KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:41:26 2014 Check: 00 .. Name: ENSP00000414147/1-666 Len: 668 Check: 2551 Weight: 1.00 Name: ENSBTAP00000010577/1-668 Len: 668 Check: 2543 Weight: 1.00 Name: ENSTTRP00000003624/1-666 Len: 668 Check: 9864 Weight: 1.00 Name: bmy_03067T0/1-578 Len: 668 Check: 8968 Weight: 1.00 Name: BACU015762/1-668 Len: 668 Check: 4178 Weight: 1.00 // 1 50 ENSP00000414147/1-666 MEQEPQNGEP AEIKIIREAY KKAFLFVNKG LNTDELGQKE EAKNYYKQGI ENSBTAP00000010577/1-668 MEQGPQDGEP IEIKIIKEAY KKAFVFVNKG LNTDELGQKE EAKNYYKQGI ENSTTRP00000003624/1-666 MEQEPQDGEP AEIKIIKEAY KKAFLFVNKG LNTDELGQKE EAKNYYKQGI bmy_03067T0/1-578 MEQEPQDGEP AEIKIIKEAY KKAFLFVNKG LNTDELGQKE EAKNYYKQGI BACU015762/1-668 MEQEPQDGEP AEIKIIKEAY KKAFLFVNKG LNTDELGQKE EAKNYYKQGI 51 100 ENSP00000414147/1-666 GHLLRGISIS SKESEHTGPG WESARQMQQK MKETLQNVRT RLEILEKGLA ENSBTAP00000010577/1-668 GHLLRGISIS STDPEYTGPE WESARQMQQK MKETLQNVRT RLEILEKGLA ENSTTRP00000003624/1-666 GHLLRGISIS SAGPEHIGPG WESARQMQQK MKETLQNVRT RLEILEKGLA bmy_03067T0/1-578 GHLLRGISIS SADPEHIGPG WESARQMQQK MKETLQNVRT RLEILEKGLA BACU015762/1-668 GHLLRGISIS SADPEHIGPG WESARQMQQK MKETLQNVRT RLEILEKGLA 101 150 ENSP00000414147/1-666 TSLQNDLQEV PKLYPEFPPK DMCEKLPEPQ SFSSAPQHAE VNGNTSTPSA ENSBTAP00000010577/1-668 TSLRNDLQEV PKLYPEFPPK DMSEKSPEPQ SLSSLPQHSE VNGSTSTASA ENSTTRP00000003624/1-666 TSLRNDLQEV PKLYPEFPPK DMSEKSLEPQ SFNSLPQHNE VNGNTSTTST bmy_03067T0/1-578 TSLRNDLQEV PKLYPEFPPK DMSEKSLEPQ SFNSLPQHNE VNGNTSTTST BACU015762/1-668 TSLRNDLQEV PKLYPEFPPK DMSEKSLEPQ SFNSLPQHHE VNGNTSTTST 151 200 ENSP00000414147/1-666 GAVAAPASLS LPSQSCPAEA PPAYTPQAAE GHYTVSYGTD SGEFSSVGEE ENSBTAP00000010577/1-668 ESSSTPTTLS LPCQSHPSEA PPAYTPQAAE GHYTVSYGTE SGEFSSVGEN ENSTTRP00000003624/1-666 ESVSTPSTFS LPSQSHPSEA PPAYTPQAAE GHYTVSYGTE SGEFSSVGEN bmy_03067T0/1-578 ESVSTPSTFS LPSQSHPSEA PPAYTPQAAE GHYTVSYGTE SGEFSSVGEN BACU015762/1-668 ESVSTPSTFS LPSQSHPSEA PPAYTPQAAE GHYTVSYGTE SGEFSSVGEN 201 250 ENSP00000414147/1-666 FYRNHSQPPP LETLGLDADE LILIPNGVQI FFVNPAGEVS APSYPGYLRI ENSBTAP00000010577/1-668 FYRNHSQPPP LETLGLDADE LILIPNGVQI FFVNPAGEVS APSYPGYLRI ENSTTRP00000003624/1-666 FYRNHSQPPP LETLGLDADE LILIPNGVQI FFVNPAGEVS APSYPGYLRI bmy_03067T0/1-578 FYRNHSQPPP LETLGLDADE LILIPNGVQI FFVNPAGEVS APSYPGYLRI BACU015762/1-668 FYRNHSQPPP LETLGLDADE LILIPNGVQI FFVNPAGEVS APSYPGYLRI 251 300 ENSP00000414147/1-666 VRFLDNSLDT VLNRPPGFLQ VCDWLYPLVP DRSPVLKCTA GAYMFPDTML ENSBTAP00000010577/1-668 VRFLDNSLDT FLNRPPGFLQ VCDWLYPLVP DRSPVLKCTV GAYMFPDTML ENSTTRP00000003624/1-666 VRFLDNSLDT VLNRPPGFLQ VCDWLYPLVP DRSPVLKCTI GAYMFPDTML bmy_03067T0/1-578 VRFLDNSLDT VLNRPPGFLQ VCDWLYPLVP DRSPVLKCTV GAYMFPDTML BACU015762/1-668 VRFLDNSLDT VLNRPPGFLQ VCDWLYPLVP DRSPVLKCTV GAYMFPDTML 301 350 ENSP00000414147/1-666 QAAGCFVGVV LSSELPEDDR ELFEDLLRQM SDLRLQANWN RAEEENEFQI ENSBTAP00000010577/1-668 QASGCFVGVV LSSELPEDDR ELFEDLLRQM SDLRLQTNWD RAEGENEFQI ENSTTRP00000003624/1-666 QASGCFVGVV LSSELPEDDR ELFEDLLRQM SDLRLQANWD RAE-ENEFQI bmy_03067T0/1-578 QASGCFVGVV LSSELPEDDR ELFEDLLRQM SDLRLQANWD RAEGENEFQI BACU015762/1-668 QASGCFVGVV LSSELPEDDR ELFEDLLRQM SDLRLQANWD RAEGENEFQI 351 400 ENSP00000414147/1-666 PGRTRPSSDQ LKEASGTDVK QLDQGNKDVR HKGKRGKRAK DTSSEEVNLS ENSBTAP00000010577/1-668 PGISGSASDQ LKEASGTDVR QLDPSSKDVR QKGKRGKKTK GTSSEEVNLS ENSTTRP00000003624/1-666 PGRSRCPSNQ -EEASGTEVR QLDPGSKDVR HNGKRGKKTK GTSSEEVNLS bmy_03067T0/1-578 PGRSRCPSNQ LKEASGTDVR QLDPGSKDVR HKGKRGKKTK GTSSEEVNLS BACU015762/1-668 PGRSRCPSNQ LKEASGTDVR QLDPGSKDVR HKGKRGKKTK GTSSEEVNLS 401 450 ENSP00000414147/1-666 HIVPCEPVPE EKPKELPEWS EKVAHNILSG ASWVSWGLVK GAEITGKAIQ ENSBTAP00000010577/1-668 HIVPCEPVSE EKAKELPEWS EKVAHNILSG ASWVSWGLVK GAEFTGKAIQ ENSTTRP00000003624/1-666 HIVPYEPVSE EKAKELPEWS EKVAQNILSG ASWVSWGLVK GAEFTGKAIQ bmy_03067T0/1-578 HIVPYEPVSE EKAKELPEWS EKVAQNILSG ASWVSWGLVK GAEFTGKAIQ BACU015762/1-668 HIVPYEPVSE EKAKELPEWS EKVAQNILSG ASWVSWGLVK GAEFTGKAIQ 451 500 ENSP00000414147/1-666 KGASKLRERI QPEEKPVEVS PAVTKGLYIA KQATGGAAKV SQFLVDGVCT ENSBTAP00000010577/1-668 KGASKLRERI QPEEKPVEVS PAVTKGLYMA KQATGGAAKV SQFLVDGVCT ENSTTRP00000003624/1-666 KGASKLRERI QPEEKPVEVS PTVTKGLYIA KQATGGAAKV SQFLVDGVCT bmy_03067T0/1-578 KGASKLRERI QPEEKPVEVS PAVTKGLYIA KQATGGAAKV SQFLVDGVCT BACU015762/1-668 KGASKLRERI QPEEKPVEVS PAVTKGLYIA KQATGGAAKV SQFLVDGVCT 501 550 ENSP00000414147/1-666 VANCVGKELA PHVKKHGSKL VPESLKKDKD GKSPLDGAMV VAASSVQGFS ENSBTAP00000010577/1-668 VANCVGKELA PHVKKHGSKL VPESLKKDRN GKSTLDGAMV VAASSVQGFS ENSTTRP00000003624/1-666 VANCVGKELA PHVKKHGSKL VPESLKKDKN GKSTLDGAMV VAASSVQGFS bmy_03067T0/1-578 VANCVGKELA PHVKKHGSKL VPESLKKDKN GKSPLDGAMV VAASSVQGFS BACU015762/1-668 VANCVGKELA PHVKKHGSKL VPESLKKDKN GKSPLDGAMV VAASSVQGFS 551 600 ENSP00000414147/1-666 TVWQGLECAA KCIVNNVSAE TVQTVRYKYG YNAGEATHHA VDSAVNVGVT ENSBTAP00000010577/1-668 TVWQGLECAA KCIVNNVSAE TVQTVRYKYG HTAGEATHNA VDSAINVGVT ENSTTRP00000003624/1-666 TVWQGLECAA KCIVNNVSVE TVQTVRYKYG HTAGEATHNA VDSAINVGVT bmy_03067T0/1-578 TVWQGLECAA KCIVNNVSVE TVQTVRYK-- ---------- ---------- BACU015762/1-668 TVWQGLECAA KCIVNNVSVE TVQTVRYKYG HTAGEATHNA VDSAINVGVT 601 650 ENSP00000414147/1-666 AYNINNIGIK AMVKKTATQT GHTLLEDYQI VDNSQRENQE GAANVNVRGE ENSBTAP00000010577/1-668 AYNIDNIGIK AMVKKTAKQT GHTLLEDYKI IDNSKGENPG GGASANLKGE ENSTTRP00000003624/1-666 AYNIDNVGIK AMVKKTAKQT GHTLLEDYKI VDNSKGENQG GGASVNMKEA bmy_03067T0/1-578 ---------- ---------- ---------- ---------- ---------- BACU015762/1-668 AYNIDNVGIK AMVKKTAKQT GHTLLEDYKI VDNSKGENQG GGASVNMKGE 651 700 ENSP00000414147/1-666 KDEQTK--EV KEAKKKDK ENSBTAP00000010577/1-668 KDEQKEGPEK NGAKKKDK ENSTTRP00000003624/1-666 KDEQREALEK DEAKKKDK bmy_03067T0/1-578 ---------- -------- BACU015762/1-668 KDEQREELEK DGAKKKDK