KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:41:22 2014  Check: 00 ..

 Name: ENSP00000317177/1-252     Len:    253  Check:  6160  Weight:  1.00
 Name: ENSBTAP00000010531/1-220  Len:    253  Check:  4660  Weight:  1.00
 Name: ENSTTRP00000007370/1-231  Len:    253  Check:  7545  Weight:  1.00
 Name: bmy_20078T0/1-221         Len:    253  Check:  5358  Weight:  1.00

//


                          1                                                   50
ENSP00000317177/1-252     MGRLSWQVAA AAAVGLALTL EALPWVLRWL RS-RRRRPRR EALFFPSQVT 
ENSBTAP00000010531/1-220  MRPLRWQVAV VAAAGLALAL ETLPAVLRWL WV-RRRRPRR EVLFFPSQVT 
ENSTTRP00000007370/1-231  MGPLRWQVVA AVVGGLALAL EALPAVLRWL WA-GRRPPRR EVLFFPSQVT 
bmy_20078T0/1-221         MRPLRWQVVA AVAAGLALAL EALPAVLRWL WAGRRRRPRR EVLFFPSQVT 


                          51                                                 100
ENSP00000317177/1-252     CTEALLRAPG AELAELPEGC PCGLPHGESA LSRLLRALLA ARASLDLCLF 
ENSBTAP00000010531/1-220  CTEALLRSPG AT----PSGC PCSLPHGESS LSRLLSALLA ARVSLELCLF 
ENSTTRP00000007370/1-231  CTEALLRVPG TA----PSGC PCNLPHGESS LSRLLRALLA ARASLELCLF 
bmy_20078T0/1-221         CTEALLRVPG AA----PSGC PCSLPHGESS LSRLLRALLA ARASLELCLF 


                          101                                                150
ENSP00000317177/1-252     AFSSPQLGRA VQLLHQRGVR VRVVTDCDYM ALNGSQIGLL RKAGIQVRHD 
ENSBTAP00000010531/1-220  AFSSPQLGRA VQLLHQRGVR VRVVTDCDYM ALNGSQIGLL RKAGIQVRHD 
ENSTTRP00000007370/1-231  AFSSPQLGRA VQLLHQRGVR VRVVTDCDYM ALSGSQIGLL RKAGIQVRHD 
bmy_20078T0/1-221         AFSSPQLGRA VQLLHQRGVR VRVVTDCDYM ALNGSQIGLL RKAGIQVRHD 


                          151                                                200
ENSP00000317177/1-252     QDPGYMHHKF AIVDKRVLIT GSLNWTTQAI QNNRENVLIT EDDEYVRLFL 
ENSBTAP00000010531/1-220  QDLGYMHHKF AIVDRKVLIT GSLNWTTQAI QNNRENVLIV EDEEYVRLFL 
ENSTTRP00000007370/1-231  QDLGYMHHKF AIVDKKVLIT GSLNWTTQAI QSNRENVLII EDEECVRLFL 
bmy_20078T0/1-221         QDLGYMHHKF AIVDGKVLIT GSLNWTTQAI QNNRENVLIT EDEEYVRLFR 


                          201                                                250
ENSP00000317177/1-252     EEFERIWEQF NPTKYTFFPP KKSHGSCAPP VSRAGGRLLS WHRTCGTSSE 
ENSBTAP00000010531/1-220  EEFERIWEEF NPTRFSFFPQ KERAR----- ---------- ---------- 
ENSTTRP00000007370/1-231  EEFERIWEEF NPTKYTFFPH KKGSRGRWGR VPRAGA---- ---------- 
bmy_20078T0/1-221         EEFERIWEEF NPAKYTFFPQ NRRCR----- ---------- ---------- 


                          251                                                300
ENSP00000317177/1-252     SQT 
ENSBTAP00000010531/1-220  --- 
ENSTTRP00000007370/1-231  --- 
bmy_20078T0/1-221         ---