVDQDS FSGFAPLQPQ VRRSCRQAP- ENSP00000356505/1-526 RPNERQVAQL AKKDYLGKAT VVASVVDQDS FSGFAPLQPQ A--------- ENSBTAP00000010525/1-527 RPNEKQVAQL VKKDYLGKAT VVASVVDQDS FSGFAPLQPQ A--------- 251 300 bmy_10511T0/1-535 ---------- -------AE- -----PPPRP KT-------- ---------- ENSTTRP00000014016/1-582 AGSGSPGQLE VELEGAWSEG SMAIVAGPRQ GMG------- ---------- BACU020246/1-590 -CSGSPGQLE VELEGAWSE- -----PAARP ATGWDAVQAR QRMGSCILGL ENSP00000356505/1-526 ---------- -------AE- -----PPPRP KT-------- ---------- ENSBTAP00000010525/1-527 ---------- -------AE- -----PPPRP KT-------- ---------- 301 350 bmy_10511T0/1-535 PEIF------ RALEGEAHRV LFGFVPETPE ELQVMPGNIV FVLKKGSDNW ENSTTRP00000014016/1-582 CGLYLVSIPC RALEGEAHRV LFGFVPETPE ELQVMPGNIV FVLKKSSDNW BACU020246/1-590 PPLLPAASPC RALEGEAHRV LFGFVPETPE ELQVMPGNIV FVLKKGSDNW ENSP00000356505/1-526 PEIF------ RALEGEAHRV LFGFVPETKE ELQVMPGNIV FVLKKGNDNW ENSBTAP00000010525/1-527 PEIF------ RALEGEAHRV LFGFVPETPE ELQVMPGNIV FVLKKGNDNW 351 400 bmy_10511T0/1-535 ATVMFNGQVF RGPGVGLGAW DPGSTWQSFL RSSACYPLST VHPPLPMSLG ENSTTRP00000014016/1-582 ATVMFNG--- ---------- ---------- ---------- ---------- BACU020246/1-590 ATVMFNG--- ---------- ---------- ---------- ---------- ENSP00000356505/1-526 ATVMFNG--- ---------- ---------- ---------- ---------- ENSBTAP00000010525/1-527 ATVMFNG--- ---------- ---------- ---------- ---------- 401 450 bmy_10511T0/1-535 CSVVWALMSA SLFPTFWLRG AALQKGLVPC NYLEPAELRI HSQQKPQEET ENSTTRP00000014016/1-582 ---------- ---------- ---QKGLVPC NYLEPAELRI HSQQKPQEET BACU020246/1-590 ---------- ---------- ---QKGLVPC NYLEPAELRI HSQQKPQEET ENSP00000356505/1-526 ---------- ---------- ---QKGLVPC NYLEPVELRI HPQQQPQEES ENSBTAP00000010525/1-527 ---------- ---------- ---QKGLVPC NYLEPVELRI HPQQQPQEET 451 500 bmy_10511T0/1-535 SLESDIPAPP HSSAPGRPQL SPGQKEKKEP K-EVKLSVPT SYTLKVHYKY ENSTTRP00000014016/1-582 SQEADIPGPP SSRAPGRPQL SPGQNEKKEP K-EVKLSVPM SYTLKVHYKY BACU020246/1-590 SLESDIPAPP HSSAPGRPQL SPGQKEKKEP K-EVKLSVPT SYTLKVHYKF ENSP00000356505/1-526 SPQSDIPAPP SSKAPGRPQL SPGQKQKEEP K-EVKLSVPM PYTLKVHYKY ENSBTAP00000010525/1-527 SLESDIPAPP SSSAPGRPQL SPGQKGKEEP KQEIKLSVPK SYTLKVHYKY 501 550 bmy_10511T0/1-535 TVVMETQPGL PYSQVRGMVA KKLELLPEHT ELRYRPQDSS ELVLLSEDSM ENSTTRP00000014016/1-582 TVVLETQPGL PYSQVRDMVA KKLELLPEHT KLSYRPRDSS ELVLLSEDSM BACU020246/1-590 TVVMEIQPGL PYSQVRGLVA KKLELLPEHT ELSYRPRDSS ELVVLSEDSM ENSP00000356505/1-526 TVVMKTQPGL PYSQVRDMVS KKLELRLEHT KLSYRPRDSN ELVPLSEDSM ENSBTAP00000010525/1-527 TVVMETQFRL PYSQVRDMVA KKLDLLPEHT KLSYRRQDSN ELVPLSEFSM 551 600 bmy_10511T0/1-535 KDAWAQAKNC CLTVWCENTV GDQGFPDEXE ETKKSDANNQ TTEAQLKEGS ENSTTRP00000014016/1-582 KDAWAQVKNY CLTVWCENTV GDQGFPDETE ETKKSDANNQ TTEAQLKEGS BACU020246/1-590 KDAWAQAKNY CLTVWCENTV GDQGFPDETE ETQKSDANNQ TTEAQLKEGG ENSP00000356505/1-526 KDAWGQVKNY CLTLWCENTV GDQGFPDEPK ESEKADANNQ TTEPQLKKGS ENSBTAP00000010525/1-527 KDAWAQVKNY CLTLWCENTV GDQGFPDEPE ESKKSDANNQ TTEPELKEGS 601 650 bmy_10511T0/1-535 QVVALFSYEA TQPEDLEFLE GDVILVISMV NEEWLEGECK GKVGIFPKVF ENSTTRP00000014016/1-582 QVVALFSYEA TQPEDLEFLE GDVILVLSMV NEEWLEGECK GKVGIFPKVF BACU020246/1-590 QVVALFSYEA TQPEDLEFLE GDVILVISMV NEEWLEGECK GKVGIFPKVF ENSP00000356505/1-526 QVEALFSYEA TQPEDLEFQE GDIILVLSKV NEEWLEGECK GKVGIFPKVF ENSBTAP00000010525/1-527 KVVALFSYEA TQPEDLEFLE GDVILVISTV NEEWLEGECK GKVGIFPKAF 651 700 bmy_10511T0/1-535 VEERATTDLE STPRGV ENSTTRP00000014016/1-582 VEERTTTDLE STPRGV BACU020246/1-590 VEERATTDLE STPRGV ENSP00000356505/1-526 VEDCATTDLE STRREV ENSBTAP00000010525/1-527 VEQHPTTDLE STPGRV