KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:41:28 2014 Check: 00 .. Name: ENSP00000371686/1-561 Len: 656 Check: 9303 Weight: 1.00 Name: ENSBTAP00000010604/1-558 Len: 656 Check: 892 Weight: 1.00 Name: ENSTTRP00000004631/1-562 Len: 656 Check: 2618 Weight: 1.00 Name: bmy_03764T0/1-655 Len: 656 Check: 3323 Weight: 1.00 Name: BACU009471/1-370 Len: 656 Check: 4843 Weight: 1.00 // 1 50 ENSP00000371686/1-561 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010604/1-558 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004631/1-562 ---------- ---------- ---------- ---------- ---------- bmy_03764T0/1-655 MFLEPTAPSS GRISVTQFGT DPRASIVLCT SQGPGRPGAA LCARELGAAV BACU009471/1-370 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000371686/1-561 ---------- ---------- ---------- ---------- --MADPQAGS ENSBTAP00000010604/1-558 ---------- ---------- ---------- ---------- --MADGQPGP ENSTTRP00000004631/1-562 ---------- ---------- ---------- ---------- --LAVRQPVP bmy_03764T0/1-655 RGQWQVVQLE ELSLASSGNP AAQGPQAERR GLSVGPGEAW CAMAVRQPVP BACU009471/1-370 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000371686/1-561 AAGDWEIDVE SLELEEDVCG APRSTPPGPS PPPADGDCED DED-DDGVDE ENSBTAP00000010604/1-558 AV-DWEIDVE SLELEEDSRG APPPTPPGPS PPPA---YED DDDAEDEDDV ENSTTRP00000004631/1-562 AV-DWEIDVE SLGLEEDGRE APPPTPPGPS PPPPDRDGED DDDAEDEDDD bmy_03764T0/1-655 AV-DWEIDVE SLGLEEDGRE APPPTPPGPS PPPADRDGED DDDAEDEDDD BACU009471/1-370 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000371686/1-561 DAEEEGDGEE AGASPGMPGQ PEQRGGPQPR PPLAPQASPA GTGPRERCTP ENSBTAP00000010604/1-558 DAEDEGDGEE AAASPGVPGR PERQGALAPR PSTAPQASQA PAGPPERGAN ENSTTRP00000004631/1-562 DAEDEGDGEE AGASPGVLGR PEQQDTLAPR PPPVPQASSA GV-PPERGAN bmy_03764T0/1-655 DAEDEGDGEE AGASPGVPGR PEQQDTLAPR PPPAPQASPA PAGPPERGAN BACU009471/1-370 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000371686/1-561 A--GGGAEPR KLSRTPKCAR CRNHGVVSCL KGHKRFCRWR DCQCANCLLV ENSBTAP00000010604/1-558 A--GGGAEPR KLSRTPKCAR CRNHGVVSCL KGHKRFCRWR DCQCANCLLV ENSTTRP00000004631/1-562 AGGGGGAEPR KLSRTPKCAR CRNHGVVSCL KGHKRFCRWR DCQCANCLLV bmy_03764T0/1-655 AGGGGGAEPR KLSRTPKCAR CRNHGVVSCL KGHKRFCRWR DCQCANCLLV BACU009471/1-370 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000371686/1-561 VERQRVMAAQ VALRRQQATE DKKGLSGKQN NFERKAVYQR QVRAPSLLAK ENSBTAP00000010604/1-558 VERQRVMAAQ VALRRQQATE DKKGLSGKQN NFERKAVYQR QVRAPSLLAK ENSTTRP00000004631/1-562 VERQRVMAAQ VALRRQQATE DKKGLSGKQN NFERKAMYQR QVRAPSLLAK bmy_03764T0/1-655 VERQRVMAAQ VALRRQQATE DKKGLSGKQN NFERKAMYQR QVRAPSLLAK BACU009471/1-370 ---------- ---------- ---------- ------MYQR QVRAPSLLAK 301 350 ENSP00000371686/1-561 SILEGYRPIP AETYVGGTFP LPPPVSDRMR KRRAFADKEL ENIMLEREYK ENSBTAP00000010604/1-558 SILEGYRPIP PETYVGGSLP LPPPVSDRMR KRRAFADKEL ENIMLEREYK ENSTTRP00000004631/1-562 SILEGYRPIP SETYVGGSLP LPPPVSDRMR KRRAFADKEL ENIMLEREYK bmy_03764T0/1-655 SILEGYRPIP SETYVGGSLP LPPPVSDRMR KRRAFADKEL ENIMLEREYK BACU009471/1-370 SILEGYRPIP SETYVGGSLP LPPPVSDRMR KRRAFADKEL ENIMLEREYK 351 400 ENSP00000371686/1-561 EREMLETSQA AALFLPNRMV PGPDYNSYKS AYSPSPVEPP SKDFCNFLPT ENSBTAP00000010604/1-558 EREMLEASQA AALFLPNRMV HGSEYSSYKS AYSPTPVEPP SKDFCNFLPT ENSTTRP00000004631/1-562 EREMLEASQA AALFLPNRMV HGSEYNSYKS GYSPTPVETP SKDFCNFLPT bmy_03764T0/1-655 EREMLEASQA AALFLPNRMV HGSEYNSYKS AYSPTPVEPP SKDFCNFLPT BACU009471/1-370 EREMLEASQA AALFLPNRMV HGSEYNSYKS AYSPTPVEPP SKDFCNFLPT 401 450 ENSP00000371686/1-561 CLDLTMQYSG SGNMELISSN VSVATTYRQY PLSSRFLVWP KCGPISDTLL ENSBTAP00000010604/1-558 CLDLTMQYSG SGNMELISSN VSVATTYRQY PLSSRLLVWP KCGPISDTVL ENSTTRP00000004631/1-562 CLDLTMQYSG SGNMELISSN VSVATTYRQY PLSSRFLVWP KCGPISDTLL bmy_03764T0/1-655 CLDLTMQYSG SGNMELISSN VSVATTYRQY PLSSRFLVWP KCGPISDTLL BACU009471/1-370 CLDLTMQYSG SGNMELISSN VSVATTYRQY PLSSRFLVWP KCGPISDTLL 451 500 ENSP00000371686/1-561 YQQCLLNATT SVQALKPGAS WDLKGARVQD GLSAEQDMMP SKLEGSLVLP ENSBTAP00000010604/1-558 YQQCLLNTTT SVQALKPGTS WDLKGVRLQD GLGADHDMMP PKLEGSLVLP ENSTTRP00000004631/1-562 YQQCLLNATT SVQALKPGAS WDLKGVRLHD GLGTDHDIMP PKLEGSLVPP bmy_03764T0/1-655 YQQCLLNATT SVQALKPGAS WDLKGVRLHD GLGADHDMMP PKLEGSLVLP BACU009471/1-370 YQQCLLNATT SVQALKPGAS WDLKGVRLHD GLGADHDMMP PKLEGSLVLP 501 550 ENSP00000371686/1-561 HTPEIQTTRS DLQGHQAVPE RSAFSPPRRN FSPIVDTDSL AAQGHVLTKI ENSBTAP00000010604/1-558 HTPEGHILRS DLQGHQALPE RSAFSPPRRN FSPVVDTDTL AAQGHVLTKI ENSTTRP00000004631/1-562 HTPEGQISRS DLQGHQAVPE RSAFSPPQRN FLPVVDTDSL AAQGHVLTKI bmy_03764T0/1-655 HTPEGQISRS DLQGHQAVPE RSAFSPPRRN FLPVVDTDSL AAQGHVLTKI BACU009471/1-370 HTPEGQISRS DLQGHQAVPE RSAFSPPRRN FLPVVDTDSL AAQGHVLTKI 551 600 ENSP00000371686/1-561 SKENTRHPLP LRHNPFHSLF QQTLTDKSGP ELKTPFVKEA FEETPKKHRE ENSBTAP00000010604/1-558 SKESTRHPLP LKHNPFHSLF QQTHNDKSGP ELKTSSVKEA FEEAPKKPRE ENSTTRP00000004631/1-562 SKESTRHPLP LKHNPFHSLF QQTLNDKSGP ELKTSSVKEA FEEAPKKPRE bmy_03764T0/1-655 SKESTRHPLP LKHNPFHSLF QQTLNDKSGP ELKTSSVKEA FEEAPKKPRE BACU009471/1-370 SKESTRHPLP LKHNPFHSLF QQTLNDKSGP ELKTSSVKEA FEEAPKKPRE 601 650 ENSP00000371686/1-561 CLVKDNQKYT FTIDRCAKDL FVAKQVGTKL SVNEPLSFSV ESILKRPSSA ENSBTAP00000010604/1-558 CLVKENQKYT FTIDRCAKDL FVAKQVGTKL SVNEPLSFSV ESILKRPSSA ENSTTRP00000004631/1-562 CLVKENQKYT FTIDRCAKDL FVAKQVGTRL SVNEPLSFSV ESILKRPSSA bmy_03764T0/1-655 CLVKENQKYT FTIDRCAKDL FVAKQVGTRL SVNEPLSFSV ESILKRPSSA BACU009471/1-370 CLVKENQKYT FTIDRCAKDL FVAKQVGTRL SVNEPLSFSV ESILKRPSSA 651 700 ENSP00000371686/1-561 ITRVSQ ENSBTAP00000010604/1-558 ITHVSQ ENSTTRP00000004631/1-562 ITHVSQ bmy_03764T0/1-655 ITHVSQ BACU009471/1-370 ITHVSQ