KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:41:25 2014 Check: 00 .. Name: BACU002877/1-362 Len: 363 Check: 7366 Weight: 1.00 Name: ENSP00000303366/1-356 Len: 363 Check: 7523 Weight: 1.00 Name: bmy_08378T0/1-335 Len: 363 Check: 294 Weight: 1.00 Name: ENSBTAP00000010569/1-359 Len: 363 Check: 7298 Weight: 1.00 Name: ENSTTRP00000009073/1-355 Len: 363 Check: 3556 Weight: 1.00 // 1 50 BACU002877/1-362 -MATATAAAA TAXXXXXXXX XXXXXXXXLP GPGPGPTTLL LFLLFLGPVA ENSP00000303366/1-356 -------MAA EGWIWRWGWG RRCLGRPGLL GPGPGPTTPL FLLLLLGSVT bmy_08378T0/1-335 MATAAAVAAA AGWVWRWGWG RRCSGRPGLP GPGPGPTTLL LFLLFLGPVA ENSBTAP00000010569/1-359 ----MAAAAA AGWIWRWGWG RRCPGRSGLR GPGPGPTILK LFLLLLGPVA ENSTTRP00000009073/1-355 -------MAA AGWVWRWGWG RRCPGRPGLP GPGPGPTTLL LFLLFLGPVA 51 100 BACU002877/1-362 ADITDGNSEH LKREHSLIKP YHGVGSSSTL LWDFQGSTML TSQYVRLTPD ENSP00000303366/1-356 ADITDGNSEH LKREHSLIKP YQGVGSSSMP LWDFQGSTML TSQYVRLTPD bmy_08378T0/1-335 ADITDGNSEH LKREHSLIKP YHGVGSSSTL LWDFQGSTML TSQYVRLTPD ENSBTAP00000010569/1-359 ADITDGNSEH LKREHSLIKP YHGIGSSSTL LWDFQGSTML TSQYVRLTPD ENSTTRP00000009073/1-355 ADITDGNSEH LKREHSLIKP YHGVGSSSTL LWDFQGSTML TSQYVRLTPD 101 150 BACU002877/1-362 ERSKEGSIWN HLPCFLKDWE MHVHFKVHGA GKKNLHGDGI ALWYTRDRLV ENSP00000303366/1-356 ERSKEGSIWN HQPCFLKDWE MHVHFKVHGT GKKNLHGDGI ALWYTRDRLV bmy_08378T0/1-335 ERSKEGSIWN HLPCFLKDWE MHVHFKVHGA GKKNLHGDGI ALWYTRDRLV ENSBTAP00000010569/1-359 ERSKEGSIWN HLPCFLKDWE MHVHFKVHGA GKKNLHGDGI ALWYTRDRLV ENSTTRP00000009073/1-355 ERSKEGSIWN HLPCFLKDWE MHVHFKVHGA GKKNLHGDGI ALWYTRDRLV 151 200 BACU002877/1-362 PGPVFGSKDN FHGLAIFLDT YPNDETTERV FPYISVMVNN GSLSYDHSKD ENSP00000303366/1-356 PGPVFGSKDN FHGLAIFLDT YPNDETTERV FPYISVMVNN GSLSYDHSKD bmy_08378T0/1-335 PGPVFGSKDN FHGLAIFLDT YPNDETTERV FPYISVMVNN GSLSYDHSKD ENSBTAP00000010569/1-359 PGPVFGSKDN FHGLAIFLDT YPNDETTERV FPYISVMVNN GSLSYDHSKD ENSTTRP00000009073/1-355 PGPVFGSKDN FHGLAIFLDT YPNDETTERV F-YISVMVNN GSLSYDHSKD 201 250 BACU002877/1-362 GRWTELAGCT ADFRNRDHDT FLAVRYSRGR LTVMTDLEDK NEWKNCIDIT ENSP00000303366/1-356 GRWTELAGCT ADFRNRDHDT FLAVRYSRGR LTVMTDLEDK NEWKNCIDIT bmy_08378T0/1-335 GRWTELAGCT ADFRNRDHDT FLAVRYSRGR LTLDPGLSQV S--------- ENSBTAP00000010569/1-359 GRWTELAGCT ADFRNRDHDT FLAVRYSRGR LTVMTDLEDK NEWKNCIDIT ENSTTRP00000009073/1-355 GRWTELAGCT ADFRNRDHDT FLAVRYSRGR LTVMTDLEDK NEWKNCIDIT 251 300 BACU002877/1-362 GVRLPTGYYF GASAGTGDLS DNHDIISMKL FQLMVEHTPD EENIDWTKIE ENSP00000303366/1-356 GVRLPTGYYF GASAGTGDLS DNHDIISMKL FQLMVEHTPD EESIDWTKIE bmy_08378T0/1-335 ---------- ---------S DNHDIISMKL FQLMVEHTPD EENIDWTKIE ENSBTAP00000010569/1-359 GVRLPTGYYF GASAGTGDLS DNHDIISMKL FQLMVEHTPD EESIDWTKIE ENSTTRP00000009073/1-355 GVRLPTGYYF GASAGTGDLS DNHDIISMKL FQLMVEHTPD EENIDWTKIE 301 350 BACU002877/1-362 PSVNLLKSPK DNVDDPTGNF RSGPLTGWRV FLLLLCALLG IIVCAVVGAV ENSP00000303366/1-356 PSVNFLKSPK DNVDDPTGNF RSGPLTGWRV FLLLLCALLG IVVCAVVGAV bmy_08378T0/1-335 PSVNLLKSPK DNVDDPTGNF RSGPLTGWRV FLLLLCALLG IIVCAVVGAV ENSBTAP00000010569/1-359 PSVNFLKSPK DNVDDPTGNF RSGPLTGWRV FLLLLCALLG IIVCAVVGAV ENSTTRP00000009073/1-355 PSVNLLKSPK DNVDDPTGNF RSGPLTGWRV FLLLLCALLG IIVCAVVGAV 351 400 BACU002877/1-362 VFQKRQERNK RFY ENSP00000303366/1-356 VFQKRQERNK RFY bmy_08378T0/1-335 VFQKRQERNK RFY ENSBTAP00000010569/1-359 VFQKRQERNK RFY ENSTTRP00000009073/1-355 VFQKRQERNK RFY