KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:41:26 2014 Check: 00 .. Name: BACU002759/1-104 Len: 363 Check: 5290 Weight: 1.00 Name: ENSP00000348459/1-336 Len: 363 Check: 9870 Weight: 1.00 Name: bmy_22322T0/1-247 Len: 363 Check: 9716 Weight: 1.00 Name: ENSBTAP00000010575/1-336 Len: 363 Check: 5879 Weight: 1.00 Name: ENSTTRP00000000372/1-343 Len: 363 Check: 5633 Weight: 1.00 // 1 50 BACU002759/1-104 ---------- ---------- ---------- ---------- ---------- ENSP00000348459/1-336 ---------- ---------- ---MKIDIHS HILPKEWPDL KKRFGYGGWV bmy_22322T0/1-247 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010575/1-336 ---------- ---------- ---MKIDIHT HILPREWPDL KKRFGYGGWV ENSTTRP00000000372/1-343 AWFSRPLHIK TSFFTCVFSD PVEMKIDIHS HILPKEWPDL KKRFGYGGWV 51 100 BACU002759/1-104 ---------- ---------- ---------- ---------- MTVSSSRNVP ENSP00000348459/1-336 QLQHHSKGEA KLLKDGKVFR VVRENCWDPE VRIREMDQKG VTVQALSTVP bmy_22322T0/1-247 ---------- -MLKDGKVFR VVQENCWDPE VRLREMDQTG VTVQALSTVP ENSBTAP00000010575/1-336 QLQHNGKGEA KMLKDGKVFR VVQENCWDPE ARLREMDQTG VTVQALSTVP ENSTTRP00000000372/1-343 QLQHHGKGEA KMLKDGKVFR VVQENCWDPE VRLREMDQTG VTVQALSTVP 101 150 BACU002759/1-104 T--------- ---------- ---------- ---------- ---------- ENSP00000348459/1-336 VMFSYWAKPE DTLNLCQLLN NDLASTVVSY PRRFVGLGTL PMQAPELAVK bmy_22322T0/1-247 VMFSYWAKPQ DTLELCQLLN NDLAATVASH PRRFVGLGTL PMQAPELAVK ENSBTAP00000010575/1-336 VMFSYWAKPQ DTLDLCQLLN NDLAATIASH PRRFVGLGTL PMQAPELAVK ENSTTRP00000000372/1-343 VMFSYWAKPQ DTLELCQLLN NDLAATVASH PRRFVGLGTL PMQAPELAVK 151 200 BACU002759/1-104 ---------- ---------- ---------- ---------- ---------- ENSP00000348459/1-336 EMERCVKELG FPGVQIGTHV NEWDLNAQEL FPVYAAAERL KCSLFVHPWD bmy_22322T0/1-247 ELERCVKELG FPGVQIGSHI NEWDLNAEEL FPVYAEAEKL NCSLFVHPWD ENSBTAP00000010575/1-336 EMERCVRKLG FPGVQIGSHI NEWDLNAREL FPVYAEAERL NCSLFVHPWD ENSTTRP00000000372/1-343 ELERCVKELG FPGVQIGSHI NEWDLNAQEL FPVYAEAEKL NCSLFVHPWD 201 250 BACU002759/1-104 ---------- ---------- ETTTAICSMI MSGVFEKFPK RKVCFAHGGG ENSP00000348459/1-336 MQMDGRMAKY WLPWLVGMPA ETTIAICSMI MGGVFEKFPK LKVCFAHGGG bmy_22322T0/1-247 MQMDGRMAKY WFPWLIG--- ---------- ---------- ---------G ENSBTAP00000010575/1-336 MQMDGRMAKY WFPWLIGMPA ETTAAICSMI MGGVFEKFPK LKVCFAHGGG ENSTTRP00000000372/1-343 MQMDGRMAKY WFPWLIGMPA ETTTAICSMI MGGVFEKFPK LKVCFAHGGG 251 300 BACU002759/1-104 SFPFRVGRIS HGFSMRPDLC AQDNPTNPKK YVGSFYTDSL VHDPLALKLL ENSP00000348459/1-336 AFPFTVGRIS HGFSMRPDLC AQDNPMNPKK YLGSFYTDAL VHDPLSLKLL bmy_22322T0/1-247 SFPFTVGRIS HGFSMRPDLC AQDNPTNPKK YLGSFYTDSL VHDPLALKLL ENSBTAP00000010575/1-336 SFPFTVGRIS HGFSMRPDLC AQDNPTNPKK YLGSFYTDSL VHDPLALKLL ENSTTRP00000000372/1-343 SFPYTVGRIS HGFSMRPDLC AQDNPTNPKK YLGSFYTDSL VHDPLALKLL 301 350 BACU002759/1-104 TDVIG----- ---------- ---------- ---------- KC-------- ENSP00000348459/1-336 TDVIGKDKVI LGTDYPFPLG ELEPGKLIES MEEFDEETKN KLKAGNALAF bmy_22322T0/1-247 TDVIG--KVS QGCH----LD DL-------- -------RGA ECRISNQL-- ENSBTAP00000010575/1-336 TDVIGKDKVI LGTDYPFPLG ELEPGKLIES MGEFDAETKD KLKAGNALEF ENSTTRP00000000372/1-343 TDVVGKDKVI LGTDYPF-LR EL-------- -------SGD KLKAGNALKF 351 400 BACU002759/1-104 -----FPSWN G-- ENSP00000348459/1-336 LGLE-RKQFE --- bmy_22322T0/1-247 LGLSLKKGWE KRH ENSBTAP00000010575/1-336 LGLE-RKQFE --- ENSTTRP00000000372/1-343 LGLE-RKQFE ---